Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0317:0335
Extra
PDB:
ATOM 1 O3' U A 316 18.708 124.899 21.597 1.00 58.49 O
ATOM 2 P A A 317 18.205 124.781 23.126 1.00 57.08 P
ATOM 3 OP1 A A 317 19.071 123.753 23.746 1.00 56.82 O
ATOM 4 OP2 A A 317 16.733 124.596 23.134 1.00 57.05 O
ATOM 5 O5' A A 317 18.495 126.207 23.791 1.00 55.99 O
ATOM 6 C5' A A 317 19.647 126.418 24.646 1.00 53.69 C
ATOM 7 C4' A A 317 19.630 127.812 25.246 1.00 52.08 C
ATOM 8 O4' A A 317 19.559 128.791 24.174 1.00 51.94 O
ATOM 9 C3' A A 317 18.483 128.152 26.195 1.00 51.39 C
ATOM 10 O3' A A 317 18.899 129.161 27.133 1.00 54.31 O
ATOM 11 C2' A A 317 17.491 128.827 25.258 1.00 51.71 C
ATOM 12 O2' A A 317 16.583 129.678 25.929 1.00 49.03 O
ATOM 13 C1' A A 317 18.445 129.632 24.381 1.00 52.69 C
ATOM 14 N9 A A 317 17.927 130.043 23.078 1.00 57.56 N
ATOM 15 C8 A A 317 17.230 129.309 22.145 1.00 57.74 C
ATOM 16 N7 A A 317 16.915 129.988 21.069 1.00 59.74 N
ATOM 17 C5 A A 317 17.436 131.253 21.308 1.00 61.05 C
ATOM 18 C6 A A 317 17.436 132.438 20.551 1.00 60.54 C
ATOM 19 N6 A A 317 16.865 132.550 19.353 1.00 60.53 N
ATOM 20 N1 A A 317 18.049 133.520 21.076 1.00 61.17 N
ATOM 21 C2 A A 317 18.618 133.412 22.281 1.00 61.57 C
ATOM 22 N3 A A 317 18.681 132.358 23.092 1.00 61.62 N
ATOM 23 C4 A A 317 18.065 131.298 22.540 1.00 60.39 C
ATOM 24 P C A 318 19.756 128.768 28.439 1.00 53.71 P
ATOM 25 OP1 C A 318 19.814 129.981 29.280 1.00 50.79 O
ATOM 26 OP2 C A 318 21.022 128.108 28.000 1.00 50.63 O
ATOM 27 O5' C A 318 18.869 127.688 29.202 1.00 53.65 O
TER
ATOM 1 O3' U B 334 25.851 129.297 26.029 1.00 53.39 O
ATOM 2 P A B 335 26.427 128.892 24.585 1.00 53.77 P
ATOM 3 OP1 A B 335 27.402 127.787 24.748 1.00 52.89 O
ATOM 4 OP2 A B 335 26.847 130.141 23.899 1.00 56.22 O
ATOM 5 O5' A B 335 25.152 128.307 23.831 1.00 57.03 O
ATOM 6 C5' A B 335 24.505 127.102 24.292 1.00 57.90 C
ATOM 7 C4' A B 335 23.423 126.684 23.326 1.00 60.31 C
ATOM 8 O4' A B 335 22.316 127.622 23.381 1.00 61.78 O
ATOM 9 C3' A B 335 23.817 126.652 21.860 1.00 60.23 C
ATOM 10 O3' A B 335 24.489 125.441 21.530 1.00 61.28 O
ATOM 11 C2' A B 335 22.469 126.778 21.164 1.00 61.59 C
ATOM 12 O2' A B 335 21.756 125.561 21.128 1.00 61.48 O
ATOM 13 C1' A B 335 21.734 127.745 22.095 1.00 62.77 C
ATOM 14 N9 A B 335 21.824 129.145 21.680 1.00 66.81 N
ATOM 15 C8 A B 335 22.658 130.125 22.167 1.00 67.60 C
ATOM 16 N7 A B 335 22.487 131.295 21.604 1.00 68.38 N
ATOM 17 C5 A B 335 21.477 131.073 20.677 1.00 68.91 C
ATOM 18 C6 A B 335 20.836 131.918 19.760 1.00 68.34 C
ATOM 19 N6 A B 335 21.118 133.213 19.624 1.00 68.71 N
ATOM 20 N1 A B 335 19.876 131.381 18.978 1.00 68.77 N
ATOM 21 C2 A B 335 19.583 130.085 19.120 1.00 68.04 C
ATOM 22 N3 A B 335 20.108 129.191 19.947 1.00 68.50 N
ATOM 23 C4 A B 335 21.063 129.753 20.709 1.00 68.81 C
