ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0317:0335

Extra

PDB:
ATOM 1 O3' U A 316 19.147 124.933 21.744 1.00 66.55 O
ATOM 2 P A A 317 18.712 124.785 23.286 1.00 65.48 P
ATOM 3 OP1 A A 317 19.586 123.733 23.871 1.00 62.93 O
ATOM 4 OP2 A A 317 17.232 124.625 23.335 1.00 64.88 O
ATOM 5 O5' A A 317 19.041 126.201 23.943 1.00 62.82 O
ATOM 6 C5' A A 317 20.248 126.412 24.693 1.00 61.27 C
ATOM 7 C4' A A 317 20.261 127.798 25.292 1.00 59.80 C
ATOM 8 O4' A A 317 20.189 128.773 24.218 1.00 60.44 O
ATOM 9 C3' A A 317 19.110 128.131 26.238 1.00 59.67 C
ATOM 10 O3' A A 317 19.537 129.127 27.188 1.00 61.37 O
ATOM 11 C2' A A 317 18.122 128.794 25.283 1.00 59.48 C
ATOM 12 O2' A A 317 17.177 129.634 25.914 1.00 60.15 O
ATOM 13 C1' A A 317 19.081 129.615 24.428 1.00 60.70 C
ATOM 14 N9 A A 317 18.591 130.091 23.134 1.00 62.72 N
ATOM 15 C8 A A 317 17.889 129.414 22.166 1.00 63.55 C
ATOM 16 N7 A A 317 17.585 130.147 21.124 1.00 64.67 N
ATOM 17 C5 A A 317 18.125 131.392 21.423 1.00 65.69 C
ATOM 18 C6 A A 317 18.138 132.615 20.724 1.00 65.79 C
ATOM 19 N6 A A 317 17.560 132.795 19.534 1.00 65.43 N
ATOM 20 N1 A A 317 18.771 133.662 21.300 1.00 65.68 N
ATOM 21 C2 A A 317 19.342 133.484 22.497 1.00 65.39 C
ATOM 22 N3 A A 317 19.390 132.390 23.254 1.00 64.63 N
ATOM 23 C4 A A 317 18.756 131.367 22.654 1.00 64.47 C
ATOM 24 P C A 318 20.344 128.715 28.530 1.00 60.21 P
ATOM 25 OP1 C A 318 20.364 129.949 29.355 1.00 59.21 O
ATOM 26 OP2 C A 318 21.629 128.048 28.160 1.00 56.64 O
ATOM 27 O5' C A 318 19.417 127.664 29.289 1.00 58.83 O
TER

ATOM 1 O3' U B 334 26.452 129.361 26.134 1.00 58.31 O
ATOM 2 P A B 335 27.011 128.999 24.679 1.00 57.80 P
ATOM 3 OP1 A B 335 28.051 127.944 24.803 1.00 56.77 O
ATOM 4 OP2 A B 335 27.344 130.276 24.012 1.00 59.18 O
ATOM 5 O5' A B 335 25.746 128.369 23.947 1.00 61.15 O
ATOM 6 C5' A B 335 25.179 127.116 24.395 1.00 62.69 C
ATOM 7 C4' A B 335 24.023 126.706 23.508 1.00 61.85 C
ATOM 8 O4' A B 335 22.950 127.679 23.618 1.00 62.64 O
ATOM 9 C3' A B 335 24.316 126.647 22.021 1.00 61.60 C
ATOM 10 O3' A B 335 24.984 125.440 21.656 1.00 60.59 O
ATOM 11 C2' A B 335 22.923 126.787 21.413 1.00 62.25 C
ATOM 12 O2' A B 335 22.177 125.583 21.443 1.00 62.88 O
ATOM 13 C1' A B 335 22.276 127.789 22.373 1.00 63.44 C
ATOM 14 N9 A B 335 22.325 129.191 21.938 1.00 66.22 N
ATOM 15 C8 A B 335 23.109 130.198 22.448 1.00 67.32 C
ATOM 16 N7 A B 335 22.932 131.358 21.861 1.00 68.03 N
ATOM 17 C5 A B 335 21.967 131.102 20.897 1.00 68.18 C
ATOM 18 C6 A B 335 21.346 131.925 19.933 1.00 67.96 C
ATOM 19 N6 A B 335 21.613 133.225 19.779 1.00 67.43 N
ATOM 20 N1 A B 335 20.429 131.358 19.123 1.00 67.83 N
ATOM 21 C2 A B 335 20.157 130.056 19.275 1.00 68.41 C
ATOM 22 N3 A B 335 20.669 129.181 20.139 1.00 68.72 N
ATOM 23 C4 A B 335 21.581 129.772 20.932 1.00 68.16 C
ATOM 24 P C B 336 26.092 125.470 20.491 1.00 61.46 P
ATOM 25 OP1 C B 336 26.502 124.080 20.165 1.00 59.60 O
ATOM 26 OP2 C B 336 27.122 126.463 20.873 1.00 61.05 O
ATOM 27 O5' C B 336 25.297 126.050 19.238 1.00 65.45 O
TER

Atoms:
OP1: (19.586,123.733,23.871)
OP2: (17.232,124.625,23.335)
C3': (19.110,128.131,26.238)
C1': (19.081,129.615,24.428)
C5': (20.248,126.412,24.693)
O4': (20.189,128.773,24.218)
C8: (17.889,129.414,22.166)
O2': (17.177,129.634,25.914)
C6: (18.138,132.615,20.724)
C5: (18.125,131.392,21.423)
C4: (18.756,131.367,22.654)
P: (18.712,124.785,23.286)
C4': (20.261,127.798,25.292)
C2': (18.122,128.794,25.283)
C2: (19.342,133.484,22.497)
N1: (18.771,133.662,21.300)
N3: (19.390,132.390,23.254)
N6: (17.560,132.795,19.534)
N7: (17.585,130.147,21.124)
N9: (18.591,130.091,23.134)
O5': (19.041,126.201,23.943)
O3': (19.537,129.127,27.188)
OP1: (28.051,127.944,24.803)
OP2: (27.344,130.276,24.012)
C3': (24.316,126.647,22.021)
C1': (22.276,127.789,22.373)
C5': (25.179,127.116,24.395)
O4': (22.950,127.679,23.618)
C8: (23.109,130.198,22.448)
O2': (22.177,125.583,21.443)
C6: (21.346,131.925,19.933)
C5: (21.967,131.102,20.897)
C4: (21.581,129.772,20.932)
P: (27.011,128.999,24.679)
C4': (24.023,126.706,23.508)
C2': (22.923,126.787,21.413)
C2: (20.157,130.056,19.275)
N1: (20.429,131.358,19.123)
N3: (20.669,129.181,20.139)
N6: (21.613,133.225,19.779)
N7: (22.932,131.358,21.861)
N9: (22.325,129.191,21.938)
O5': (25.746,128.369,23.947)
O3': (24.984,125.440,21.656)
Image (generated by PyMOL):
PyMOL image
show in jmol