Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B9:B58
Extra
PDB:
ATOM 1 O3' A A 8 27.090 -6.888 -35.235 1.00 37.13 O
ATOM 2 P A A 9 28.290 -5.873 -35.579 1.00 39.20 P
ATOM 3 OP1 A A 9 27.670 -4.593 -35.999 1.00 40.49 O
ATOM 4 OP2 A A 9 29.196 -6.567 -36.521 1.00 41.61 O
ATOM 5 O5' A A 9 29.014 -5.684 -34.176 1.00 40.54 O
ATOM 6 C5' A A 9 29.775 -6.735 -33.603 1.00 43.93 C
ATOM 7 C4' A A 9 31.100 -6.238 -33.092 1.00 41.34 C
ATOM 8 O4' A A 9 31.941 -5.846 -34.206 1.00 45.73 O
ATOM 9 C3' A A 9 31.050 -4.998 -32.214 1.00 43.81 C
ATOM 10 O3' A A 9 30.706 -5.289 -30.869 1.00 47.27 O
ATOM 11 C2' A A 9 32.450 -4.421 -32.374 1.00 46.06 C
ATOM 12 O2' A A 9 33.374 -5.121 -31.557 1.00 48.05 O
ATOM 13 C1' A A 9 32.755 -4.755 -33.834 1.00 45.32 C
ATOM 14 N9 A A 9 32.474 -3.624 -34.736 1.00 45.55 N
ATOM 15 C8 A A 9 31.439 -3.481 -35.625 1.00 46.49 C
ATOM 16 N7 A A 9 31.472 -2.356 -36.295 1.00 44.22 N
ATOM 17 C5 A A 9 32.607 -1.717 -35.818 1.00 46.37 C
ATOM 18 C6 A A 9 33.198 -0.481 -36.128 1.00 47.24 C
ATOM 19 N6 A A 9 32.701 0.364 -37.033 1.00 49.51 N
ATOM 20 N1 A A 9 34.330 -0.142 -35.471 1.00 47.48 N
ATOM 21 C2 A A 9 34.824 -0.994 -34.565 1.00 44.97 C
ATOM 22 N3 A A 9 34.359 -2.183 -34.188 1.00 46.15 N
ATOM 23 C4 A A 9 33.236 -2.489 -34.861 1.00 46.24 C
ATOM 24 P C A 10 29.393 -4.638 -30.204 1.00 53.67 P
ATOM 25 OP1 C A 10 28.703 -3.860 -31.262 1.00 45.06 O
ATOM 26 OP2 C A 10 29.831 -3.934 -28.974 1.00 44.90 O
ATOM 27 O5' C A 10 28.523 -5.915 -29.817 1.00 50.93 O
TER
ATOM 1 O3' G B 57 32.209 3.767 -41.559 1.00 52.85 O
ATOM 2 P A B 58 33.039 2.485 -42.058 1.00 56.93 P
ATOM 3 OP1 A B 58 33.260 2.647 -43.515 1.00 55.85 O
ATOM 4 OP2 A B 58 32.316 1.282 -41.576 1.00 53.11 O
ATOM 5 O5' A B 58 34.418 2.637 -41.280 1.00 48.54 O
ATOM 6 C5' A B 58 35.466 1.698 -41.464 1.00 45.73 C
ATOM 7 C4' A B 58 36.326 1.586 -40.231 1.00 45.07 C
ATOM 8 O4' A B 58 35.518 1.152 -39.107 1.00 51.69 O
ATOM 9 C3' A B 58 37.453 0.566 -40.292 1.00 49.34 C
ATOM 10 O3' A B 58 38.601 1.051 -40.967 1.00 55.72 O
ATOM 11 C2' A B 58 37.697 0.252 -38.823 1.00 51.24 C
ATOM 12 O2' A B 58 38.463 1.280 -38.210 1.00 47.26 O
ATOM 13 C1' A B 58 36.277 0.311 -38.264 1.00 54.06 C
ATOM 14 N9 A B 58 35.639 -1.018 -38.231 1.00 50.83 N
ATOM 15 C8 A B 58 34.599 -1.476 -38.999 1.00 48.31 C
ATOM 16 N7 A B 58 34.249 -2.710 -38.730 1.00 46.61 N
