ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0317:0335

Extra

PDB:
ATOM 1 O3' U A 316 18.574 124.123 21.791 1.00 55.97 O
ATOM 2 P A A 317 18.125 124.102 23.342 1.00 54.06 P
ATOM 3 OP1 A A 317 19.012 123.096 23.987 1.00 55.10 O
ATOM 4 OP2 A A 317 16.652 123.944 23.427 1.00 50.66 O
ATOM 5 O5' A A 317 18.487 125.556 23.903 1.00 54.20 O
ATOM 6 C5' A A 317 19.641 125.760 24.760 1.00 51.76 C
ATOM 7 C4' A A 317 19.609 127.138 25.391 1.00 50.54 C
ATOM 8 O4' A A 317 19.521 128.137 24.337 1.00 52.49 O
ATOM 9 C3' A A 317 18.453 127.435 26.343 1.00 49.31 C
ATOM 10 O3' A A 317 18.848 128.446 27.281 1.00 49.71 O
ATOM 11 C2' A A 317 17.444 128.095 25.413 1.00 49.49 C
ATOM 12 O2' A A 317 16.524 128.919 26.101 1.00 46.13 O
ATOM 13 C1' A A 317 18.376 128.935 24.540 1.00 51.62 C
ATOM 14 N9 A A 317 17.859 129.340 23.234 1.00 54.59 N
ATOM 15 C8 A A 317 17.134 128.602 22.331 1.00 54.37 C
ATOM 16 N7 A A 317 16.829 129.256 21.240 1.00 55.98 N
ATOM 17 C5 A A 317 17.392 130.509 21.432 1.00 57.02 C
ATOM 18 C6 A A 317 17.427 131.666 20.629 1.00 57.85 C
ATOM 19 N6 A A 317 16.872 131.742 19.416 1.00 56.24 N
ATOM 20 N1 A A 317 18.064 132.752 21.121 1.00 57.75 N
ATOM 21 C2 A A 317 18.628 132.671 22.329 1.00 57.29 C
ATOM 22 N3 A A 317 18.669 131.641 23.173 1.00 58.19 N
ATOM 23 C4 A A 317 18.024 130.577 22.658 1.00 57.00 C
ATOM 24 P C A 318 19.653 128.062 28.625 1.00 48.63 P
ATOM 25 OP1 C A 318 19.613 129.306 29.437 1.00 45.99 O
ATOM 26 OP2 C A 318 20.966 127.445 28.288 1.00 42.61 O
ATOM 27 O5' C A 318 18.761 126.941 29.332 1.00 49.01 O
TER

ATOM 1 O3' U B 334 25.900 128.581 26.099 1.00 50.31 O
ATOM 2 P A B 335 26.331 128.112 24.627 1.00 52.72 P
ATOM 3 OP1 A B 335 27.261 126.964 24.763 1.00 53.57 O
ATOM 4 OP2 A B 335 26.753 129.304 23.846 1.00 54.01 O
ATOM 5 O5' A B 335 24.971 127.584 23.989 1.00 54.58 O
ATOM 6 C5' A B 335 24.402 126.326 24.388 1.00 55.30 C
ATOM 7 C4' A B 335 23.320 125.912 23.416 1.00 57.75 C
ATOM 8 O4' A B 335 22.231 126.876 23.450 1.00 57.76 O
ATOM 9 C3' A B 335 23.725 125.871 21.952 1.00 57.59 C
ATOM 10 O3' A B 335 24.419 124.668 21.622 1.00 58.55 O
ATOM 11 C2' A B 335 22.381 126.005 21.247 1.00 57.05 C
ATOM 12 O2' A B 335 21.651 124.798 21.229 1.00 59.01 O
ATOM 13 C1' A B 335 21.656 126.996 22.160 1.00 57.00 C
ATOM 14 N9 A B 335 21.770 128.391 21.726 1.00 57.45 N
ATOM 15 C8 A B 335 22.634 129.354 22.182 1.00 57.19 C
ATOM 16 N7 A B 335 22.490 130.517 21.598 1.00 56.78 N
ATOM 17 C5 A B 335 21.464 130.308 20.688 1.00 57.56 C
ATOM 18 C6 A B 335 20.837 131.155 19.751 1.00 56.26 C
ATOM 19 N6 A B 335 21.162 132.434 19.564 1.00 54.80 N
ATOM 20 N1 A B 335 19.847 130.631 19.002 1.00 57.48 N
ATOM 21 C2 A B 335 19.514 129.347 19.183 1.00 57.47 C
ATOM 22 N3 A B 335 20.023 128.456 20.023 1.00 58.04 N
ATOM 23 C4 A B 335 21.009 129.003 20.757 1.00 58.58 C
ATOM 24 P C B 336 25.586 124.704 20.516 1.00 58.87 P
ATOM 25 OP1 C B 336 26.105 123.330 20.305 1.00 59.70 O
ATOM 26 OP2 C B 336 26.527 125.784 20.894 1.00 61.83 O
ATOM 27 O5' C B 336 24.830 125.160 19.190 1.00 60.61 O
TER

Atoms:
OP1: (19.012,123.096,23.987)
OP2: (16.652,123.944,23.427)
C3': (18.453,127.435,26.343)
C1': (18.376,128.935,24.540)
C5': (19.641,125.760,24.760)
O4': (19.521,128.137,24.337)
C8: (17.134,128.602,22.331)
O2': (16.524,128.919,26.101)
C6: (17.427,131.666,20.629)
C5: (17.392,130.509,21.432)
C4: (18.024,130.577,22.658)
P: (18.125,124.102,23.342)
C4': (19.609,127.138,25.391)
C2': (17.444,128.095,25.413)
C2: (18.628,132.671,22.329)
N1: (18.064,132.752,21.121)
N3: (18.669,131.641,23.173)
N6: (16.872,131.742,19.416)
N7: (16.829,129.256,21.240)
N9: (17.859,129.340,23.234)
O5': (18.487,125.556,23.903)
O3': (18.848,128.446,27.281)
OP1: (27.261,126.964,24.763)
OP2: (26.753,129.304,23.846)
C3': (23.725,125.871,21.952)
C1': (21.656,126.996,22.160)
C5': (24.402,126.326,24.388)
O4': (22.231,126.876,23.450)
C8: (22.634,129.354,22.182)
O2': (21.651,124.798,21.229)
C6: (20.837,131.155,19.751)
C5: (21.464,130.308,20.688)
C4: (21.009,129.003,20.757)
P: (26.331,128.112,24.627)
C4': (23.320,125.912,23.416)
C2': (22.381,126.005,21.247)
C2: (19.514,129.347,19.183)
N1: (19.847,130.631,19.002)
N3: (20.023,128.456,20.023)
N6: (21.162,132.434,19.564)
N7: (22.490,130.517,21.598)
N9: (21.770,128.391,21.726)
O5': (24.971,127.584,23.989)
O3': (24.419,124.668,21.622)
Image (generated by PyMOL):
PyMOL image
show in jmol