Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A139:A430
Extra
PDB:
ATOM 1 O3' G A 138 61.846 132.848 37.765 1.00 51.74 O
ATOM 2 P A A 139 61.958 132.685 39.359 1.00 53.86 P
ATOM 3 OP1 A A 139 61.274 133.888 39.918 1.00 52.01 O
ATOM 4 OP2 A A 139 63.366 132.393 39.747 1.00 51.84 O
ATOM 5 O5' A A 139 61.068 131.390 39.642 1.00 55.35 O
ATOM 6 C5' A A 139 60.125 131.338 40.748 1.00 55.77 C
ATOM 7 C4' A A 139 59.174 130.170 40.572 1.00 55.62 C
ATOM 8 O4' A A 139 58.303 130.413 39.444 1.00 55.32 O
ATOM 9 C3' A A 139 59.859 128.852 40.267 1.00 55.45 C
ATOM 10 O3' A A 139 60.265 128.241 41.481 1.00 53.29 O
ATOM 11 C2' A A 139 58.823 128.089 39.438 1.00 55.31 C
ATOM 12 O2' A A 139 57.796 127.435 40.153 1.00 57.30 O
ATOM 13 C1' A A 139 58.173 129.233 38.671 1.00 55.18 C
ATOM 14 N9 A A 139 58.752 129.487 37.355 1.00 54.01 N
ATOM 15 C8 A A 139 59.650 130.461 36.984 1.00 53.22 C
ATOM 16 N7 A A 139 59.926 130.458 35.706 1.00 52.80 N
ATOM 17 C5 A A 139 59.179 129.400 35.207 1.00 51.32 C
ATOM 18 C6 A A 139 59.027 128.879 33.922 1.00 50.72 C
ATOM 19 N6 A A 139 59.666 129.347 32.848 1.00 50.18 N
ATOM 20 N1 A A 139 58.188 127.837 33.767 1.00 50.42 N
ATOM 21 C2 A A 139 57.562 127.350 34.838 1.00 50.46 C
ATOM 22 N3 A A 139 57.629 127.745 36.095 1.00 51.32 N
ATOM 23 C4 A A 139 58.462 128.790 36.213 1.00 52.02 C
ATOM 24 P A A 140 61.820 127.987 41.755 1.00 51.62 P
ATOM 25 OP1 A A 140 61.972 128.071 43.226 1.00 53.69 O
ATOM 26 OP2 A A 140 62.621 128.884 40.880 1.00 50.97 O
ATOM 27 O5' A A 140 62.040 126.474 41.300 1.00 50.52 O
TER
ATOM 1 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 2 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 3 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 4 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 5 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
ATOM 6 C5' A B 430 54.939 131.200 38.245 1.00 51.96 C
ATOM 7 C4' A B 430 55.586 131.917 37.097 1.00 52.09 C
ATOM 8 O4' A B 430 56.326 130.972 36.289 1.00 51.31 O
ATOM 9 C3' A B 430 54.596 132.537 36.133 1.00 52.87 C
ATOM 10 O3' A B 430 54.146 133.791 36.624 1.00 55.37 O
ATOM 11 C2' A B 430 55.421 132.636 34.860 1.00 53.27 C
ATOM 12 O2' A B 430 56.316 133.727 34.890 1.00 52.84 O
ATOM 13 C1' A B 430 56.227 131.334 34.922 1.00 53.31 C
ATOM 14 N9 A B 430 55.601 130.226 34.197 1.00 54.77 N
ATOM 15 C8 A B 430 55.115 129.055 34.718 1.00 55.24 C
ATOM 16 N7 A B 430 54.587 128.256 33.826 1.00 54.77 N
ATOM 17 C5 A B 430 54.732 128.948 32.636 1.00 55.86 C
ATOM 18 C6 A B 430 54.348 128.655 31.327 1.00 57.03 C
ATOM 19 N6 A B 430 53.693 127.548 30.981 1.00 58.59 N
ATOM 20 N1 A B 430 54.650 129.555 30.367 1.00 57.18 N
ATOM 21 C2 A B 430 55.279 130.678 30.718 1.00 56.32 C
ATOM 22 N3 A B 430 55.673 131.076 31.917 1.00 56.23 N
ATOM 23 C4 A B 430 55.367 130.155 32.845 1.00 55.50 C
