Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01191:02394
Extra
PDB:
ATOM 1 O3' A A1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 2 P A A1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 3 OP1 A A1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 4 OP2 A A1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 5 O5' A A1191 53.811 113.691 128.903 1.00 41.47 O
ATOM 6 C5' A A1191 54.006 115.062 129.272 1.00 42.26 C
ATOM 7 C4' A A1191 54.455 115.888 128.090 1.00 42.83 C
ATOM 8 O4' A A1191 55.869 115.698 127.864 1.00 42.07 O
ATOM 9 C3' A A1191 53.774 115.645 126.746 1.00 43.50 C
ATOM 10 O3' A A1191 53.408 116.887 126.179 1.00 44.16 O
ATOM 11 C2' A A1191 54.886 115.038 125.897 1.00 43.88 C
ATOM 12 O2' A A1191 54.757 115.390 124.537 1.00 44.76 O
ATOM 13 C1' A A1191 56.111 115.727 126.482 1.00 44.36 C
ATOM 14 N9 A A1191 57.395 115.072 126.229 1.00 46.02 N
ATOM 15 C8 A A1191 57.668 113.985 125.433 1.00 47.17 C
ATOM 16 N7 A A1191 58.933 113.643 125.426 1.00 48.39 N
ATOM 17 C5 A A1191 59.533 114.565 126.270 1.00 46.24 C
ATOM 18 C6 A A1191 60.857 114.736 126.685 1.00 46.87 C
ATOM 19 N6 A A1191 61.861 113.949 126.293 1.00 49.39 N
ATOM 20 N1 A A1191 61.124 115.752 127.531 1.00 46.54 N
ATOM 21 C2 A A1191 60.117 116.531 127.932 1.00 45.42 C
ATOM 22 N3 A A1191 58.831 116.467 127.618 1.00 45.56 N
ATOM 23 C4 A A1191 58.601 115.450 126.771 1.00 45.97 C
ATOM 24 P A A1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 25 OP1 A A1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 26 OP2 A A1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 27 O5' A A1192 51.857 118.679 125.353 1.00 45.12 O
TER
ATOM 1 O3' C B2393 58.322 115.761 134.241 1.00 42.41 O
ATOM 2 P A B2394 57.664 114.745 135.292 1.00 45.37 P
ATOM 3 OP1 A B2394 56.628 113.943 134.586 1.00 43.72 O
ATOM 4 OP2 A B2394 57.284 115.520 136.494 1.00 45.42 O
ATOM 5 O5' A B2394 58.883 113.799 135.676 1.00 44.03 O
ATOM 6 C5' A B2394 59.689 113.203 134.656 1.00 42.40 C
ATOM 7 C4' A B2394 61.151 113.449 134.935 1.00 43.77 C
ATOM 8 O4' A B2394 61.950 112.678 134.010 1.00 44.22 O
ATOM 9 C3' A B2394 61.645 114.881 134.790 1.00 44.26 C
ATOM 10 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 11 C2' A B2394 61.989 114.942 133.311 1.00 45.37 C
ATOM 12 O2' A B2394 62.946 115.951 133.058 1.00 44.54 O
ATOM 13 C1' A B2394 62.575 113.544 133.086 1.00 46.02 C
ATOM 14 N9 A B2394 62.388 112.956 131.760 1.00 47.02 N
ATOM 15 C8 A B2394 63.322 112.241 131.058 1.00 48.37 C
ATOM 16 N7 A B2394 62.880 111.768 129.920 1.00 50.07 N
ATOM 17 C5 A B2394 61.568 112.215 129.859 1.00 48.12 C
ATOM 18 C6 A B2394 60.561 112.048 128.899 1.00 48.05 C
ATOM 19 N6 A B2394 60.732 111.368 127.763 1.00 46.61 N
ATOM 20 N1 A B2394 59.361 112.615 129.144 1.00 47.95 N
ATOM 21 C2 A B2394 59.202 113.309 130.279 1.00 47.02 C
ATOM 22 N3 A B2394 60.076 113.543 131.252 1.00 46.14 N
ATOM 23 C4 A B2394 61.254 112.959 130.980 1.00 46.60 C
