Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1226:A1263
Extra
PDB:
ATOM 1 O3' C A1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 2 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 3 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 4 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 5 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
ATOM 6 C5' A A1226 -106.607 122.461 53.750 1.00 75.15 C
ATOM 7 C4' A A1226 -105.158 122.234 54.104 1.00 73.15 C
ATOM 8 O4' A A1226 -104.943 122.547 55.501 1.00 71.72 O
ATOM 9 C3' A A1226 -104.685 120.798 53.957 1.00 72.68 C
ATOM 10 O3' A A1226 -104.278 120.572 52.612 1.00 73.04 O
ATOM 11 C2' A A1226 -103.512 120.729 54.928 1.00 71.57 C
ATOM 12 O2' A A1226 -102.316 121.246 54.382 1.00 72.48 O
ATOM 13 C1' A A1226 -103.974 121.667 56.042 1.00 69.93 C
ATOM 14 N9 A A1226 -104.554 120.969 57.191 1.00 31.74 N
ATOM 15 C8 A A1226 -105.881 120.851 57.540 1.00 30.55 C
ATOM 16 N7 A A1226 -106.080 120.172 58.645 1.00 29.61 N
ATOM 17 C5 A A1226 -104.800 119.813 59.051 1.00 29.62 C
ATOM 18 C6 A A1226 -104.330 119.072 60.152 1.00 29.14 C
ATOM 19 N6 A A1226 -105.128 118.534 61.084 1.00 29.06 N
ATOM 20 N1 A A1226 -102.994 118.896 60.259 1.00 28.92 N
ATOM 21 C2 A A1226 -102.195 119.423 59.315 1.00 30.08 C
ATOM 22 N3 A A1226 -102.518 120.129 58.236 1.00 30.15 N
ATOM 23 C4 A A1226 -103.851 120.293 58.161 1.00 30.76 C
ATOM 24 P A A1227 -104.494 119.130 51.932 1.00100.11 P
ATOM 25 OP1 A A1227 -104.139 119.326 50.499 1.00 20.27 O
ATOM 26 OP2 A A1227 -105.823 118.570 52.294 1.00 21.48 O
ATOM 27 O5' A A1227 -103.389 118.209 52.611 1.00 92.36 O
TER
ATOM 1 O3' A B1262 -114.184 122.772 62.174 1.00 94.87 O
ATOM 2 P A B1263 -113.148 123.285 61.062 1.00 85.79 P
ATOM 3 OP1 A B1263 -113.484 124.695 60.755 1.00 96.90 O
ATOM 4 OP2 A B1263 -113.114 122.280 59.964 1.00 97.38 O
ATOM 5 O5' A B1263 -111.754 123.272 61.835 1.00 66.21 O
ATOM 6 C5' A B1263 -110.600 122.613 61.288 1.00 62.74 C
ATOM 7 C4' A B1263 -109.721 122.062 62.396 1.00 59.84 C
ATOM 8 O4' A B1263 -108.597 121.394 61.771 1.00 58.24 O
ATOM 9 C3' A B1263 -109.114 123.101 63.332 1.00 58.22 C
ATOM 10 O3' A B1263 -109.963 123.294 64.475 1.00 57.33 O
ATOM 11 C2' A B1263 -107.774 122.481 63.723 1.00 57.22 C
ATOM 12 O2' A B1263 -107.872 121.581 64.808 1.00 57.79 O
ATOM 13 C1' A B1263 -107.405 121.689 62.467 1.00 56.10 C
ATOM 14 N9 A B1263 -106.499 122.355 61.526 1.00 38.27 N
ATOM 15 C8 A B1263 -106.838 123.213 60.513 1.00 36.58 C
ATOM 16 N7 A B1263 -105.818 123.610 59.791 1.00 35.67 N
ATOM 17 C5 A B1263 -104.732 122.982 60.376 1.00 35.99 C
ATOM 18 C6 A B1263 -103.357 122.991 60.073 1.00 35.65 C
ATOM 19 N6 A B1263 -102.819 123.684 59.068 1.00 34.98 N
ATOM 20 N1 A B1263 -102.540 122.258 60.851 1.00 36.27 N
ATOM 21 C2 A B1263 -103.075 121.570 61.865 1.00 36.60 C
ATOM 22 N3 A B1263 -104.347 121.483 62.252 1.00 36.83 N
ATOM 23 C4 A B1263 -105.134 122.218 61.455 1.00 37.31 C
