Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:070:088
Extra
PDB:
ATOM 1 O3' G A 69 27.805 154.655 21.905 1.00 48.10 O
ATOM 2 P A A 70 26.714 155.782 21.561 1.00 50.49 P
ATOM 3 OP1 A A 70 25.384 155.312 22.031 1.00 49.89 O
ATOM 4 OP2 A A 70 26.892 156.177 20.139 1.00 53.42 O
ATOM 5 O5' A A 70 27.149 157.020 22.465 1.00 50.28 O
ATOM 6 C5' A A 70 27.315 156.877 23.884 1.00 48.88 C
ATOM 7 C4' A A 70 27.775 158.179 24.495 1.00 48.83 C
ATOM 8 O4' A A 70 29.049 158.566 23.909 1.00 48.64 O
ATOM 9 C3' A A 70 26.850 159.376 24.310 1.00 48.47 C
ATOM 10 O3' A A 70 26.999 160.243 25.422 1.00 49.51 O
ATOM 11 C2' A A 70 27.461 160.078 23.105 1.00 49.33 C
ATOM 12 O2' A A 70 27.153 161.456 23.064 1.00 51.71 O
ATOM 13 C1' A A 70 28.946 159.873 23.386 1.00 48.45 C
ATOM 14 N9 A A 70 29.833 159.984 22.231 1.00 47.65 N
ATOM 15 C8 A A 70 29.685 159.442 20.981 1.00 47.63 C
ATOM 16 N7 A A 70 30.674 159.714 20.167 1.00 47.45 N
ATOM 17 C5 A A 70 31.530 160.493 20.930 1.00 47.90 C
ATOM 18 C6 A A 70 32.765 161.102 20.643 1.00 47.43 C
ATOM 19 N6 A A 70 33.368 161.026 19.456 1.00 46.20 N
ATOM 20 N1 A A 70 33.363 161.804 21.630 1.00 47.75 N
ATOM 21 C2 A A 70 32.751 161.891 22.816 1.00 48.97 C
ATOM 22 N3 A A 70 31.587 161.370 23.205 1.00 50.61 N
ATOM 23 C4 A A 70 31.022 160.671 22.203 1.00 49.06 C
ATOM 24 P G A 71 26.215 159.937 26.782 1.00 52.35 P
ATOM 25 OP1 G A 71 24.958 159.205 26.458 1.00 51.70 O
ATOM 26 OP2 G A 71 26.155 161.200 27.556 1.00 49.24 O
ATOM 27 O5' G A 71 27.173 158.916 27.540 1.00 52.48 O
TER
ATOM 1 O3' G B 87 37.358 159.769 17.783 1.00 57.66 O
ATOM 2 P A B 88 38.701 158.965 18.131 1.00 56.71 P
ATOM 3 OP1 A B 88 39.772 159.371 17.181 1.00 57.99 O
ATOM 4 OP2 A B 88 38.349 157.535 18.257 1.00 57.06 O
ATOM 5 O5' A B 88 39.084 159.508 19.577 1.00 56.08 O
ATOM 6 C5' A B 88 39.865 160.705 19.739 1.00 53.29 C
ATOM 7 C4' A B 88 39.662 161.271 21.122 1.00 52.57 C
ATOM 8 O4' A B 88 38.308 161.785 21.241 1.00 53.09 O
ATOM 9 C3' A B 88 39.776 160.265 22.255 1.00 51.96 C
ATOM 10 O3' A B 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 11 C2' A B 88 38.975 160.944 23.353 1.00 51.94 C
ATOM 12 O2' A B 88 39.691 161.994 23.969 1.00 51.96 O
ATOM 13 C1' A B 88 37.814 161.528 22.548 1.00 51.90 C
ATOM 14 N9 A B 88 36.709 160.576 22.441 1.00 51.35 N
ATOM 15 C8 A B 88 36.304 159.866 21.335 1.00 51.44 C
ATOM 16 N7 A B 88 35.298 159.059 21.564 1.00 52.29 N
ATOM 17 C5 A B 88 35.015 159.252 22.908 1.00 52.62 C
ATOM 18 C6 A B 88 34.056 158.680 23.767 1.00 52.85 C
ATOM 19 N6 A B 88 33.177 157.753 23.384 1.00 54.59 N
ATOM 20 N1 A B 88 34.034 159.097 25.051 1.00 53.12 N
ATOM 21 C2 A B 88 34.924 160.020 25.441 1.00 54.18 C
ATOM 22 N3 A B 88 35.877 160.628 24.731 1.00 53.95 N
ATOM 23 C4 A B 88 35.869 160.193 23.458 1.00 52.64 C
