Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3S49:E6:F2
Extra
PDB:
ATOM 1 P A A 6 8.100 25.932 60.691 1.00 44.72 P
ATOM 2 OP1 A A 6 8.385 26.907 61.767 1.00 48.06 O
ATOM 3 OP2 A A 6 8.672 24.577 60.739 1.00 45.32 O
ATOM 4 O5' A A 6 6.520 25.767 60.568 1.00 44.15 O
ATOM 5 C5' A A 6 5.622 26.869 60.645 1.00 43.11 C
ATOM 6 C4' A A 6 4.230 26.358 60.342 1.00 42.59 C
ATOM 7 O4' A A 6 4.225 25.678 59.063 1.00 41.52 O
ATOM 8 C3' A A 6 3.716 25.295 61.305 1.00 43.04 C
ATOM 9 O3' A A 6 3.176 25.894 62.462 1.00 44.81 O
ATOM 10 C2' A A 6 2.654 24.605 60.459 1.00 42.29 C
ATOM 11 O2' A A 6 1.465 25.356 60.311 1.00 41.43 O
ATOM 12 C1' A A 6 3.386 24.535 59.124 1.00 41.42 C
ATOM 13 N9 A A 6 4.138 23.281 58.927 1.00 41.27 N
ATOM 14 C8 A A 6 5.486 23.058 59.042 1.00 40.88 C
ATOM 15 N7 A A 6 5.837 21.813 58.806 1.00 41.83 N
ATOM 16 C5 A A 6 4.638 21.173 58.518 1.00 41.23 C
ATOM 17 C6 A A 6 4.305 19.842 58.179 1.00 41.69 C
ATOM 18 N6 A A 6 5.195 18.854 58.057 1.00 42.45 N
ATOM 19 N1 A A 6 3.006 19.548 57.964 1.00 41.65 N
ATOM 20 C2 A A 6 2.088 20.515 58.078 1.00 41.02 C
ATOM 21 N3 A A 6 2.277 21.794 58.384 1.00 40.56 N
ATOM 22 C4 A A 6 3.582 22.062 58.591 1.00 40.90 C
ATOM 23 P C A 7 3.344 25.184 63.875 1.00 47.20 P
ATOM 24 OP1 C A 7 2.819 26.128 64.885 1.00 49.55 O
ATOM 25 OP2 C A 7 4.732 24.679 63.980 1.00 46.05 O
ATOM 26 O5' C A 7 2.336 23.947 63.804 1.00 48.08 O
TER
ATOM 1 O3' U B 1 -3.032 14.443 54.087 1.00 48.63 O
ATOM 2 P A B 2 -2.665 14.947 52.615 1.00 46.94 P
ATOM 3 OP1 A B 2 -3.764 14.578 51.708 1.00 48.35 O
ATOM 4 OP2 A B 2 -1.287 14.517 52.290 1.00 46.16 O
ATOM 5 O5' A B 2 -2.653 16.538 52.794 1.00 44.70 O
ATOM 6 C5' A B 2 -3.839 17.279 53.072 1.00 43.16 C
ATOM 7 C4' A B 2 -3.490 18.730 53.347 1.00 40.15 C
ATOM 8 O4' A B 2 -2.652 18.809 54.525 1.00 40.61 O
ATOM 9 C3' A B 2 -2.627 19.414 52.299 1.00 38.15 C
ATOM 10 O3' A B 2 -3.364 19.795 51.151 1.00 37.24 O
ATOM 11 C2' A B 2 -2.111 20.602 53.102 1.00 36.58 C
ATOM 12 O2' A B 2 -3.094 21.574 53.379 1.00 35.79 O
ATOM 13 C1' A B 2 -1.729 19.875 54.385 1.00 38.36 C
ATOM 14 N9 A B 2 -0.352 19.367 54.344 1.00 37.72 N
ATOM 15 C8 A B 2 0.062 18.102 54.026 1.00 37.34 C
ATOM 16 N7 A B 2 1.363 17.955 54.068 1.00 38.16 N
ATOM 17 C5 A B 2 1.838 19.204 54.446 1.00 36.79 C
ATOM 18 C6 A B 2 3.139 19.715 54.669 1.00 36.52 C
ATOM 19 N6 A B 2 4.255 18.983 54.548 1.00 37.48 N
ATOM 20 N1 A B 2 3.255 21.017 55.017 1.00 35.62 N
ATOM 21 C2 A B 2 2.146 21.759 55.136 1.00 35.51 C
ATOM 22 N3 A B 2 0.877 21.392 54.967 1.00 35.23 N
ATOM 23 C4 A B 2 0.790 20.091 54.616 1.00 36.18 C
ATOM 24 P U B 3 -2.666 19.771 49.715 1.00 36.21 P
