ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02090:02104

Extra

PDB:
ATOM 1 O3' C A2089 118.800 116.624 29.749 1.00 59.31 O
ATOM 2 P A A2090 118.234 118.046 30.202 1.00 58.41 P
ATOM 3 OP1 A A2090 118.342 118.962 29.036 1.00 58.16 O
ATOM 4 OP2 A A2090 118.907 118.388 31.476 1.00 58.08 O
ATOM 5 O5' A A2090 116.687 117.774 30.472 1.00 58.54 O
ATOM 6 C5' A A2090 115.798 117.395 29.400 1.00 56.00 C
ATOM 7 C4' A A2090 114.839 116.330 29.873 1.00 55.47 C
ATOM 8 O4' A A2090 115.589 115.146 30.252 1.00 56.46 O
ATOM 9 C3' A A2090 114.053 116.682 31.122 1.00 54.37 C
ATOM 10 O3' A A2090 112.900 117.440 30.809 1.00 53.52 O
ATOM 11 C2' A A2090 113.704 115.312 31.678 1.00 55.03 C
ATOM 12 O2' A A2090 112.646 114.698 30.973 1.00 53.46 O
ATOM 13 C1' A A2090 114.993 114.544 31.389 1.00 56.00 C
ATOM 14 N9 A A2090 115.967 114.571 32.483 1.00 56.96 N
ATOM 15 C8 A A2090 117.252 115.043 32.434 1.00 57.32 C
ATOM 16 N7 A A2090 117.912 114.900 33.557 1.00 59.34 N
ATOM 17 C5 A A2090 116.997 114.300 34.410 1.00 58.41 C
ATOM 18 C6 A A2090 117.087 113.877 35.751 1.00 57.71 C
ATOM 19 N6 A A2090 118.189 113.986 36.494 1.00 58.28 N
ATOM 20 N1 A A2090 115.991 113.326 36.308 1.00 57.15 N
ATOM 21 C2 A A2090 114.888 113.209 35.566 1.00 57.21 C
ATOM 22 N3 A A2090 114.681 113.561 34.300 1.00 58.91 N
ATOM 23 C4 A A2090 115.790 114.106 33.769 1.00 58.34 C
ATOM 24 P C A2091 112.670 118.856 31.523 1.00 53.20 P
ATOM 25 OP1 C A2091 111.340 119.356 31.093 1.00 53.00 O
ATOM 26 OP2 C A2091 113.875 119.680 31.276 1.00 55.65 O
ATOM 27 O5' C A2091 112.638 118.519 33.080 1.00 52.10 O
TER

ATOM 1 O3' G B2103 120.826 111.307 40.893 1.00 68.32 O
ATOM 2 P A B2104 121.639 109.938 40.763 1.00 68.36 P
ATOM 3 OP1 A B2104 121.097 109.024 41.808 1.00 69.68 O
ATOM 4 OP2 A B2104 123.088 110.261 40.746 1.00 69.12 O
ATOM 5 O5' A B2104 121.227 109.399 39.320 1.00 67.10 O
ATOM 6 C5' A B2104 120.297 108.307 39.163 1.00 63.55 C
ATOM 7 C4' A B2104 118.877 108.828 39.100 1.00 60.55 C
ATOM 8 O4' A B2104 118.822 109.996 38.236 1.00 58.98 O
ATOM 9 C3' A B2104 117.860 107.842 38.539 1.00 59.15 C
ATOM 10 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 11 C2' A B2104 117.834 108.233 37.071 1.00 58.40 C
ATOM 12 O2' A B2104 116.659 107.825 36.412 1.00 60.18 O
ATOM 13 C1' A B2104 117.924 109.754 37.176 1.00 58.22 C
ATOM 14 N9 A B2104 118.438 110.402 35.972 1.00 57.90 N
ATOM 15 C8 A B2104 119.717 110.826 35.717 1.00 58.31 C
ATOM 16 N7 A B2104 119.877 111.325 34.518 1.00 58.40 N
ATOM 17 C5 A B2104 118.618 111.234 33.949 1.00 58.12 C
ATOM 18 C6 A B2104 118.132 111.576 32.682 1.00 58.60 C
ATOM 19 N6 A B2104 118.894 112.077 31.711 1.00 60.23 N
ATOM 20 N1 A B2104 116.821 111.371 32.436 1.00 59.09 N
ATOM 21 C2 A B2104 116.065 110.843 33.402 1.00 57.85 C
ATOM 22 N3 A B2104 116.410 110.465 34.627 1.00 57.59 N
ATOM 23 C4 A B2104 117.717 110.688 34.839 1.00 57.99 C
ATOM 24 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 25 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 26 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 27 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
TER

Atoms:
OP1: (118.342,118.962,29.036)
OP2: (118.907,118.388,31.476)
C3': (114.053,116.682,31.122)
C1': (114.993,114.544,31.389)
C5': (115.798,117.395,29.400)
O4': (115.589,115.146,30.252)
C8: (117.252,115.043,32.434)
O2': (112.646,114.698,30.973)
C6: (117.087,113.877,35.751)
C5: (116.997,114.300,34.410)
C4: (115.790,114.106,33.769)
P: (118.234,118.046,30.202)
C4': (114.839,116.330,29.873)
C2': (113.704,115.312,31.678)
C2: (114.888,113.209,35.566)
N1: (115.991,113.326,36.308)
N3: (114.681,113.561,34.300)
N6: (118.189,113.986,36.494)
N7: (117.912,114.900,33.557)
N9: (115.967,114.571,32.483)
O5': (116.687,117.774,30.472)
O3': (112.900,117.440,30.809)
OP1: (121.097,109.024,41.808)
OP2: (123.088,110.261,40.746)
C3': (117.860,107.842,38.539)
C1': (117.924,109.754,37.176)
C5': (120.297,108.307,39.163)
O4': (118.822,109.996,38.236)
C8: (119.717,110.826,35.717)
O2': (116.659,107.825,36.412)
C6: (118.132,111.576,32.682)
C5: (118.618,111.234,33.949)
C4: (117.717,110.688,34.839)
P: (121.639,109.938,40.763)
C4': (118.877,108.828,39.100)
C2': (117.834,108.233,37.071)
C2: (116.065,110.843,33.402)
N1: (116.821,111.371,32.436)
N3: (116.410,110.465,34.627)
N6: (118.894,112.077,31.711)
N7: (119.877,111.325,34.518)
N9: (118.438,110.402,35.972)
O5': (121.227,109.399,39.320)
O3': (116.575,108.091,39.105)
Image (generated by PyMOL):
PyMOL image
show in jmol