ATOM 24 P C B 431 52.578 134.127 36.633 1.00 56.92 P
ATOM 25 OP1 C B 431 52.451 135.531 37.098 1.00 57.36 O
ATOM 26 OP2 C B 431 51.811 133.055 37.328 1.00 58.71 O
ATOM 27 O5' C B 431 52.209 134.105 35.089 1.00 58.19 O
TER
ATOM 2 P A A 139 61.958 132.685 39.359 1.00 53.86 P
ATOM 3 OP1 A A 139 61.274 133.888 39.918 1.00 52.01 O
ATOM 4 OP2 A A 139 63.366 132.393 39.747 1.00 51.84 O
ATOM 5 O5' A A 139 61.068 131.390 39.642 1.00 55.35 O
ATOM 6 C5' A A 139 60.125 131.338 40.748 1.00 55.77 C
ATOM 7 C4' A A 139 59.174 130.170 40.572 1.00 55.62 C
ATOM 8 O4' A A 139 58.303 130.413 39.444 1.00 55.32 O
ATOM 9 C3' A A 139 59.859 128.852 40.267 1.00 55.45 C
ATOM 10 O3' A A 139 60.265 128.241 41.481 1.00 53.29 O
ATOM 11 C2' A A 139 58.823 128.089 39.438 1.00 55.31 C
ATOM 12 O2' A A 139 57.796 127.435 40.153 1.00 57.30 O
ATOM 13 C1' A A 139 58.173 129.233 38.671 1.00 55.18 C
ATOM 14 N9 A A 139 58.752 129.487 37.355 1.00 54.01 N
ATOM 15 C8 A A 139 59.650 130.461 36.984 1.00 53.22 C
ATOM 16 N7 A A 139 59.926 130.458 35.706 1.00 52.80 N
ATOM 17 C5 A A 139 59.179 129.400 35.207 1.00 51.32 C
ATOM 18 C6 A A 139 59.027 128.879 33.922 1.00 50.72 C
ATOM 19 N6 A A 139 59.666 129.347 32.848 1.00 50.18 N
ATOM 20 N1 A A 139 58.188 127.837 33.767 1.00 50.42 N
ATOM 21 C2 A A 139 57.562 127.350 34.838 1.00 50.46 C
ATOM 22 N3 A A 139 57.629 127.745 36.095 1.00 51.32 N
ATOM 23 C4 A A 139 58.462 128.790 36.213 1.00 52.02 C
ATOM 24 P A A 140 61.820 127.987 41.755 1.00 51.62 P
ATOM 25 OP1 A A 140 61.972 128.071 43.226 1.00 53.69 O
ATOM 26 OP2 A A 140 62.621 128.884 40.880 1.00 50.97 O
ATOM 27 O5' A A 140 62.040 126.474 41.300 1.00 50.52 O
TER
ATOM 1 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 2 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 3 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 4 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 5 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
ATOM 6 C5' A B 430 54.939 131.200 38.245 1.00 51.96 C
ATOM 7 C4' A B 430 55.586 131.917 37.097 1.00 52.09 C
ATOM 8 O4' A B 430 56.326 130.972 36.289 1.00 51.31 O
ATOM 9 C3' A B 430 54.596 132.537 36.133 1.00 52.87 C
ATOM 10 O3' A B 430 54.146 133.791 36.624 1.00 55.37 O
ATOM 11 C2' A B 430 55.421 132.636 34.860 1.00 53.27 C
ATOM 12 O2' A B 430 56.316 133.727 34.890 1.00 52.84 O
ATOM 13 C1' A B 430 56.227 131.334 34.922 1.00 53.31 C
ATOM 14 N9 A B 430 55.601 130.226 34.197 1.00 54.77 N
ATOM 15 C8 A B 430 55.115 129.055 34.718 1.00 55.24 C
ATOM 16 N7 A B 430 54.587 128.256 33.826 1.00 54.77 N
ATOM 17 C5 A B 430 54.732 128.948 32.636 1.00 55.86 C
ATOM 18 C6 A B 430 54.348 128.655 31.327 1.00 57.03 C
ATOM 19 N6 A B 430 53.693 127.548 30.981 1.00 58.59 N
ATOM 20 N1 A B 430 54.650 129.555 30.367 1.00 57.18 N
ATOM 21 C2 A B 430 55.279 130.678 30.718 1.00 56.32 C
