Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1120:1147
Extra
PDB:
ATOM 1 O3' A A 119 55.248 -38.572 160.966 1.00 75.71 O
ATOM 2 P A A 120 56.505 -38.512 161.969 1.00 71.77 P
ATOM 3 OP1 A A 120 56.080 -39.134 163.268 1.00 72.61 O
ATOM 4 OP2 A A 120 56.977 -37.108 161.968 1.00 71.62 O
ATOM 5 O5' A A 120 57.576 -39.445 161.257 1.00 71.65 O
ATOM 6 C5' A A 120 58.218 -39.051 160.055 1.00 70.96 C
ATOM 7 C4' A A 120 59.250 -40.067 159.651 1.00 71.04 C
ATOM 8 O4' A A 120 58.675 -41.383 159.754 1.00 71.25 O
ATOM 9 C3' A A 120 59.772 -39.961 158.234 1.00 70.27 C
ATOM 10 O3' A A 120 60.913 -39.117 158.155 1.00 70.26 O
ATOM 11 C2' A A 120 60.086 -41.407 157.857 1.00 70.35 C
ATOM 12 O2' A A 120 61.392 -41.742 158.269 1.00 70.87 O
ATOM 13 C1' A A 120 59.121 -42.205 158.720 1.00 70.85 C
ATOM 14 N9 A A 120 57.938 -42.725 157.991 1.00 70.34 N
ATOM 15 C8 A A 120 57.484 -44.022 158.082 1.00 70.57 C
ATOM 16 N7 A A 120 56.400 -44.270 157.406 1.00 70.07 N
ATOM 17 C5 A A 120 56.084 -43.047 156.840 1.00 69.46 C
ATOM 18 C6 A A 120 55.030 -42.637 155.997 1.00 68.75 C
ATOM 19 N6 A A 120 54.053 -43.435 155.557 1.00 68.52 N
ATOM 20 N1 A A 120 55.013 -41.358 155.589 1.00 68.28 N
ATOM 21 C2 A A 120 55.975 -40.553 156.023 1.00 68.52 C
ATOM 22 N3 A A 120 57.002 -40.813 156.831 1.00 69.18 N
ATOM 23 C4 A A 120 57.011 -42.089 157.205 1.00 69.62 C
ATOM 24 P U A 121 60.775 -37.535 157.860 1.00 64.92 P
ATOM 25 OP1 U A 121 62.110 -37.049 157.449 1.00 64.82 O
ATOM 26 OP2 U A 121 60.131 -36.910 159.026 1.00 65.41 O
ATOM 27 O5' U A 121 59.774 -37.496 156.634 1.00 64.03 O
TER
ATOM 1 O3' U B 146 53.834 -36.343 149.132 1.00 58.46 O
ATOM 2 P A B 147 55.112 -37.094 148.507 1.00 61.73 P
ATOM 3 OP1 A B 147 56.032 -36.028 148.068 1.00 61.46 O
ATOM 4 OP2 A B 147 54.621 -38.061 147.511 1.00 61.30 O
ATOM 5 O5' A B 147 55.739 -37.867 149.756 1.00 62.60 O
ATOM 6 C5' A B 147 56.471 -39.078 149.578 1.00 62.80 C
ATOM 7 C4' A B 147 57.541 -39.279 150.644 1.00 63.55 C
ATOM 8 O4' A B 147 56.929 -39.619 151.915 1.00 64.21 O
ATOM 9 C3' A B 147 58.506 -40.426 150.405 1.00 63.76 C
ATOM 10 O3' A B 147 59.533 -40.097 149.489 1.00 63.36 O
ATOM 11 C2' A B 147 59.021 -40.703 151.797 1.00 64.64 C
ATOM 12 O2' A B 147 59.941 -39.706 152.157 1.00 64.80 O
ATOM 13 C1' A B 147 57.773 -40.492 152.637 1.00 64.88 C
ATOM 14 N9 A B 147 57.062 -41.759 152.905 1.00 65.15 N
ATOM 15 C8 A B 147 55.830 -42.133 152.451 1.00 64.80 C
ATOM 16 N7 A B 147 55.452 -43.324 152.832 1.00 65.18 N
ATOM 17 C5 A B 147 56.513 -43.768 153.581 1.00 65.83 C
ATOM 18 C6 A B 147 56.698 -44.968 154.272 1.00 66.48 C
ATOM 19 N6 A B 147 55.757 -45.934 154.254 1.00 66.53 N
ATOM 20 N1 A B 147 57.842 -45.160 154.976 1.00 67.08 N
ATOM 21 C2 A B 147 58.724 -44.159 154.937 1.00 66.99 C
ATOM 22 N3 A B 147 58.646 -42.977 154.315 1.00 66.40 N
ATOM 23 C4 A B 147 57.496 -42.829 153.650 1.00 65.83 C