ATOM 25 OP1 U B 3 -3.731 20.117 48.753 1.00 35.43 O
ATOM 26 OP2 U B 3 -1.902 18.513 49.548 1.00 38.02 O
ATOM 27 O5' U B 3 -1.572 20.931 49.801 1.00 34.94 O
TER
ATOM 2 OP1 A A 6 8.385 26.907 61.767 1.00 48.06 O
ATOM 3 OP2 A A 6 8.672 24.577 60.739 1.00 45.32 O
ATOM 4 O5' A A 6 6.520 25.767 60.568 1.00 44.15 O
ATOM 5 C5' A A 6 5.622 26.869 60.645 1.00 43.11 C
ATOM 6 C4' A A 6 4.230 26.358 60.342 1.00 42.59 C
ATOM 7 O4' A A 6 4.225 25.678 59.063 1.00 41.52 O
ATOM 8 C3' A A 6 3.716 25.295 61.305 1.00 43.04 C
ATOM 9 O3' A A 6 3.176 25.894 62.462 1.00 44.81 O
ATOM 10 C2' A A 6 2.654 24.605 60.459 1.00 42.29 C
ATOM 11 O2' A A 6 1.465 25.356 60.311 1.00 41.43 O
ATOM 12 C1' A A 6 3.386 24.535 59.124 1.00 41.42 C
ATOM 13 N9 A A 6 4.138 23.281 58.927 1.00 41.27 N
ATOM 14 C8 A A 6 5.486 23.058 59.042 1.00 40.88 C
ATOM 15 N7 A A 6 5.837 21.813 58.806 1.00 41.83 N
ATOM 16 C5 A A 6 4.638 21.173 58.518 1.00 41.23 C
ATOM 17 C6 A A 6 4.305 19.842 58.179 1.00 41.69 C
ATOM 18 N6 A A 6 5.195 18.854 58.057 1.00 42.45 N
ATOM 19 N1 A A 6 3.006 19.548 57.964 1.00 41.65 N
ATOM 20 C2 A A 6 2.088 20.515 58.078 1.00 41.02 C
ATOM 21 N3 A A 6 2.277 21.794 58.384 1.00 40.56 N
ATOM 22 C4 A A 6 3.582 22.062 58.591 1.00 40.90 C
ATOM 23 P C A 7 3.344 25.184 63.875 1.00 47.20 P
ATOM 24 OP1 C A 7 2.819 26.128 64.885 1.00 49.55 O
ATOM 25 OP2 C A 7 4.732 24.679 63.980 1.00 46.05 O
ATOM 26 O5' C A 7 2.336 23.947 63.804 1.00 48.08 O
TER
ATOM 1 O3' U B 1 -3.032 14.443 54.087 1.00 48.63 O
ATOM 2 P A B 2 -2.665 14.947 52.615 1.00 46.94 P
ATOM 3 OP1 A B 2 -3.764 14.578 51.708 1.00 48.35 O
ATOM 4 OP2 A B 2 -1.287 14.517 52.290 1.00 46.16 O
ATOM 5 O5' A B 2 -2.653 16.538 52.794 1.00 44.70 O
ATOM 6 C5' A B 2 -3.839 17.279 53.072 1.00 43.16 C
ATOM 7 C4' A B 2 -3.490 18.730 53.347 1.00 40.15 C
ATOM 8 O4' A B 2 -2.652 18.809 54.525 1.00 40.61 O
ATOM 9 C3' A B 2 -2.627 19.414 52.299 1.00 38.15 C
ATOM 10 O3' A B 2 -3.364 19.795 51.151 1.00 37.24 O
ATOM 11 C2' A B 2 -2.111 20.602 53.102 1.00 36.58 C
ATOM 12 O2' A B 2 -3.094 21.574 53.379 1.00 35.79 O
ATOM 13 C1' A B 2 -1.729 19.875 54.385 1.00 38.36 C
ATOM 14 N9 A B 2 -0.352 19.367 54.344 1.00 37.72 N
ATOM 15 C8 A B 2 0.062 18.102 54.026 1.00 37.34 C
ATOM 16 N7 A B 2 1.363 17.955 54.068 1.00 38.16 N
ATOM 17 C5 A B 2 1.838 19.204 54.446 1.00 36.79 C
ATOM 18 C6 A B 2 3.139 19.715 54.669 1.00 36.52 C
ATOM 19 N6 A B 2 4.255 18.983 54.548 1.00 37.48 N
ATOM 20 N1 A B 2 3.255 21.017 55.017 1.00 35.62 N
ATOM 21 C2 A B 2 2.146 21.759 55.136 1.00 35.51 C
ATOM 22 N3 A B 2 0.877 21.392 54.967 1.00 35.23 N
