Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1859:A1869
Extra
PDB:
ATOM 1 O3' U A1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 2 P A A1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 3 OP1 A A1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 4 OP2 A A1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 5 O5' A A1859 -102.914 -35.210 91.669 1.00 39.63 O
ATOM 6 C5' A A1859 -104.077 -34.430 91.914 1.00 39.63 C
ATOM 7 C4' A A1859 -103.733 -33.106 92.555 1.00 39.63 C
ATOM 8 O4' A A1859 -103.473 -32.115 91.522 1.00 39.63 O
ATOM 9 C3' A A1859 -104.830 -32.483 93.405 1.00 39.63 C
ATOM 10 O3' A A1859 -104.863 -32.991 94.733 1.00 39.63 O
ATOM 11 C2' A A1859 -104.514 -30.999 93.314 1.00 39.63 C
ATOM 12 O2' A A1859 -103.407 -30.666 94.136 1.00 39.63 O
ATOM 13 C1' A A1859 -104.074 -30.891 91.866 1.00 39.63 C
ATOM 14 N9 A A1859 -105.204 -30.673 90.955 1.00 39.61 N
ATOM 15 C8 A A1859 -105.906 -31.616 90.259 1.00 39.61 C
ATOM 16 N7 A A1859 -106.833 -31.105 89.494 1.00 39.61 N
ATOM 17 C5 A A1859 -106.728 -29.735 89.695 1.00 39.61 C
ATOM 18 C6 A A1859 -107.421 -28.618 89.177 1.00 39.61 C
ATOM 19 N6 A A1859 -108.428 -28.680 88.309 1.00 39.61 N
ATOM 20 N1 A A1859 -107.050 -27.393 89.585 1.00 39.61 N
ATOM 21 C2 A A1859 -106.051 -27.302 90.461 1.00 39.61 C
ATOM 22 N3 A A1859 -105.327 -28.269 91.018 1.00 39.61 N
ATOM 23 C4 A A1859 -105.721 -29.470 90.590 1.00 39.61 C
ATOM 24 P G A1860 -106.174 -33.764 95.271 1.00 60.82 P
ATOM 25 OP1 G A1860 -105.961 -34.018 96.718 1.00 60.82 O
ATOM 26 OP2 G A1860 -106.406 -34.923 94.376 1.00 60.82 O
ATOM 27 O5' G A1860 -107.330 -32.687 95.068 1.00 60.82 O
TER
ATOM 1 O3' G B1868 -108.998 -25.659 82.760 1.00 45.64 O
ATOM 2 P A B1869 -107.529 -25.277 83.326 1.00 31.87 P
ATOM 3 OP1 A B1869 -106.899 -24.370 82.328 1.00 31.87 O
ATOM 4 OP2 A B1869 -106.846 -26.559 83.659 1.00 31.87 O
ATOM 5 O5' A B1869 -107.846 -24.452 84.662 1.00 31.87 O
ATOM 6 C5' A B1869 -107.352 -23.133 84.832 1.00 31.87 C
ATOM 7 C4' A B1869 -106.532 -23.010 86.087 1.00 31.87 C
ATOM 8 O4' A B1869 -106.879 -24.081 86.998 1.00 31.87 O
ATOM 9 C3' A B1869 -105.033 -23.172 85.925 1.00 31.87 C
ATOM 10 O3' A B1869 -104.390 -22.032 85.402 1.00 31.87 O
ATOM 11 C2' A B1869 -104.588 -23.540 87.331 1.00 31.87 C
ATOM 12 O2' A B1869 -104.549 -22.400 88.166 1.00 31.87 O
ATOM 13 C1' A B1869 -105.744 -24.425 87.784 1.00 31.87 C
ATOM 14 N9 A B1869 -105.436 -25.877 87.631 1.00 31.56 N
ATOM 15 C8 A B1869 -106.004 -26.878 86.876 1.00 31.56 C
ATOM 16 N7 A B1869 -105.419 -28.040 87.045 1.00 31.56 N
ATOM 17 C5 A B1869 -104.398 -27.821 87.973 1.00 31.56 C
ATOM 18 C6 A B1869 -103.396 -28.634 88.599 1.00 31.56 C
ATOM 19 N6 A B1869 -103.189 -29.937 88.420 1.00 31.56 N
ATOM 20 N1 A B1869 -102.558 -28.061 89.480 1.00 31.56 N
ATOM 21 C2 A B1869 -102.717 -26.755 89.716 1.00 31.56 C
ATOM 22 N3 A B1869 -103.592 -25.893 89.203 1.00 31.56 N
ATOM 23 C4 A B1869 -104.415 -26.488 88.330 1.00 31.56 C