ATOM 24 P C B 336 25.602 125.440 20.371 1.00 63.13 P
ATOM 25 OP1 C B 336 26.000 124.033 20.107 1.00 62.83 O
ATOM 26 OP2 C B 336 26.641 126.434 20.722 1.00 64.58 O
ATOM 27 O5' C B 336 24.823 126.000 19.099 1.00 65.30 O
TER
ATOM 2 P A A 317 18.205 124.781 23.126 1.00 57.08 P
ATOM 3 OP1 A A 317 19.071 123.753 23.746 1.00 56.82 O
ATOM 4 OP2 A A 317 16.733 124.596 23.134 1.00 57.05 O
ATOM 5 O5' A A 317 18.495 126.207 23.791 1.00 55.99 O
ATOM 6 C5' A A 317 19.647 126.418 24.646 1.00 53.69 C
ATOM 7 C4' A A 317 19.630 127.812 25.246 1.00 52.08 C
ATOM 8 O4' A A 317 19.559 128.791 24.174 1.00 51.94 O
ATOM 9 C3' A A 317 18.483 128.152 26.195 1.00 51.39 C
ATOM 10 O3' A A 317 18.899 129.161 27.133 1.00 54.31 O
ATOM 11 C2' A A 317 17.491 128.827 25.258 1.00 51.71 C
ATOM 12 O2' A A 317 16.583 129.678 25.929 1.00 49.03 O
ATOM 13 C1' A A 317 18.445 129.632 24.381 1.00 52.69 C
ATOM 14 N9 A A 317 17.927 130.043 23.078 1.00 57.56 N
ATOM 15 C8 A A 317 17.230 129.309 22.145 1.00 57.74 C
ATOM 16 N7 A A 317 16.915 129.988 21.069 1.00 59.74 N
ATOM 17 C5 A A 317 17.436 131.253 21.308 1.00 61.05 C
ATOM 18 C6 A A 317 17.436 132.438 20.551 1.00 60.54 C
ATOM 19 N6 A A 317 16.865 132.550 19.353 1.00 60.53 N
ATOM 20 N1 A A 317 18.049 133.520 21.076 1.00 61.17 N
ATOM 21 C2 A A 317 18.618 133.412 22.281 1.00 61.57 C
ATOM 22 N3 A A 317 18.681 132.358 23.092 1.00 61.62 N
ATOM 23 C4 A A 317 18.065 131.298 22.540 1.00 60.39 C
ATOM 24 P C A 318 19.756 128.768 28.439 1.00 53.71 P
ATOM 25 OP1 C A 318 19.814 129.981 29.280 1.00 50.79 O
ATOM 26 OP2 C A 318 21.022 128.108 28.000 1.00 50.63 O
ATOM 27 O5' C A 318 18.869 127.688 29.202 1.00 53.65 O
TER
ATOM 1 O3' U B 334 25.851 129.297 26.029 1.00 53.39 O
ATOM 2 P A B 335 26.427 128.892 24.585 1.00 53.77 P
ATOM 3 OP1 A B 335 27.402 127.787 24.748 1.00 52.89 O
ATOM 4 OP2 A B 335 26.847 130.141 23.899 1.00 56.22 O
ATOM 5 O5' A B 335 25.152 128.307 23.831 1.00 57.03 O
ATOM 6 C5' A B 335 24.505 127.102 24.292 1.00 57.90 C
ATOM 7 C4' A B 335 23.423 126.684 23.326 1.00 60.31 C
ATOM 8 O4' A B 335 22.316 127.622 23.381 1.00 61.78 O
ATOM 9 C3' A B 335 23.817 126.652 21.860 1.00 60.23 C
ATOM 10 O3' A B 335 24.489 125.441 21.530 1.00 61.28 O
ATOM 11 C2' A B 335 22.469 126.778 21.164 1.00 61.59 C
ATOM 12 O2' A B 335 21.756 125.561 21.128 1.00 61.48 O
ATOM 13 C1' A B 335 21.734 127.745 22.095 1.00 62.77 C
ATOM 14 N9 A B 335 21.824 129.145 21.680 1.00 66.81 N
ATOM 15 C8 A B 335 22.658 130.125 22.167 1.00 67.60 C
ATOM 16 N7 A B 335 22.487 131.295 21.604 1.00 68.38 N
ATOM 17 C5 A B 335 21.477 131.073 20.677 1.00 68.91 C
ATOM 18 C6 A B 335 20.836 131.918 19.760 1.00 68.34 C
ATOM 19 N6 A B 335 21.118 133.213 19.624 1.00 68.71 N
ATOM 20 N1 A B 335 19.876 131.381 18.978 1.00 68.77 N
ATOM 21 C2 A B 335 19.583 130.085 19.120 1.00 68.04 C