ATOM 22 N3 A B 430 55.673 131.076 31.917 1.00 56.23 N
ATOM 23 C4 A B 430 55.367 130.155 32.845 1.00 55.50 C
ATOM 24 P C B 431 52.578 134.127 36.633 1.00 56.92 P
ATOM 25 OP1 C B 431 52.451 135.531 37.098 1.00 57.36 O
ATOM 26 OP2 C B 431 51.811 133.055 37.328 1.00 58.71 O
ATOM 27 O5' C B 431 52.209 134.105 35.089 1.00 58.19 O
TER
Atoms:
OP1: (61.274,133.888,39.918)
OP2: (63.366,132.393,39.747)
C3': (59.859,128.852,40.267)
C1': (58.173,129.233,38.671)
C5': (60.125,131.338,40.748)
O4': (58.303,130.413,39.444)
C8: (59.650,130.461,36.984)
O2': (57.796,127.435,40.153)
C6: (59.027,128.879,33.922)
C5: (59.179,129.400,35.207)
C4: (58.462,128.790,36.213)
P: (61.958,132.685,39.359)
C4': (59.174,130.170,40.572)
C2': (58.823,128.089,39.438)
C2: (57.562,127.350,34.838)
N1: (58.188,127.837,33.767)
N3: (57.629,127.745,36.095)
N6: (59.666,129.347,32.848)
N7: (59.926,130.458,35.706)
N9: (58.752,129.487,37.355)
O5': (61.068,131.390,39.642)
O3': (60.265,128.241,41.481)
OP2: (63.366,132.393,39.747)
C3': (59.859,128.852,40.267)
C1': (58.173,129.233,38.671)
C5': (60.125,131.338,40.748)
O4': (58.303,130.413,39.444)
C8: (59.650,130.461,36.984)
O2': (57.796,127.435,40.153)
C6: (59.027,128.879,33.922)
C5: (59.179,129.400,35.207)
C4: (58.462,128.790,36.213)
P: (61.958,132.685,39.359)
C4': (59.174,130.170,40.572)
C2': (58.823,128.089,39.438)
C2: (57.562,127.350,34.838)
N1: (58.188,127.837,33.767)
N3: (57.629,127.745,36.095)
N6: (59.666,129.347,32.848)
N7: (59.926,130.458,35.706)
N9: (58.752,129.487,37.355)
O5': (61.068,131.390,39.642)
O3': (60.265,128.241,41.481)
OP1: (54.031,128.945,39.783)
OP2: (51.931,128.983,38.324)
C3': (54.596,132.537,36.133)
C1': (56.227,131.334,34.922)
C5': (54.939,131.200,38.245)
O4': (56.326,130.972,36.289)
C8: (55.115,129.055,34.718)
O2': (56.316,133.727,34.890)
C6: (54.348,128.655,31.327)
C5: (54.732,128.948,32.636)
C4: (55.367,130.155,32.845)
P: (53.398,129.063,38.441)
C4': (55.586,131.917,37.097)
C2': (55.421,132.636,34.860)
C2: (55.279,130.678,30.718)
N1: (54.650,129.555,30.367)
N3: (55.673,131.076,31.917)
N6: (53.693,127.548,30.981)
N7: (54.587,128.256,33.826)
N9: (55.601,130.226,34.197)
O5': (53.815,130.442,37.769)
O3': (54.146,133.791,36.624)
OP2: (51.931,128.983,38.324)
C3': (54.596,132.537,36.133)
C1': (56.227,131.334,34.922)
C5': (54.939,131.200,38.245)
O4': (56.326,130.972,36.289)
C8: (55.115,129.055,34.718)
O2': (56.316,133.727,34.890)
C6: (54.348,128.655,31.327)
C5: (54.732,128.948,32.636)
C4: (55.367,130.155,32.845)
P: (53.398,129.063,38.441)
C4': (55.586,131.917,37.097)
C2': (55.421,132.636,34.860)
C2: (55.279,130.678,30.718)
N1: (54.650,129.555,30.367)
N3: (55.673,131.076,31.917)
N6: (53.693,127.548,30.981)
N7: (54.587,128.256,33.826)
N9: (55.601,130.226,34.197)
O5': (53.815,130.442,37.769)
O3': (54.146,133.791,36.624)
Image (generated by PyMOL):