ATOM 23 C4 A B 2 0.790 20.091 54.616 1.00 36.18 C
ATOM 24 P U B 3 -2.666 19.771 49.715 1.00 36.21 P
ATOM 25 OP1 U B 3 -3.731 20.117 48.753 1.00 35.43 O
ATOM 26 OP2 U B 3 -1.902 18.513 49.548 1.00 38.02 O
ATOM 27 O5' U B 3 -1.572 20.931 49.801 1.00 34.94 O
TER
Atoms:
OP1: (8.385,26.907,61.767)
OP2: (8.672,24.577,60.739)
C3': (3.716,25.295,61.305)
C1': (3.386,24.535,59.124)
C5': (5.622,26.869,60.645)
O4': (4.225,25.678,59.063)
C8: (5.486,23.058,59.042)
O2': (1.465,25.356,60.311)
C6: (4.305,19.842,58.179)
C5: (4.638,21.173,58.518)
C4: (3.582,22.062,58.591)
P: (8.100,25.932,60.691)
C4': (4.230,26.358,60.342)
C2': (2.654,24.605,60.459)
C2: (2.088,20.515,58.078)
N1: (3.006,19.548,57.964)
N3: (2.277,21.794,58.384)
N6: (5.195,18.854,58.057)
N7: (5.837,21.813,58.806)
N9: (4.138,23.281,58.927)
O5': (6.520,25.767,60.568)
O3': (3.176,25.894,62.462)
OP2: (8.672,24.577,60.739)
C3': (3.716,25.295,61.305)
C1': (3.386,24.535,59.124)
C5': (5.622,26.869,60.645)
O4': (4.225,25.678,59.063)
C8: (5.486,23.058,59.042)
O2': (1.465,25.356,60.311)
C6: (4.305,19.842,58.179)
C5: (4.638,21.173,58.518)
C4: (3.582,22.062,58.591)
P: (8.100,25.932,60.691)
C4': (4.230,26.358,60.342)
C2': (2.654,24.605,60.459)
C2: (2.088,20.515,58.078)
N1: (3.006,19.548,57.964)
N3: (2.277,21.794,58.384)
N6: (5.195,18.854,58.057)
N7: (5.837,21.813,58.806)
N9: (4.138,23.281,58.927)
O5': (6.520,25.767,60.568)
O3': (3.176,25.894,62.462)
OP1: (-3.764,14.578,51.708)
OP2: (-1.287,14.517,52.290)
C3': (-2.627,19.414,52.299)
C1': (-1.729,19.875,54.385)
C5': (-3.839,17.279,53.072)
O4': (-2.652,18.809,54.525)
C8: (0.062,18.102,54.026)
O2': (-3.094,21.574,53.379)
C6: (3.139,19.715,54.669)
C5: (1.838,19.204,54.446)
C4: (0.790,20.091,54.616)
P: (-2.665,14.947,52.615)
C4': (-3.490,18.730,53.347)
C2': (-2.111,20.602,53.102)
C2: (2.146,21.759,55.136)
N1: (3.255,21.017,55.017)
N3: (0.877,21.392,54.967)
N6: (4.255,18.983,54.548)
N7: (1.363,17.955,54.068)
N9: (-0.352,19.367,54.344)
O5': (-2.653,16.538,52.794)
O3': (-3.364,19.795,51.151)
OP2: (-1.287,14.517,52.290)
C3': (-2.627,19.414,52.299)
C1': (-1.729,19.875,54.385)
C5': (-3.839,17.279,53.072)
O4': (-2.652,18.809,54.525)
C8: (0.062,18.102,54.026)
O2': (-3.094,21.574,53.379)
C6: (3.139,19.715,54.669)
C5: (1.838,19.204,54.446)
C4: (0.790,20.091,54.616)
P: (-2.665,14.947,52.615)
C4': (-3.490,18.730,53.347)
C2': (-2.111,20.602,53.102)
C2: (2.146,21.759,55.136)
N1: (3.255,21.017,55.017)
N3: (0.877,21.392,54.967)
N6: (4.255,18.983,54.548)
N7: (1.363,17.955,54.068)
N9: (-0.352,19.367,54.344)
O5': (-2.653,16.538,52.794)
O3': (-3.364,19.795,51.151)
Image (generated by PyMOL):