ATOM 24 P A B1870 -103.350 -22.214 84.198 1.00 31.17 P
ATOM 25 OP1 A B1870 -103.282 -20.929 83.457 1.00 31.17 O
ATOM 26 OP2 A B1870 -103.767 -23.435 83.462 1.00 31.17 O
ATOM 27 O5' A B1870 -101.973 -22.474 84.953 1.00 31.17 O
TER
ATOM 2 P A A1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 3 OP1 A A1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 4 OP2 A A1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 5 O5' A A1859 -102.914 -35.210 91.669 1.00 39.63 O
ATOM 6 C5' A A1859 -104.077 -34.430 91.914 1.00 39.63 C
ATOM 7 C4' A A1859 -103.733 -33.106 92.555 1.00 39.63 C
ATOM 8 O4' A A1859 -103.473 -32.115 91.522 1.00 39.63 O
ATOM 9 C3' A A1859 -104.830 -32.483 93.405 1.00 39.63 C
ATOM 10 O3' A A1859 -104.863 -32.991 94.733 1.00 39.63 O
ATOM 11 C2' A A1859 -104.514 -30.999 93.314 1.00 39.63 C
ATOM 12 O2' A A1859 -103.407 -30.666 94.136 1.00 39.63 O
ATOM 13 C1' A A1859 -104.074 -30.891 91.866 1.00 39.63 C
ATOM 14 N9 A A1859 -105.204 -30.673 90.955 1.00 39.61 N
ATOM 15 C8 A A1859 -105.906 -31.616 90.259 1.00 39.61 C
ATOM 16 N7 A A1859 -106.833 -31.105 89.494 1.00 39.61 N
ATOM 17 C5 A A1859 -106.728 -29.735 89.695 1.00 39.61 C
ATOM 18 C6 A A1859 -107.421 -28.618 89.177 1.00 39.61 C
ATOM 19 N6 A A1859 -108.428 -28.680 88.309 1.00 39.61 N
ATOM 20 N1 A A1859 -107.050 -27.393 89.585 1.00 39.61 N
ATOM 21 C2 A A1859 -106.051 -27.302 90.461 1.00 39.61 C
ATOM 22 N3 A A1859 -105.327 -28.269 91.018 1.00 39.61 N
ATOM 23 C4 A A1859 -105.721 -29.470 90.590 1.00 39.61 C
ATOM 24 P G A1860 -106.174 -33.764 95.271 1.00 60.82 P
ATOM 25 OP1 G A1860 -105.961 -34.018 96.718 1.00 60.82 O
ATOM 26 OP2 G A1860 -106.406 -34.923 94.376 1.00 60.82 O
ATOM 27 O5' G A1860 -107.330 -32.687 95.068 1.00 60.82 O
TER
ATOM 1 O3' G B1868 -108.998 -25.659 82.760 1.00 45.64 O
ATOM 2 P A B1869 -107.529 -25.277 83.326 1.00 31.87 P
ATOM 3 OP1 A B1869 -106.899 -24.370 82.328 1.00 31.87 O
ATOM 4 OP2 A B1869 -106.846 -26.559 83.659 1.00 31.87 O
ATOM 5 O5' A B1869 -107.846 -24.452 84.662 1.00 31.87 O
ATOM 6 C5' A B1869 -107.352 -23.133 84.832 1.00 31.87 C
ATOM 7 C4' A B1869 -106.532 -23.010 86.087 1.00 31.87 C
ATOM 8 O4' A B1869 -106.879 -24.081 86.998 1.00 31.87 O
ATOM 9 C3' A B1869 -105.033 -23.172 85.925 1.00 31.87 C
ATOM 10 O3' A B1869 -104.390 -22.032 85.402 1.00 31.87 O
ATOM 11 C2' A B1869 -104.588 -23.540 87.331 1.00 31.87 C
ATOM 12 O2' A B1869 -104.549 -22.400 88.166 1.00 31.87 O
ATOM 13 C1' A B1869 -105.744 -24.425 87.784 1.00 31.87 C
ATOM 14 N9 A B1869 -105.436 -25.877 87.631 1.00 31.56 N
ATOM 15 C8 A B1869 -106.004 -26.878 86.876 1.00 31.56 C
ATOM 16 N7 A B1869 -105.419 -28.040 87.045 1.00 31.56 N
ATOM 17 C5 A B1869 -104.398 -27.821 87.973 1.00 31.56 C
ATOM 18 C6 A B1869 -103.396 -28.634 88.599 1.00 31.56 C
ATOM 19 N6 A B1869 -103.189 -29.937 88.420 1.00 31.56 N
ATOM 20 N1 A B1869 -102.558 -28.061 89.480 1.00 31.56 N
ATOM 21 C2 A B1869 -102.717 -26.755 89.716 1.00 31.56 C
ATOM 22 N3 A B1869 -103.592 -25.893 89.203 1.00 31.56 N