ATOM 17 C5 A B 58 35.116 -3.087 -37.713 1.00 45.07 C
ATOM 18 C6 A B 58 35.263 -4.281 -36.985 1.00 45.14 C
ATOM 19 N6 A B 58 34.507 -5.365 -37.177 1.00 47.13 N
ATOM 20 N1 A B 58 36.225 -4.326 -36.037 1.00 47.77 N
ATOM 21 C2 A B 58 36.984 -3.240 -35.843 1.00 47.99 C
ATOM 22 N3 A B 58 36.941 -2.064 -36.462 1.00 46.29 N
ATOM 23 C4 A B 58 35.974 -2.053 -37.395 1.00 48.81 C
ATOM 24 P C B 59 39.382 0.112 -42.011 1.00 57.24 P
ATOM 25 OP1 C B 59 40.244 0.996 -42.833 1.00 58.67 O
ATOM 26 OP2 C B 59 38.363 -0.723 -42.691 1.00 50.51 O
ATOM 27 O5' C B 59 40.285 -0.798 -41.065 1.00 48.41 O
TER
ATOM 2 P A A 9 28.290 -5.873 -35.579 1.00 39.20 P
ATOM 3 OP1 A A 9 27.670 -4.593 -35.999 1.00 40.49 O
ATOM 4 OP2 A A 9 29.196 -6.567 -36.521 1.00 41.61 O
ATOM 5 O5' A A 9 29.014 -5.684 -34.176 1.00 40.54 O
ATOM 6 C5' A A 9 29.775 -6.735 -33.603 1.00 43.93 C
ATOM 7 C4' A A 9 31.100 -6.238 -33.092 1.00 41.34 C
ATOM 8 O4' A A 9 31.941 -5.846 -34.206 1.00 45.73 O
ATOM 9 C3' A A 9 31.050 -4.998 -32.214 1.00 43.81 C
ATOM 10 O3' A A 9 30.706 -5.289 -30.869 1.00 47.27 O
ATOM 11 C2' A A 9 32.450 -4.421 -32.374 1.00 46.06 C
ATOM 12 O2' A A 9 33.374 -5.121 -31.557 1.00 48.05 O
ATOM 13 C1' A A 9 32.755 -4.755 -33.834 1.00 45.32 C
ATOM 14 N9 A A 9 32.474 -3.624 -34.736 1.00 45.55 N
ATOM 15 C8 A A 9 31.439 -3.481 -35.625 1.00 46.49 C
ATOM 16 N7 A A 9 31.472 -2.356 -36.295 1.00 44.22 N
ATOM 17 C5 A A 9 32.607 -1.717 -35.818 1.00 46.37 C
ATOM 18 C6 A A 9 33.198 -0.481 -36.128 1.00 47.24 C
ATOM 19 N6 A A 9 32.701 0.364 -37.033 1.00 49.51 N
ATOM 20 N1 A A 9 34.330 -0.142 -35.471 1.00 47.48 N
ATOM 21 C2 A A 9 34.824 -0.994 -34.565 1.00 44.97 C
ATOM 22 N3 A A 9 34.359 -2.183 -34.188 1.00 46.15 N
ATOM 23 C4 A A 9 33.236 -2.489 -34.861 1.00 46.24 C
ATOM 24 P C A 10 29.393 -4.638 -30.204 1.00 53.67 P
ATOM 25 OP1 C A 10 28.703 -3.860 -31.262 1.00 45.06 O
ATOM 26 OP2 C A 10 29.831 -3.934 -28.974 1.00 44.90 O
ATOM 27 O5' C A 10 28.523 -5.915 -29.817 1.00 50.93 O
TER
ATOM 1 O3' G B 57 32.209 3.767 -41.559 1.00 52.85 O
ATOM 2 P A B 58 33.039 2.485 -42.058 1.00 56.93 P
ATOM 3 OP1 A B 58 33.260 2.647 -43.515 1.00 55.85 O
ATOM 4 OP2 A B 58 32.316 1.282 -41.576 1.00 53.11 O
ATOM 5 O5' A B 58 34.418 2.637 -41.280 1.00 48.54 O
ATOM 6 C5' A B 58 35.466 1.698 -41.464 1.00 45.73 C
ATOM 7 C4' A B 58 36.326 1.586 -40.231 1.00 45.07 C