ATOM 24 P A B1264 -110.043 124.737 65.202 1.00 50.60 P
ATOM 25 OP1 A B1264 -110.978 124.590 66.359 1.00 32.82 O
ATOM 26 OP2 A B1264 -110.265 125.819 64.196 1.00 34.18 O
ATOM 27 O5' A B1264 -108.585 124.964 65.778 1.00 48.69 O
TER
ATOM 2 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 3 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 4 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 5 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
ATOM 6 C5' A A1226 -106.607 122.461 53.750 1.00 75.15 C
ATOM 7 C4' A A1226 -105.158 122.234 54.104 1.00 73.15 C
ATOM 8 O4' A A1226 -104.943 122.547 55.501 1.00 71.72 O
ATOM 9 C3' A A1226 -104.685 120.798 53.957 1.00 72.68 C
ATOM 10 O3' A A1226 -104.278 120.572 52.612 1.00 73.04 O
ATOM 11 C2' A A1226 -103.512 120.729 54.928 1.00 71.57 C
ATOM 12 O2' A A1226 -102.316 121.246 54.382 1.00 72.48 O
ATOM 13 C1' A A1226 -103.974 121.667 56.042 1.00 69.93 C
ATOM 14 N9 A A1226 -104.554 120.969 57.191 1.00 31.74 N
ATOM 15 C8 A A1226 -105.881 120.851 57.540 1.00 30.55 C
ATOM 16 N7 A A1226 -106.080 120.172 58.645 1.00 29.61 N
ATOM 17 C5 A A1226 -104.800 119.813 59.051 1.00 29.62 C
ATOM 18 C6 A A1226 -104.330 119.072 60.152 1.00 29.14 C
ATOM 19 N6 A A1226 -105.128 118.534 61.084 1.00 29.06 N
ATOM 20 N1 A A1226 -102.994 118.896 60.259 1.00 28.92 N
ATOM 21 C2 A A1226 -102.195 119.423 59.315 1.00 30.08 C
ATOM 22 N3 A A1226 -102.518 120.129 58.236 1.00 30.15 N
ATOM 23 C4 A A1226 -103.851 120.293 58.161 1.00 30.76 C
ATOM 24 P A A1227 -104.494 119.130 51.932 1.00100.11 P
ATOM 25 OP1 A A1227 -104.139 119.326 50.499 1.00 20.27 O
ATOM 26 OP2 A A1227 -105.823 118.570 52.294 1.00 21.48 O
ATOM 27 O5' A A1227 -103.389 118.209 52.611 1.00 92.36 O
TER
ATOM 1 O3' A B1262 -114.184 122.772 62.174 1.00 94.87 O
ATOM 2 P A B1263 -113.148 123.285 61.062 1.00 85.79 P
ATOM 3 OP1 A B1263 -113.484 124.695 60.755 1.00 96.90 O
ATOM 4 OP2 A B1263 -113.114 122.280 59.964 1.00 97.38 O
ATOM 5 O5' A B1263 -111.754 123.272 61.835 1.00 66.21 O
ATOM 6 C5' A B1263 -110.600 122.613 61.288 1.00 62.74 C
ATOM 7 C4' A B1263 -109.721 122.062 62.396 1.00 59.84 C
ATOM 8 O4' A B1263 -108.597 121.394 61.771 1.00 58.24 O
ATOM 9 C3' A B1263 -109.114 123.101 63.332 1.00 58.22 C
ATOM 10 O3' A B1263 -109.963 123.294 64.475 1.00 57.33 O
ATOM 11 C2' A B1263 -107.774 122.481 63.723 1.00 57.22 C
ATOM 12 O2' A B1263 -107.872 121.581 64.808 1.00 57.79 O
ATOM 13 C1' A B1263 -107.405 121.689 62.467 1.00 56.10 C
ATOM 14 N9 A B1263 -106.499 122.355 61.526 1.00 38.27 N
ATOM 15 C8 A B1263 -106.838 123.213 60.513 1.00 36.58 C
ATOM 16 N7 A B1263 -105.818 123.610 59.791 1.00 35.67 N
ATOM 17 C5 A B1263 -104.732 122.982 60.376 1.00 35.99 C
ATOM 18 C6 A B1263 -103.357 122.991 60.073 1.00 35.65 C
ATOM 19 N6 A B1263 -102.819 123.684 59.068 1.00 34.98 N
ATOM 20 N1 A B1263 -102.540 122.258 60.851 1.00 36.27 N
ATOM 21 C2 A B1263 -103.075 121.570 61.865 1.00 36.60 C
ATOM 22 N3 A B1263 -104.347 121.483 62.252 1.00 36.83 N