ATOM 23 C4 A B1869 -104.415 -26.488 88.330 1.00 31.56 C
ATOM 24 P A B1870 -103.350 -22.214 84.198 1.00 31.17 P
ATOM 25 OP1 A B1870 -103.282 -20.929 83.457 1.00 31.17 O
ATOM 26 OP2 A B1870 -103.767 -23.435 83.462 1.00 31.17 O
ATOM 27 O5' A B1870 -101.973 -22.474 84.953 1.00 31.17 O
TER
Atoms:
OP1: (-101.400,-35.832,89.764)
OP2: (-103.255,-37.419,90.528)
C3': (-104.830,-32.483,93.405)
C1': (-104.074,-30.891,91.866)
C5': (-104.077,-34.430,91.914)
O4': (-103.473,-32.115,91.522)
C8: (-105.906,-31.616,90.259)
O2': (-103.407,-30.666,94.136)
C6: (-107.421,-28.618,89.177)
C5: (-106.728,-29.735,89.695)
C4: (-105.721,-29.470,90.590)
P: (-102.762,-36.036,90.329)
C4': (-103.733,-33.106,92.555)
C2': (-104.514,-30.999,93.314)
C2: (-106.051,-27.302,90.461)
N1: (-107.050,-27.393,89.585)
N3: (-105.327,-28.269,91.018)
N6: (-108.428,-28.680,88.309)
N7: (-106.833,-31.105,89.494)
N9: (-105.204,-30.673,90.955)
O5': (-102.914,-35.210,91.669)
O3': (-104.863,-32.991,94.733)
OP2: (-103.255,-37.419,90.528)
C3': (-104.830,-32.483,93.405)
C1': (-104.074,-30.891,91.866)
C5': (-104.077,-34.430,91.914)
O4': (-103.473,-32.115,91.522)
C8: (-105.906,-31.616,90.259)
O2': (-103.407,-30.666,94.136)
C6: (-107.421,-28.618,89.177)
C5: (-106.728,-29.735,89.695)
C4: (-105.721,-29.470,90.590)
P: (-102.762,-36.036,90.329)
C4': (-103.733,-33.106,92.555)
C2': (-104.514,-30.999,93.314)
C2: (-106.051,-27.302,90.461)
N1: (-107.050,-27.393,89.585)
N3: (-105.327,-28.269,91.018)
N6: (-108.428,-28.680,88.309)
N7: (-106.833,-31.105,89.494)
N9: (-105.204,-30.673,90.955)
O5': (-102.914,-35.210,91.669)
O3': (-104.863,-32.991,94.733)
OP1: (-106.899,-24.370,82.328)
OP2: (-106.846,-26.559,83.659)
C3': (-105.033,-23.172,85.925)
C1': (-105.744,-24.425,87.784)
C5': (-107.352,-23.133,84.832)
O4': (-106.879,-24.081,86.998)
C8: (-106.004,-26.878,86.876)
O2': (-104.549,-22.400,88.166)
C6: (-103.396,-28.634,88.599)
C5: (-104.398,-27.821,87.973)
C4: (-104.415,-26.488,88.330)
P: (-107.529,-25.277,83.326)
C4': (-106.532,-23.010,86.087)
C2': (-104.588,-23.540,87.331)
C2: (-102.717,-26.755,89.716)
N1: (-102.558,-28.061,89.480)
N3: (-103.592,-25.893,89.203)
N6: (-103.189,-29.937,88.420)
N7: (-105.419,-28.040,87.045)
N9: (-105.436,-25.877,87.631)
O5': (-107.846,-24.452,84.662)
O3': (-104.390,-22.032,85.402)
OP2: (-106.846,-26.559,83.659)
C3': (-105.033,-23.172,85.925)
C1': (-105.744,-24.425,87.784)
C5': (-107.352,-23.133,84.832)
O4': (-106.879,-24.081,86.998)
C8: (-106.004,-26.878,86.876)
O2': (-104.549,-22.400,88.166)
C6: (-103.396,-28.634,88.599)
C5: (-104.398,-27.821,87.973)
C4: (-104.415,-26.488,88.330)
P: (-107.529,-25.277,83.326)
C4': (-106.532,-23.010,86.087)
C2': (-104.588,-23.540,87.331)
C2: (-102.717,-26.755,89.716)
N1: (-102.558,-28.061,89.480)
N3: (-103.592,-25.893,89.203)
N6: (-103.189,-29.937,88.420)
N7: (-105.419,-28.040,87.045)
N9: (-105.436,-25.877,87.631)
O5': (-107.846,-24.452,84.662)
O3': (-104.390,-22.032,85.402)
Image (generated by PyMOL):