ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0317:0335

Extra

PDB:
ATOM 1 O3' U A 316 18.341 123.709 21.478 1.00 45.07 O
ATOM 2 P A A 317 17.846 123.604 23.006 1.00 45.04 P
ATOM 3 OP1 A A 317 18.680 122.535 23.609 1.00 45.16 O
ATOM 4 OP2 A A 317 16.370 123.477 23.038 1.00 44.29 O
ATOM 5 O5' A A 317 18.207 125.018 23.657 1.00 44.47 O
ATOM 6 C5' A A 317 19.423 125.210 24.417 1.00 43.23 C
ATOM 7 C4' A A 317 19.467 126.607 25.001 1.00 42.93 C
ATOM 8 O4' A A 317 19.383 127.584 23.925 1.00 45.43 O
ATOM 9 C3' A A 317 18.338 126.963 25.961 1.00 42.68 C
ATOM 10 O3' A A 317 18.789 127.994 26.847 1.00 42.65 O
ATOM 11 C2' A A 317 17.320 127.596 25.023 1.00 43.46 C
ATOM 12 O2' A A 317 16.404 128.423 25.705 1.00 40.64 O
ATOM 13 C1' A A 317 18.250 128.408 24.122 1.00 46.02 C
ATOM 14 N9 A A 317 17.735 128.818 22.812 1.00 48.83 N
ATOM 15 C8 A A 317 17.029 128.079 21.894 1.00 49.81 C
ATOM 16 N7 A A 317 16.729 128.740 20.800 1.00 50.66 N
ATOM 17 C5 A A 317 17.272 130.001 21.012 1.00 50.96 C
ATOM 18 C6 A A 317 17.302 131.169 20.221 1.00 50.21 C
ATOM 19 N6 A A 317 16.768 131.254 19.001 1.00 48.81 N
ATOM 20 N1 A A 317 17.916 132.257 20.732 1.00 49.27 N
ATOM 21 C2 A A 317 18.467 132.170 21.941 1.00 49.23 C
ATOM 22 N3 A A 317 18.514 131.134 22.775 1.00 50.96 N
ATOM 23 C4 A A 317 17.890 130.066 22.247 1.00 50.29 C
ATOM 24 P C A 318 19.525 127.624 28.230 1.00 43.16 P
ATOM 25 OP1 C A 318 19.398 128.832 29.086 1.00 42.90 O
ATOM 26 OP2 C A 318 20.872 127.061 27.949 1.00 40.54 O
ATOM 27 O5' C A 318 18.634 126.470 28.879 1.00 43.27 O
TER

ATOM 1 O3' U B 334 25.662 128.031 25.790 1.00 45.65 O
ATOM 2 P A B 335 26.065 127.575 24.305 1.00 47.50 P
ATOM 3 OP1 A B 335 26.903 126.355 24.402 1.00 47.94 O
ATOM 4 OP2 A B 335 26.576 128.762 23.576 1.00 47.08 O
ATOM 5 O5' A B 335 24.676 127.151 23.654 1.00 50.55 O
ATOM 6 C5' A B 335 24.020 125.929 24.041 1.00 50.46 C
ATOM 7 C4' A B 335 22.968 125.550 23.024 1.00 50.78 C
ATOM 8 O4' A B 335 21.897 126.529 23.026 1.00 51.15 O
ATOM 9 C3' A B 335 23.433 125.516 21.581 1.00 50.01 C
ATOM 10 O3' A B 335 24.087 124.294 21.278 1.00 48.42 O
ATOM 11 C2' A B 335 22.128 125.684 20.819 1.00 50.98 C
ATOM 12 O2' A B 335 21.394 124.478 20.748 1.00 52.29 O
ATOM 13 C1' A B 335 21.386 126.679 21.714 1.00 51.20 C
ATOM 14 N9 A B 335 21.563 128.074 21.314 1.00 52.61 N
ATOM 15 C8 A B 335 22.437 128.996 21.831 1.00 52.69 C
ATOM 16 N7 A B 335 22.357 130.174 21.266 1.00 53.35 N
ATOM 17 C5 A B 335 21.366 130.020 20.309 1.00 53.38 C
ATOM 18 C6 A B 335 20.813 130.904 19.370 1.00 52.90 C
ATOM 19 N6 A B 335 21.191 132.172 19.233 1.00 54.05 N
ATOM 20 N1 A B 335 19.844 130.434 18.563 1.00 53.16 N
ATOM 21 C2 A B 335 19.463 129.162 18.695 1.00 53.85 C
ATOM 22 N3 A B 335 19.903 128.234 19.536 1.00 53.96 N
ATOM 23 C4 A B 335 20.867 128.732 20.327 1.00 53.93 C
ATOM 24 P C B 336 25.243 124.273 20.169 1.00 47.59 P
ATOM 25 OP1 C B 336 25.648 122.861 19.966 1.00 46.39 O
ATOM 26 OP2 C B 336 26.259 125.277 20.553 1.00 48.59 O
ATOM 27 O5' C B 336 24.512 124.793 18.854 1.00 49.52 O
TER

Atoms:
OP1: (18.680,122.535,23.609)
OP2: (16.370,123.477,23.038)
C3': (18.338,126.963,25.961)
C1': (18.250,128.408,24.122)
C5': (19.423,125.210,24.417)
O4': (19.383,127.584,23.925)
C8: (17.029,128.079,21.894)
O2': (16.404,128.423,25.705)
C6: (17.302,131.169,20.221)
C5: (17.272,130.001,21.012)
C4: (17.890,130.066,22.247)
P: (17.846,123.604,23.006)
C4': (19.467,126.607,25.001)
C2': (17.320,127.596,25.023)
C2: (18.467,132.170,21.941)
N1: (17.916,132.257,20.732)
N3: (18.514,131.134,22.775)
N6: (16.768,131.254,19.001)
N7: (16.729,128.740,20.800)
N9: (17.735,128.818,22.812)
O5': (18.207,125.018,23.657)
O3': (18.789,127.994,26.847)
OP1: (26.903,126.355,24.402)
OP2: (26.576,128.762,23.576)
C3': (23.433,125.516,21.581)
C1': (21.386,126.679,21.714)
C5': (24.020,125.929,24.041)
O4': (21.897,126.529,23.026)
C8: (22.437,128.996,21.831)
O2': (21.394,124.478,20.748)
C6: (20.813,130.904,19.370)
C5: (21.366,130.020,20.309)
C4: (20.867,128.732,20.327)
P: (26.065,127.575,24.305)
C4': (22.968,125.550,23.024)
C2': (22.128,125.684,20.819)
C2: (19.463,129.162,18.695)
N1: (19.844,130.434,18.563)
N3: (19.903,128.234,19.536)
N6: (21.191,132.172,19.233)
N7: (22.357,130.174,21.266)
N9: (21.563,128.074,21.314)
O5': (24.676,127.151,23.654)
O3': (24.087,124.294,21.278)
Image (generated by PyMOL):
PyMOL image
show in jmol