ATOM 22 N3 A B 335 20.108 129.191 19.947 1.00 68.50 N
ATOM 23 C4 A B 335 21.063 129.753 20.709 1.00 68.81 C
ATOM 24 P C B 336 25.602 125.440 20.371 1.00 63.13 P
ATOM 25 OP1 C B 336 26.000 124.033 20.107 1.00 62.83 O
ATOM 26 OP2 C B 336 26.641 126.434 20.722 1.00 64.58 O
ATOM 27 O5' C B 336 24.823 126.000 19.099 1.00 65.30 O
TER
Atoms:
OP1: (19.071,123.753,23.746)
OP2: (16.733,124.596,23.134)
C3': (18.483,128.152,26.195)
C1': (18.445,129.632,24.381)
C5': (19.647,126.418,24.646)
O4': (19.559,128.791,24.174)
C8: (17.230,129.309,22.145)
O2': (16.583,129.678,25.929)
C6: (17.436,132.438,20.551)
C5: (17.436,131.253,21.308)
C4: (18.065,131.298,22.540)
P: (18.205,124.781,23.126)
C4': (19.630,127.812,25.246)
C2': (17.491,128.827,25.258)
C2: (18.618,133.412,22.281)
N1: (18.049,133.520,21.076)
N3: (18.681,132.358,23.092)
N6: (16.865,132.550,19.353)
N7: (16.915,129.988,21.069)
N9: (17.927,130.043,23.078)
O5': (18.495,126.207,23.791)
O3': (18.899,129.161,27.133)
OP2: (16.733,124.596,23.134)
C3': (18.483,128.152,26.195)
C1': (18.445,129.632,24.381)
C5': (19.647,126.418,24.646)
O4': (19.559,128.791,24.174)
C8: (17.230,129.309,22.145)
O2': (16.583,129.678,25.929)
C6: (17.436,132.438,20.551)
C5: (17.436,131.253,21.308)
C4: (18.065,131.298,22.540)
P: (18.205,124.781,23.126)
C4': (19.630,127.812,25.246)
C2': (17.491,128.827,25.258)
C2: (18.618,133.412,22.281)
N1: (18.049,133.520,21.076)
N3: (18.681,132.358,23.092)
N6: (16.865,132.550,19.353)
N7: (16.915,129.988,21.069)
N9: (17.927,130.043,23.078)
O5': (18.495,126.207,23.791)
O3': (18.899,129.161,27.133)
OP1: (27.402,127.787,24.748)
OP2: (26.847,130.141,23.899)
C3': (23.817,126.652,21.860)
C1': (21.734,127.745,22.095)
C5': (24.505,127.102,24.292)
O4': (22.316,127.622,23.381)
C8: (22.658,130.125,22.167)
O2': (21.756,125.561,21.128)
C6: (20.836,131.918,19.760)
C5: (21.477,131.073,20.677)
C4: (21.063,129.753,20.709)
P: (26.427,128.892,24.585)
C4': (23.423,126.684,23.326)
C2': (22.469,126.778,21.164)
C2: (19.583,130.085,19.120)
N1: (19.876,131.381,18.978)
N3: (20.108,129.191,19.947)
N6: (21.118,133.213,19.624)
N7: (22.487,131.295,21.604)
N9: (21.824,129.145,21.680)
O5': (25.152,128.307,23.831)
O3': (24.489,125.441,21.530)
OP2: (26.847,130.141,23.899)
C3': (23.817,126.652,21.860)
C1': (21.734,127.745,22.095)
C5': (24.505,127.102,24.292)
O4': (22.316,127.622,23.381)
C8: (22.658,130.125,22.167)
O2': (21.756,125.561,21.128)
C6: (20.836,131.918,19.760)
C5: (21.477,131.073,20.677)
C4: (21.063,129.753,20.709)
P: (26.427,128.892,24.585)
C4': (23.423,126.684,23.326)
C2': (22.469,126.778,21.164)
C2: (19.583,130.085,19.120)
N1: (19.876,131.381,18.978)
N3: (20.108,129.191,19.947)
N6: (21.118,133.213,19.624)
N7: (22.487,131.295,21.604)
N9: (21.824,129.145,21.680)
O5': (25.152,128.307,23.831)
O3': (24.489,125.441,21.530)
Image (generated by PyMOL):