ATOM 24 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 25 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 26 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 27 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
TER
ATOM 2 P A A1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 3 OP1 A A1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 4 OP2 A A1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 5 O5' A A1191 53.811 113.691 128.903 1.00 41.47 O
ATOM 6 C5' A A1191 54.006 115.062 129.272 1.00 42.26 C
ATOM 7 C4' A A1191 54.455 115.888 128.090 1.00 42.83 C
ATOM 8 O4' A A1191 55.869 115.698 127.864 1.00 42.07 O
ATOM 9 C3' A A1191 53.774 115.645 126.746 1.00 43.50 C
ATOM 10 O3' A A1191 53.408 116.887 126.179 1.00 44.16 O
ATOM 11 C2' A A1191 54.886 115.038 125.897 1.00 43.88 C
ATOM 12 O2' A A1191 54.757 115.390 124.537 1.00 44.76 O
ATOM 13 C1' A A1191 56.111 115.727 126.482 1.00 44.36 C
ATOM 14 N9 A A1191 57.395 115.072 126.229 1.00 46.02 N
ATOM 15 C8 A A1191 57.668 113.985 125.433 1.00 47.17 C
ATOM 16 N7 A A1191 58.933 113.643 125.426 1.00 48.39 N
ATOM 17 C5 A A1191 59.533 114.565 126.270 1.00 46.24 C
ATOM 18 C6 A A1191 60.857 114.736 126.685 1.00 46.87 C
ATOM 19 N6 A A1191 61.861 113.949 126.293 1.00 49.39 N
ATOM 20 N1 A A1191 61.124 115.752 127.531 1.00 46.54 N
ATOM 21 C2 A A1191 60.117 116.531 127.932 1.00 45.42 C
ATOM 22 N3 A A1191 58.831 116.467 127.618 1.00 45.56 N
ATOM 23 C4 A A1191 58.601 115.450 126.771 1.00 45.97 C
ATOM 24 P A A1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 25 OP1 A A1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 26 OP2 A A1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 27 O5' A A1192 51.857 118.679 125.353 1.00 45.12 O
TER
ATOM 1 O3' C B2393 58.322 115.761 134.241 1.00 42.41 O
ATOM 2 P A B2394 57.664 114.745 135.292 1.00 45.37 P
ATOM 3 OP1 A B2394 56.628 113.943 134.586 1.00 43.72 O
ATOM 4 OP2 A B2394 57.284 115.520 136.494 1.00 45.42 O
ATOM 5 O5' A B2394 58.883 113.799 135.676 1.00 44.03 O
ATOM 6 C5' A B2394 59.689 113.203 134.656 1.00 42.40 C
ATOM 7 C4' A B2394 61.151 113.449 134.935 1.00 43.77 C
ATOM 8 O4' A B2394 61.950 112.678 134.010 1.00 44.22 O
ATOM 9 C3' A B2394 61.645 114.881 134.790 1.00 44.26 C
ATOM 10 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 11 C2' A B2394 61.989 114.942 133.311 1.00 45.37 C
ATOM 12 O2' A B2394 62.946 115.951 133.058 1.00 44.54 O
ATOM 13 C1' A B2394 62.575 113.544 133.086 1.00 46.02 C
ATOM 14 N9 A B2394 62.388 112.956 131.760 1.00 47.02 N
ATOM 15 C8 A B2394 63.322 112.241 131.058 1.00 48.37 C
ATOM 16 N7 A B2394 62.880 111.768 129.920 1.00 50.07 N
ATOM 17 C5 A B2394 61.568 112.215 129.859 1.00 48.12 C
ATOM 18 C6 A B2394 60.561 112.048 128.899 1.00 48.05 C
ATOM 19 N6 A B2394 60.732 111.368 127.763 1.00 46.61 N
ATOM 20 N1 A B2394 59.361 112.615 129.144 1.00 47.95 N
ATOM 21 C2 A B2394 59.202 113.309 130.279 1.00 47.02 C