ATOM 24 P A B 148 60.004 -41.167 148.378 1.00 66.05 P
ATOM 25 OP1 A B 148 61.139 -40.550 147.600 1.00 65.71 O
ATOM 26 OP2 A B 148 58.782 -41.610 147.645 1.00 65.57 O
ATOM 27 O5' A B 148 60.553 -42.357 149.266 1.00 66.83 O
TER
ATOM 2 P A A 120 56.505 -38.512 161.969 1.00 71.77 P
ATOM 3 OP1 A A 120 56.080 -39.134 163.268 1.00 72.61 O
ATOM 4 OP2 A A 120 56.977 -37.108 161.968 1.00 71.62 O
ATOM 5 O5' A A 120 57.576 -39.445 161.257 1.00 71.65 O
ATOM 6 C5' A A 120 58.218 -39.051 160.055 1.00 70.96 C
ATOM 7 C4' A A 120 59.250 -40.067 159.651 1.00 71.04 C
ATOM 8 O4' A A 120 58.675 -41.383 159.754 1.00 71.25 O
ATOM 9 C3' A A 120 59.772 -39.961 158.234 1.00 70.27 C
ATOM 10 O3' A A 120 60.913 -39.117 158.155 1.00 70.26 O
ATOM 11 C2' A A 120 60.086 -41.407 157.857 1.00 70.35 C
ATOM 12 O2' A A 120 61.392 -41.742 158.269 1.00 70.87 O
ATOM 13 C1' A A 120 59.121 -42.205 158.720 1.00 70.85 C
ATOM 14 N9 A A 120 57.938 -42.725 157.991 1.00 70.34 N
ATOM 15 C8 A A 120 57.484 -44.022 158.082 1.00 70.57 C
ATOM 16 N7 A A 120 56.400 -44.270 157.406 1.00 70.07 N
ATOM 17 C5 A A 120 56.084 -43.047 156.840 1.00 69.46 C
ATOM 18 C6 A A 120 55.030 -42.637 155.997 1.00 68.75 C
ATOM 19 N6 A A 120 54.053 -43.435 155.557 1.00 68.52 N
ATOM 20 N1 A A 120 55.013 -41.358 155.589 1.00 68.28 N
ATOM 21 C2 A A 120 55.975 -40.553 156.023 1.00 68.52 C
ATOM 22 N3 A A 120 57.002 -40.813 156.831 1.00 69.18 N
ATOM 23 C4 A A 120 57.011 -42.089 157.205 1.00 69.62 C
ATOM 24 P U A 121 60.775 -37.535 157.860 1.00 64.92 P
ATOM 25 OP1 U A 121 62.110 -37.049 157.449 1.00 64.82 O
ATOM 26 OP2 U A 121 60.131 -36.910 159.026 1.00 65.41 O
ATOM 27 O5' U A 121 59.774 -37.496 156.634 1.00 64.03 O
TER
ATOM 1 O3' U B 146 53.834 -36.343 149.132 1.00 58.46 O
ATOM 2 P A B 147 55.112 -37.094 148.507 1.00 61.73 P
ATOM 3 OP1 A B 147 56.032 -36.028 148.068 1.00 61.46 O
ATOM 4 OP2 A B 147 54.621 -38.061 147.511 1.00 61.30 O
ATOM 5 O5' A B 147 55.739 -37.867 149.756 1.00 62.60 O
ATOM 6 C5' A B 147 56.471 -39.078 149.578 1.00 62.80 C
ATOM 7 C4' A B 147 57.541 -39.279 150.644 1.00 63.55 C
ATOM 8 O4' A B 147 56.929 -39.619 151.915 1.00 64.21 O
ATOM 9 C3' A B 147 58.506 -40.426 150.405 1.00 63.76 C
ATOM 10 O3' A B 147 59.533 -40.097 149.489 1.00 63.36 O
ATOM 11 C2' A B 147 59.021 -40.703 151.797 1.00 64.64 C
ATOM 12 O2' A B 147 59.941 -39.706 152.157 1.00 64.80 O
ATOM 13 C1' A B 147 57.773 -40.492 152.637 1.00 64.88 C
ATOM 14 N9 A B 147 57.062 -41.759 152.905 1.00 65.15 N
ATOM 15 C8 A B 147 55.830 -42.133 152.451 1.00 64.80 C
ATOM 16 N7 A B 147 55.452 -43.324 152.832 1.00 65.18 N
ATOM 17 C5 A B 147 56.513 -43.768 153.581 1.00 65.83 C
ATOM 18 C6 A B 147 56.698 -44.968 154.272 1.00 66.48 C
ATOM 19 N6 A B 147 55.757 -45.934 154.254 1.00 66.53 N
ATOM 20 N1 A B 147 57.842 -45.160 154.976 1.00 67.08 N
ATOM 21 C2 A B 147 58.724 -44.159 154.937 1.00 66.99 C
ATOM 22 N3 A B 147 58.646 -42.977 154.315 1.00 66.40 N
