ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A123:A315

Extra

PDB:
ATOM 1 O3' U A 122 107.706 61.638 -6.195 1.00 47.12 O
ATOM 2 P A A 123 106.201 61.387 -5.687 1.00 48.34 P
ATOM 3 OP1 A A 123 105.419 60.762 -6.799 1.00 43.87 O
ATOM 4 OP2 A A 123 105.736 62.667 -5.089 1.00 43.87 O
ATOM 5 O5' A A 123 106.382 60.333 -4.507 1.00 48.34 O
ATOM 6 C5' A A 123 106.582 58.923 -4.754 1.00 48.34 C
ATOM 7 C4' A A 123 107.213 58.281 -3.540 1.00 48.34 C
ATOM 8 O4' A A 123 108.605 58.660 -3.493 1.00 48.34 O
ATOM 9 C3' A A 123 106.613 58.752 -2.221 1.00 48.34 C
ATOM 10 O3' A A 123 105.546 57.914 -1.812 1.00 48.34 O
ATOM 11 C2' A A 123 107.781 58.662 -1.259 1.00 48.34 C
ATOM 12 O2' A A 123 107.934 57.370 -0.720 1.00 48.34 O
ATOM 13 C1' A A 123 108.965 58.997 -2.169 1.00 48.34 C
ATOM 14 N9 A A 123 109.295 60.422 -2.151 1.00 43.87 N
ATOM 15 C8 A A 123 109.029 61.353 -3.127 1.00 43.87 C
ATOM 16 N7 A A 123 109.427 62.559 -2.824 1.00 43.87 N
ATOM 17 C5 A A 123 109.998 62.421 -1.567 1.00 43.87 C
ATOM 18 C6 A A 123 110.599 63.345 -0.692 1.00 43.87 C
ATOM 19 N6 A A 123 110.734 64.650 -0.962 1.00 43.87 N
ATOM 20 N1 A A 123 111.060 62.881 0.488 1.00 43.87 N
ATOM 21 C2 A A 123 110.921 61.581 0.763 1.00 43.87 C
ATOM 22 N3 A A 123 110.372 60.617 0.029 1.00 43.87 N
ATOM 23 C4 A A 123 109.926 61.109 -1.141 1.00 43.87 C
ATOM 24 P C A 124 104.112 58.549 -1.456 1.00 45.24 P
ATOM 25 OP1 C A 124 103.202 57.391 -1.289 1.00 56.04 O
ATOM 26 OP2 C A 124 103.775 59.598 -2.452 1.00 56.04 O
ATOM 27 O5' C A 124 104.344 59.225 -0.036 1.00 45.24 O
TER

ATOM 1 O3' G B 314 111.012 52.546 -6.094 1.00 43.75 O
ATOM 2 P A B 315 109.682 52.943 -6.880 1.00 52.77 P
ATOM 3 OP1 A B 315 108.566 52.799 -5.919 1.00 48.32 O
ATOM 4 OP2 A B 315 109.638 52.232 -8.179 1.00 48.32 O
ATOM 5 O5' A B 315 109.912 54.487 -7.166 1.00 52.77 O
ATOM 6 C5' A B 315 109.233 55.139 -8.235 1.00 52.77 C
ATOM 7 C4' A B 315 109.648 56.576 -8.295 1.00 52.77 C
ATOM 8 O4' A B 315 109.306 57.213 -7.046 1.00 52.77 O
ATOM 9 C3' A B 315 111.132 56.825 -8.435 1.00 52.77 C
ATOM 10 O3' A B 315 111.545 56.754 -9.783 1.00 52.77 O
ATOM 11 C2' A B 315 111.277 58.230 -7.878 1.00 52.77 C
ATOM 12 O2' A B 315 110.877 59.209 -8.828 1.00 52.77 O
ATOM 13 C1' A B 315 110.261 58.207 -6.740 1.00 52.77 C
ATOM 14 N9 A B 315 110.840 57.906 -5.431 1.00 48.32 N
ATOM 15 C8 A B 315 110.788 56.724 -4.731 1.00 48.32 C
ATOM 16 N7 A B 315 111.355 56.783 -3.549 1.00 48.32 N
ATOM 17 C5 A B 315 111.824 58.086 -3.471 1.00 48.32 C
ATOM 18 C6 A B 315 112.512 58.783 -2.465 1.00 48.32 C
ATOM 19 N6 A B 315 112.839 58.254 -1.281 1.00 48.32 N
ATOM 20 N1 A B 315 112.850 60.066 -2.712 1.00 48.32 N
ATOM 21 C2 A B 315 112.500 60.602 -3.888 1.00 48.32 C
ATOM 22 N3 A B 315 111.844 60.053 -4.907 1.00 48.32 N
ATOM 23 C4 A B 315 111.530 58.781 -4.631 1.00 48.32 C
ATOM 24 P G B 316 112.969 56.110 -10.129 1.00 41.36 P
ATOM 25 OP1 G B 316 113.134 56.146 -11.608 1.00 61.11 O
ATOM 26 OP2 G B 316 113.031 54.810 -9.417 1.00 61.11 O
ATOM 27 O5' G B 316 114.016 57.112 -9.461 1.00 41.36 O
TER

Atoms:
OP1: (105.419,60.762,-6.799)
OP2: (105.736,62.667,-5.089)
C3': (106.613,58.752,-2.221)
C1': (108.965,58.997,-2.169)
C5': (106.582,58.923,-4.754)
O4': (108.605,58.660,-3.493)
C8: (109.029,61.353,-3.127)
O2': (107.934,57.370,-0.720)
C6: (110.599,63.345,-0.692)
C5: (109.998,62.421,-1.567)
C4: (109.926,61.109,-1.141)
P: (106.201,61.387,-5.687)
C4': (107.213,58.281,-3.540)
C2': (107.781,58.662,-1.259)
C2: (110.921,61.581,0.763)
N1: (111.060,62.881,0.488)
N3: (110.372,60.617,0.029)
N6: (110.734,64.650,-0.962)
N7: (109.427,62.559,-2.824)
N9: (109.295,60.422,-2.151)
O5': (106.382,60.333,-4.507)
O3': (105.546,57.914,-1.812)
OP1: (108.566,52.799,-5.919)
OP2: (109.638,52.232,-8.179)
C3': (111.132,56.825,-8.435)
C1': (110.261,58.207,-6.740)
C5': (109.233,55.139,-8.235)
O4': (109.306,57.213,-7.046)
C8: (110.788,56.724,-4.731)
O2': (110.877,59.209,-8.828)
C6: (112.512,58.783,-2.465)
C5: (111.824,58.086,-3.471)
C4: (111.530,58.781,-4.631)
P: (109.682,52.943,-6.880)
C4': (109.648,56.576,-8.295)
C2': (111.277,58.230,-7.878)
C2: (112.500,60.602,-3.888)
N1: (112.850,60.066,-2.712)
N3: (111.844,60.053,-4.907)
N6: (112.839,58.254,-1.281)
N7: (111.355,56.783,-3.549)
N9: (110.840,57.906,-5.431)
O5': (109.912,54.487,-7.166)
O3': (111.545,56.754,-9.783)
Image (generated by PyMOL):
PyMOL image
show in jmol