ATOM 24 P A B 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 25 OP1 A B 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 26 OP2 A B 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 27 O5' A B 89 40.590 158.169 24.261 1.00 52.65 O
TER
ATOM 2 P A A 70 26.714 155.782 21.561 1.00 50.49 P
ATOM 3 OP1 A A 70 25.384 155.312 22.031 1.00 49.89 O
ATOM 4 OP2 A A 70 26.892 156.177 20.139 1.00 53.42 O
ATOM 5 O5' A A 70 27.149 157.020 22.465 1.00 50.28 O
ATOM 6 C5' A A 70 27.315 156.877 23.884 1.00 48.88 C
ATOM 7 C4' A A 70 27.775 158.179 24.495 1.00 48.83 C
ATOM 8 O4' A A 70 29.049 158.566 23.909 1.00 48.64 O
ATOM 9 C3' A A 70 26.850 159.376 24.310 1.00 48.47 C
ATOM 10 O3' A A 70 26.999 160.243 25.422 1.00 49.51 O
ATOM 11 C2' A A 70 27.461 160.078 23.105 1.00 49.33 C
ATOM 12 O2' A A 70 27.153 161.456 23.064 1.00 51.71 O
ATOM 13 C1' A A 70 28.946 159.873 23.386 1.00 48.45 C
ATOM 14 N9 A A 70 29.833 159.984 22.231 1.00 47.65 N
ATOM 15 C8 A A 70 29.685 159.442 20.981 1.00 47.63 C
ATOM 16 N7 A A 70 30.674 159.714 20.167 1.00 47.45 N
ATOM 17 C5 A A 70 31.530 160.493 20.930 1.00 47.90 C
ATOM 18 C6 A A 70 32.765 161.102 20.643 1.00 47.43 C
ATOM 19 N6 A A 70 33.368 161.026 19.456 1.00 46.20 N
ATOM 20 N1 A A 70 33.363 161.804 21.630 1.00 47.75 N
ATOM 21 C2 A A 70 32.751 161.891 22.816 1.00 48.97 C
ATOM 22 N3 A A 70 31.587 161.370 23.205 1.00 50.61 N
ATOM 23 C4 A A 70 31.022 160.671 22.203 1.00 49.06 C
ATOM 24 P G A 71 26.215 159.937 26.782 1.00 52.35 P
ATOM 25 OP1 G A 71 24.958 159.205 26.458 1.00 51.70 O
ATOM 26 OP2 G A 71 26.155 161.200 27.556 1.00 49.24 O
ATOM 27 O5' G A 71 27.173 158.916 27.540 1.00 52.48 O
TER
ATOM 1 O3' G B 87 37.358 159.769 17.783 1.00 57.66 O
ATOM 2 P A B 88 38.701 158.965 18.131 1.00 56.71 P
ATOM 3 OP1 A B 88 39.772 159.371 17.181 1.00 57.99 O
ATOM 4 OP2 A B 88 38.349 157.535 18.257 1.00 57.06 O
ATOM 5 O5' A B 88 39.084 159.508 19.577 1.00 56.08 O
ATOM 6 C5' A B 88 39.865 160.705 19.739 1.00 53.29 C
ATOM 7 C4' A B 88 39.662 161.271 21.122 1.00 52.57 C
ATOM 8 O4' A B 88 38.308 161.785 21.241 1.00 53.09 O
ATOM 9 C3' A B 88 39.776 160.265 22.255 1.00 51.96 C
ATOM 10 O3' A B 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 11 C2' A B 88 38.975 160.944 23.353 1.00 51.94 C
ATOM 12 O2' A B 88 39.691 161.994 23.969 1.00 51.96 O
ATOM 13 C1' A B 88 37.814 161.528 22.548 1.00 51.90 C
ATOM 14 N9 A B 88 36.709 160.576 22.441 1.00 51.35 N
ATOM 15 C8 A B 88 36.304 159.866 21.335 1.00 51.44 C
ATOM 16 N7 A B 88 35.298 159.059 21.564 1.00 52.29 N
ATOM 17 C5 A B 88 35.015 159.252 22.908 1.00 52.62 C
ATOM 18 C6 A B 88 34.056 158.680 23.767 1.00 52.85 C
ATOM 19 N6 A B 88 33.177 157.753 23.384 1.00 54.59 N
ATOM 20 N1 A B 88 34.034 159.097 25.051 1.00 53.12 N
ATOM 21 C2 A B 88 34.924 160.020 25.441 1.00 54.18 C
ATOM 22 N3 A B 88 35.877 160.628 24.731 1.00 53.95 N