ATOM 23 C4 A B 147 57.496 -42.829 153.650 1.00 65.83 C
ATOM 24 P A B 148 60.004 -41.167 148.378 1.00 66.05 P
ATOM 25 OP1 A B 148 61.139 -40.550 147.600 1.00 65.71 O
ATOM 26 OP2 A B 148 58.782 -41.610 147.645 1.00 65.57 O
ATOM 27 O5' A B 148 60.553 -42.357 149.266 1.00 66.83 O
TER
Atoms:
OP1: (56.080,-39.134,163.268)
OP2: (56.977,-37.108,161.968)
C3': (59.772,-39.961,158.234)
C1': (59.121,-42.205,158.720)
C5': (58.218,-39.051,160.055)
O4': (58.675,-41.383,159.754)
C8: (57.484,-44.022,158.082)
O2': (61.392,-41.742,158.269)
C6: (55.030,-42.637,155.997)
C5: (56.084,-43.047,156.840)
C4: (57.011,-42.089,157.205)
P: (56.505,-38.512,161.969)
C4': (59.250,-40.067,159.651)
C2': (60.086,-41.407,157.857)
C2: (55.975,-40.553,156.023)
N1: (55.013,-41.358,155.589)
N3: (57.002,-40.813,156.831)
N6: (54.053,-43.435,155.557)
N7: (56.400,-44.270,157.406)
N9: (57.938,-42.725,157.991)
O5': (57.576,-39.445,161.257)
O3': (60.913,-39.117,158.155)
OP2: (56.977,-37.108,161.968)
C3': (59.772,-39.961,158.234)
C1': (59.121,-42.205,158.720)
C5': (58.218,-39.051,160.055)
O4': (58.675,-41.383,159.754)
C8: (57.484,-44.022,158.082)
O2': (61.392,-41.742,158.269)
C6: (55.030,-42.637,155.997)
C5: (56.084,-43.047,156.840)
C4: (57.011,-42.089,157.205)
P: (56.505,-38.512,161.969)
C4': (59.250,-40.067,159.651)
C2': (60.086,-41.407,157.857)
C2: (55.975,-40.553,156.023)
N1: (55.013,-41.358,155.589)
N3: (57.002,-40.813,156.831)
N6: (54.053,-43.435,155.557)
N7: (56.400,-44.270,157.406)
N9: (57.938,-42.725,157.991)
O5': (57.576,-39.445,161.257)
O3': (60.913,-39.117,158.155)
OP1: (56.032,-36.028,148.068)
OP2: (54.621,-38.061,147.511)
C3': (58.506,-40.426,150.405)
C1': (57.773,-40.492,152.637)
C5': (56.471,-39.078,149.578)
O4': (56.929,-39.619,151.915)
C8: (55.830,-42.133,152.451)
O2': (59.941,-39.706,152.157)
C6: (56.698,-44.968,154.272)
C5: (56.513,-43.768,153.581)
C4: (57.496,-42.829,153.650)
P: (55.112,-37.094,148.507)
C4': (57.541,-39.279,150.644)
C2': (59.021,-40.703,151.797)
C2: (58.724,-44.159,154.937)
N1: (57.842,-45.160,154.976)
N3: (58.646,-42.977,154.315)
N6: (55.757,-45.934,154.254)
N7: (55.452,-43.324,152.832)
N9: (57.062,-41.759,152.905)
O5': (55.739,-37.867,149.756)
O3': (59.533,-40.097,149.489)
OP2: (54.621,-38.061,147.511)
C3': (58.506,-40.426,150.405)
C1': (57.773,-40.492,152.637)
C5': (56.471,-39.078,149.578)
O4': (56.929,-39.619,151.915)
C8: (55.830,-42.133,152.451)
O2': (59.941,-39.706,152.157)
C6: (56.698,-44.968,154.272)
C5: (56.513,-43.768,153.581)
C4: (57.496,-42.829,153.650)
P: (55.112,-37.094,148.507)
C4': (57.541,-39.279,150.644)
C2': (59.021,-40.703,151.797)
C2: (58.724,-44.159,154.937)
N1: (57.842,-45.160,154.976)
N3: (58.646,-42.977,154.315)
N6: (55.757,-45.934,154.254)
N7: (55.452,-43.324,152.832)
N9: (57.062,-41.759,152.905)
O5': (55.739,-37.867,149.756)
O3': (59.533,-40.097,149.489)
Image (generated by PyMOL):