ATOM 22 N3 A B2394 60.076 113.543 131.252 1.00 46.14 N
ATOM 23 C4 A B2394 61.254 112.959 130.980 1.00 46.60 C
ATOM 24 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 25 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 26 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 27 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
TER
Atoms:
OP1: (51.601,113.534,130.009)
OP2: (52.773,111.423,129.162)
C3': (53.774,115.645,126.746)
C1': (56.111,115.727,126.482)
C5': (54.006,115.062,129.272)
O4': (55.869,115.698,127.864)
C8: (57.668,113.985,125.433)
O2': (54.757,115.390,124.537)
C6: (60.857,114.736,126.685)
C5: (59.533,114.565,126.270)
C4: (58.601,115.450,126.771)
P: (52.848,112.768,129.774)
C4': (54.455,115.888,128.090)
C2': (54.886,115.038,125.897)
C2: (60.117,116.531,127.932)
N1: (61.124,115.752,127.531)
N3: (58.831,116.467,127.618)
N6: (61.861,113.949,126.293)
N7: (58.933,113.643,125.426)
N9: (57.395,115.072,126.229)
O5': (53.811,113.691,128.903)
O3': (53.408,116.887,126.179)
OP2: (52.773,111.423,129.162)
C3': (53.774,115.645,126.746)
C1': (56.111,115.727,126.482)
C5': (54.006,115.062,129.272)
O4': (55.869,115.698,127.864)
C8: (57.668,113.985,125.433)
O2': (54.757,115.390,124.537)
C6: (60.857,114.736,126.685)
C5: (59.533,114.565,126.270)
C4: (58.601,115.450,126.771)
P: (52.848,112.768,129.774)
C4': (54.455,115.888,128.090)
C2': (54.886,115.038,125.897)
C2: (60.117,116.531,127.932)
N1: (61.124,115.752,127.531)
N3: (58.831,116.467,127.618)
N6: (61.861,113.949,126.293)
N7: (58.933,113.643,125.426)
N9: (57.395,115.072,126.229)
O5': (53.811,113.691,128.903)
O3': (53.408,116.887,126.179)
OP1: (56.628,113.943,134.586)
OP2: (57.284,115.520,136.494)
C3': (61.645,114.881,134.790)
C1': (62.575,113.544,133.086)
C5': (59.689,113.203,134.656)
O4': (61.950,112.678,134.010)
C8: (63.322,112.241,131.058)
O2': (62.946,115.951,133.058)
C6: (60.561,112.048,128.899)
C5: (61.568,112.215,129.859)
C4: (61.254,112.959,130.980)
P: (57.664,114.745,135.292)
C4': (61.151,113.449,134.935)
C2': (61.989,114.942,133.311)
C2: (59.202,113.309,130.279)
N1: (59.361,112.615,129.144)
N3: (60.076,113.543,131.252)
N6: (60.732,111.368,127.763)
N7: (62.880,111.768,129.920)
N9: (62.388,112.956,131.760)
O5': (58.883,113.799,135.676)
O3': (62.851,115.016,135.532)
OP2: (57.284,115.520,136.494)
C3': (61.645,114.881,134.790)
C1': (62.575,113.544,133.086)
C5': (59.689,113.203,134.656)
O4': (61.950,112.678,134.010)
C8: (63.322,112.241,131.058)
O2': (62.946,115.951,133.058)
C6: (60.561,112.048,128.899)
C5: (61.568,112.215,129.859)
C4: (61.254,112.959,130.980)
P: (57.664,114.745,135.292)
C4': (61.151,113.449,134.935)
C2': (61.989,114.942,133.311)
C2: (59.202,113.309,130.279)
N1: (59.361,112.615,129.144)
N3: (60.076,113.543,131.252)
N6: (60.732,111.368,127.763)
N7: (62.880,111.768,129.920)
N9: (62.388,112.956,131.760)
O5': (58.883,113.799,135.676)
O3': (62.851,115.016,135.532)
Image (generated by PyMOL):