ATOM 23 C4 A B 88 35.869 160.193 23.458 1.00 52.64 C
ATOM 24 P A B 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 25 OP1 A B 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 26 OP2 A B 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 27 O5' A B 89 40.590 158.169 24.261 1.00 52.65 O
TER
Atoms:
OP1: (25.384,155.312,22.031)
OP2: (26.892,156.177,20.139)
C3': (26.850,159.376,24.310)
C1': (28.946,159.873,23.386)
C5': (27.315,156.877,23.884)
O4': (29.049,158.566,23.909)
C8: (29.685,159.442,20.981)
O2': (27.153,161.456,23.064)
C6: (32.765,161.102,20.643)
C5: (31.530,160.493,20.930)
C4: (31.022,160.671,22.203)
P: (26.714,155.782,21.561)
C4': (27.775,158.179,24.495)
C2': (27.461,160.078,23.105)
C2: (32.751,161.891,22.816)
N1: (33.363,161.804,21.630)
N3: (31.587,161.370,23.205)
N6: (33.368,161.026,19.456)
N7: (30.674,159.714,20.167)
N9: (29.833,159.984,22.231)
O5': (27.149,157.020,22.465)
O3': (26.999,160.243,25.422)
OP2: (26.892,156.177,20.139)
C3': (26.850,159.376,24.310)
C1': (28.946,159.873,23.386)
C5': (27.315,156.877,23.884)
O4': (29.049,158.566,23.909)
C8: (29.685,159.442,20.981)
O2': (27.153,161.456,23.064)
C6: (32.765,161.102,20.643)
C5: (31.530,160.493,20.930)
C4: (31.022,160.671,22.203)
P: (26.714,155.782,21.561)
C4': (27.775,158.179,24.495)
C2': (27.461,160.078,23.105)
C2: (32.751,161.891,22.816)
N1: (33.363,161.804,21.630)
N3: (31.587,161.370,23.205)
N6: (33.368,161.026,19.456)
N7: (30.674,159.714,20.167)
N9: (29.833,159.984,22.231)
O5': (27.149,157.020,22.465)
O3': (26.999,160.243,25.422)
OP1: (39.772,159.371,17.181)
OP2: (38.349,157.535,18.257)
C3': (39.776,160.265,22.255)
C1': (37.814,161.528,22.548)
C5': (39.865,160.705,19.739)
O4': (38.308,161.785,21.241)
C8: (36.304,159.866,21.335)
O2': (39.691,161.994,23.969)
C6: (34.056,158.680,23.767)
C5: (35.015,159.252,22.908)
C4: (35.869,160.193,23.458)
P: (38.701,158.965,18.131)
C4': (39.662,161.271,21.122)
C2': (38.975,160.944,23.353)
C2: (34.924,160.020,25.441)
N1: (34.034,159.097,25.051)
N3: (35.877,160.628,24.731)
N6: (33.177,157.753,23.384)
N7: (35.298,159.059,21.564)
N9: (36.709,160.576,22.441)
O5': (39.084,159.508,19.577)
O3': (41.123,160.011,22.630)
OP2: (38.349,157.535,18.257)
C3': (39.776,160.265,22.255)
C1': (37.814,161.528,22.548)
C5': (39.865,160.705,19.739)
O4': (38.308,161.785,21.241)
C8: (36.304,159.866,21.335)
O2': (39.691,161.994,23.969)
C6: (34.056,158.680,23.767)
C5: (35.015,159.252,22.908)
C4: (35.869,160.193,23.458)
P: (38.701,158.965,18.131)
C4': (39.662,161.271,21.122)
C2': (38.975,160.944,23.353)
C2: (34.924,160.020,25.441)
N1: (34.034,159.097,25.051)
N3: (35.877,160.628,24.731)
N6: (33.177,157.753,23.384)
N7: (35.298,159.059,21.564)
N9: (36.709,160.576,22.441)
O5': (39.084,159.508,19.577)
O3': (41.123,160.011,22.630)
Image (generated by PyMOL):