ATOM 23 C4 A B1263 -105.134 122.218 61.455 1.00 37.31 C
ATOM 24 P A B1264 -110.043 124.737 65.202 1.00 50.60 P
ATOM 25 OP1 A B1264 -110.978 124.590 66.359 1.00 32.82 O
ATOM 26 OP2 A B1264 -110.265 125.819 64.196 1.00 34.18 O
ATOM 27 O5' A B1264 -108.585 124.964 65.778 1.00 48.69 O
TER
Atoms:
OP1: (-107.545,123.944,51.208)
OP2: (-109.307,123.995,53.090)
C3': (-104.685,120.798,53.957)
C1': (-103.974,121.667,56.042)
C5': (-106.607,122.461,53.750)
O4': (-104.943,122.547,55.501)
C8: (-105.881,120.851,57.540)
O2': (-102.316,121.246,54.382)
C6: (-104.330,119.072,60.152)
C5: (-104.800,119.813,59.051)
C4: (-103.851,120.293,58.161)
P: (-107.963,124.380,52.566)
C4': (-105.158,122.234,54.104)
C2': (-103.512,120.729,54.928)
C2: (-102.195,119.423,59.315)
N1: (-102.994,118.896,60.259)
N3: (-102.518,120.129,58.236)
N6: (-105.128,118.534,61.084)
N7: (-106.080,120.172,58.645)
N9: (-104.554,120.969,57.191)
O5': (-106.874,123.867,53.611)
O3': (-104.278,120.572,52.612)
OP2: (-109.307,123.995,53.090)
C3': (-104.685,120.798,53.957)
C1': (-103.974,121.667,56.042)
C5': (-106.607,122.461,53.750)
O4': (-104.943,122.547,55.501)
C8: (-105.881,120.851,57.540)
O2': (-102.316,121.246,54.382)
C6: (-104.330,119.072,60.152)
C5: (-104.800,119.813,59.051)
C4: (-103.851,120.293,58.161)
P: (-107.963,124.380,52.566)
C4': (-105.158,122.234,54.104)
C2': (-103.512,120.729,54.928)
C2: (-102.195,119.423,59.315)
N1: (-102.994,118.896,60.259)
N3: (-102.518,120.129,58.236)
N6: (-105.128,118.534,61.084)
N7: (-106.080,120.172,58.645)
N9: (-104.554,120.969,57.191)
O5': (-106.874,123.867,53.611)
O3': (-104.278,120.572,52.612)
OP1: (-113.484,124.695,60.755)
OP2: (-113.114,122.280,59.964)
C3': (-109.114,123.101,63.332)
C1': (-107.405,121.689,62.467)
C5': (-110.600,122.613,61.288)
O4': (-108.597,121.394,61.771)
C8: (-106.838,123.213,60.513)
O2': (-107.872,121.581,64.808)
C6: (-103.357,122.991,60.073)
C5: (-104.732,122.982,60.376)
C4: (-105.134,122.218,61.455)
P: (-113.148,123.285,61.062)
C4': (-109.721,122.062,62.396)
C2': (-107.774,122.481,63.723)
C2: (-103.075,121.570,61.865)
N1: (-102.540,122.258,60.851)
N3: (-104.347,121.483,62.252)
N6: (-102.819,123.684,59.068)
N7: (-105.818,123.610,59.791)
N9: (-106.499,122.355,61.526)
O5': (-111.754,123.272,61.835)
O3': (-109.963,123.294,64.475)
OP2: (-113.114,122.280,59.964)
C3': (-109.114,123.101,63.332)
C1': (-107.405,121.689,62.467)
C5': (-110.600,122.613,61.288)
O4': (-108.597,121.394,61.771)
C8: (-106.838,123.213,60.513)
O2': (-107.872,121.581,64.808)
C6: (-103.357,122.991,60.073)
C5: (-104.732,122.982,60.376)
C4: (-105.134,122.218,61.455)
P: (-113.148,123.285,61.062)
C4': (-109.721,122.062,62.396)
C2': (-107.774,122.481,63.723)
C2: (-103.075,121.570,61.865)
N1: (-102.540,122.258,60.851)
N3: (-104.347,121.483,62.252)
N6: (-102.819,123.684,59.068)
N7: (-105.818,123.610,59.791)
N9: (-106.499,122.355,61.526)
O5': (-111.754,123.272,61.835)
O3': (-109.963,123.294,64.475)
Image (generated by PyMOL):