ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A225:A236

Extra

PDB:
ATOM 1 O3' U A 224 166.583 -39.226-142.746 1.00 37.23 O
ATOM 2 P A A 225 165.984 -39.814-144.119 1.00 64.71 P
ATOM 3 OP1 A A 225 164.565 -39.372-144.189 1.00 67.94 O
ATOM 4 OP2 A A 225 166.282 -41.276-144.144 1.00 59.47 O
ATOM 5 O5' A A 225 166.847 -39.069-145.244 1.00 48.21 O
ATOM 6 C5' A A 225 166.950 -37.654-145.281 1.00 44.55 C
ATOM 7 C4' A A 225 167.822 -37.207-146.426 1.00 47.93 C
ATOM 8 O4' A A 225 169.215 -37.426-146.107 1.00 56.28 O
ATOM 9 C3' A A 225 167.629 -37.951-147.725 1.00 47.77 C
ATOM 10 O3' A A 225 166.516 -37.478-148.446 1.00 52.28 O
ATOM 11 C2' A A 225 168.959 -37.748-148.449 1.00 47.86 C
ATOM 12 O2' A A 225 168.961 -36.528-149.175 1.00 65.74 O
ATOM 13 C1' A A 225 169.951 -37.622-147.292 1.00 45.19 C
ATOM 14 N9 A A 225 170.788 -38.821-147.146 1.00 50.01 N
ATOM 15 C8 A A 225 170.572 -39.917-146.339 1.00 53.03 C
ATOM 16 N7 A A 225 171.505 -40.848-146.428 1.00 50.58 N
ATOM 17 C5 A A 225 172.384 -40.311-147.358 1.00 52.87 C
ATOM 18 C6 A A 225 173.582 -40.821-147.872 1.00 55.44 C
ATOM 19 N6 A A 225 174.030 -42.030-147.467 1.00 51.30 N
ATOM 20 N1 A A 225 174.255 -40.046-148.788 1.00 47.70 N
ATOM 21 C2 A A 225 173.722 -38.867-149.144 1.00 43.41 C
ATOM 22 N3 A A 225 172.606 -38.277-148.713 1.00 46.30 N
ATOM 23 C4 A A 225 171.973 -39.059-147.811 1.00 52.50 C
ATOM 24 P G A 226 165.687 -38.471-149.398 1.00 54.71 P
ATOM 25 OP1 G A 226 164.561 -37.686-149.960 1.00 64.51 O
ATOM 26 OP2 G A 226 165.385 -39.706-148.610 1.00 49.51 O
ATOM 27 O5' G A 226 166.732 -38.797-150.541 1.00 42.67 O
TER

ATOM 1 O3' G B 235 179.187 -43.822-145.708 1.00 39.08 O
ATOM 2 P A B 236 179.464 -42.985-144.361 1.00 52.02 P
ATOM 3 OP1 A B 236 180.885 -42.568-144.403 1.00 43.67 O
ATOM 4 OP2 A B 236 178.992 -43.806-143.217 1.00 50.01 O
ATOM 5 O5' A B 236 178.515 -41.712-144.525 1.00 50.10 O
ATOM 6 C5' A B 236 179.060 -40.414-144.726 1.00 47.32 C
ATOM 7 C4' A B 236 179.151 -40.080-146.191 1.00 45.54 C
ATOM 8 O4' A B 236 177.899 -40.435-146.846 1.00 49.14 O
ATOM 9 C3' A B 236 179.370 -38.602-146.528 1.00 43.28 C
ATOM 10 O3' A B 236 180.742 -38.239-146.530 1.00 39.56 O
ATOM 11 C2' A B 236 178.718 -38.483-147.897 1.00 52.42 C
ATOM 12 O2' A B 236 179.561 -39.049-148.906 1.00 49.10 O
ATOM 13 C1' A B 236 177.503 -39.398-147.716 1.00 51.00 C
ATOM 14 N9 A B 236 176.367 -38.691-147.089 1.00 45.63 N
ATOM 15 C8 A B 236 175.791 -39.017-145.894 1.00 50.03 C
ATOM 16 N7 A B 236 174.807 -38.230-145.529 1.00 52.33 N
ATOM 17 C5 A B 236 174.728 -37.320-146.565 1.00 46.27 C
ATOM 18 C6 A B 236 173.884 -36.226-146.770 1.00 43.81 C
ATOM 19 N6 A B 236 172.920 -35.863-145.926 1.00 49.61 N
ATOM 20 N1 A B 236 174.063 -35.494-147.876 1.00 39.09 N
ATOM 21 C2 A B 236 175.028 -35.869-148.723 1.00 47.88 C
ATOM 22 N3 A B 236 175.890 -36.879-148.648 1.00 49.85 N
ATOM 23 C4 A B 236 175.687 -37.580-147.523 1.00 45.81 C
ATOM 24 P A B 237 181.297 -37.062-145.569 1.00 60.93 P
ATOM 25 OP1 A B 237 182.777 -37.020-145.751 1.00 49.18 O
ATOM 26 OP2 A B 237 180.751 -37.296-144.186 1.00 49.74 O
ATOM 27 O5' A B 237 180.637 -35.760-146.207 1.00 56.09 O
TER

Atoms:
OP1: (164.565,-39.372,-144.189)
OP2: (166.282,-41.276,-144.144)
C3': (167.629,-37.951,-147.725)
C1': (169.951,-37.622,-147.292)
C5': (166.950,-37.654,-145.281)
O4': (169.215,-37.426,-146.107)
C8: (170.572,-39.917,-146.339)
O2': (168.961,-36.528,-149.175)
C6: (173.582,-40.821,-147.872)
C5: (172.384,-40.311,-147.358)
C4: (171.973,-39.059,-147.811)
P: (165.984,-39.814,-144.119)
C4': (167.822,-37.207,-146.426)
C2': (168.959,-37.748,-148.449)
C2: (173.722,-38.867,-149.144)
N1: (174.255,-40.046,-148.788)
N3: (172.606,-38.277,-148.713)
N6: (174.030,-42.030,-147.467)
N7: (171.505,-40.848,-146.428)
N9: (170.788,-38.821,-147.146)
O5': (166.847,-39.069,-145.244)
O3': (166.516,-37.478,-148.446)
OP1: (180.885,-42.568,-144.403)
OP2: (178.992,-43.806,-143.217)
C3': (179.370,-38.602,-146.528)
C1': (177.503,-39.398,-147.716)
C5': (179.060,-40.414,-144.726)
O4': (177.899,-40.435,-146.846)
C8: (175.791,-39.017,-145.894)
O2': (179.561,-39.049,-148.906)
C6: (173.884,-36.226,-146.770)
C5: (174.728,-37.320,-146.565)
C4: (175.687,-37.580,-147.523)
P: (179.464,-42.985,-144.361)
C4': (179.151,-40.080,-146.191)
C2': (178.718,-38.483,-147.897)
C2: (175.028,-35.869,-148.723)
N1: (174.063,-35.494,-147.876)
N3: (175.890,-36.879,-148.648)
N6: (172.920,-35.863,-145.926)
N7: (174.807,-38.230,-145.529)
N9: (176.367,-38.691,-147.089)
O5': (178.515,-41.712,-144.525)
O3': (180.742,-38.239,-146.530)
Image (generated by PyMOL):
PyMOL image
show in jmol