ATOM 8 O4' A B 58 35.518 1.152 -39.107 1.00 51.69 O
ATOM 9 C3' A B 58 37.453 0.566 -40.292 1.00 49.34 C
ATOM 10 O3' A B 58 38.601 1.051 -40.967 1.00 55.72 O
ATOM 11 C2' A B 58 37.697 0.252 -38.823 1.00 51.24 C
ATOM 12 O2' A B 58 38.463 1.280 -38.210 1.00 47.26 O
ATOM 13 C1' A B 58 36.277 0.311 -38.264 1.00 54.06 C
ATOM 14 N9 A B 58 35.639 -1.018 -38.231 1.00 50.83 N
ATOM 15 C8 A B 58 34.599 -1.476 -38.999 1.00 48.31 C
ATOM 16 N7 A B 58 34.249 -2.710 -38.730 1.00 46.61 N
ATOM 17 C5 A B 58 35.116 -3.087 -37.713 1.00 45.07 C
ATOM 18 C6 A B 58 35.263 -4.281 -36.985 1.00 45.14 C
ATOM 19 N6 A B 58 34.507 -5.365 -37.177 1.00 47.13 N
ATOM 20 N1 A B 58 36.225 -4.326 -36.037 1.00 47.77 N
ATOM 21 C2 A B 58 36.984 -3.240 -35.843 1.00 47.99 C
ATOM 22 N3 A B 58 36.941 -2.064 -36.462 1.00 46.29 N
ATOM 23 C4 A B 58 35.974 -2.053 -37.395 1.00 48.81 C
ATOM 24 P C B 59 39.382 0.112 -42.011 1.00 57.24 P
ATOM 25 OP1 C B 59 40.244 0.996 -42.833 1.00 58.67 O
ATOM 26 OP2 C B 59 38.363 -0.723 -42.691 1.00 50.51 O
ATOM 27 O5' C B 59 40.285 -0.798 -41.065 1.00 48.41 O
TER
Atoms:
OP1: (27.670,-4.593,-35.999)
OP2: (29.196,-6.567,-36.521)
C3': (31.050,-4.998,-32.214)
C1': (32.755,-4.755,-33.834)
C5': (29.775,-6.735,-33.603)
O4': (31.941,-5.846,-34.206)
C8: (31.439,-3.481,-35.625)
O2': (33.374,-5.121,-31.557)
C6: (33.198,-0.481,-36.128)
C5: (32.607,-1.717,-35.818)
C4: (33.236,-2.489,-34.861)
P: (28.290,-5.873,-35.579)
C4': (31.100,-6.238,-33.092)
C2': (32.450,-4.421,-32.374)
C2: (34.824,-0.994,-34.565)
N1: (34.330,-0.142,-35.471)
N3: (34.359,-2.183,-34.188)
N6: (32.701,0.364,-37.033)
N7: (31.472,-2.356,-36.295)
N9: (32.474,-3.624,-34.736)
O5': (29.014,-5.684,-34.176)
O3': (30.706,-5.289,-30.869)
OP2: (29.196,-6.567,-36.521)
C3': (31.050,-4.998,-32.214)
C1': (32.755,-4.755,-33.834)
C5': (29.775,-6.735,-33.603)
O4': (31.941,-5.846,-34.206)
C8: (31.439,-3.481,-35.625)
O2': (33.374,-5.121,-31.557)
C6: (33.198,-0.481,-36.128)
C5: (32.607,-1.717,-35.818)
C4: (33.236,-2.489,-34.861)
P: (28.290,-5.873,-35.579)
C4': (31.100,-6.238,-33.092)
C2': (32.450,-4.421,-32.374)
C2: (34.824,-0.994,-34.565)
N1: (34.330,-0.142,-35.471)
N3: (34.359,-2.183,-34.188)
N6: (32.701,0.364,-37.033)
N7: (31.472,-2.356,-36.295)
N9: (32.474,-3.624,-34.736)
O5': (29.014,-5.684,-34.176)
O3': (30.706,-5.289,-30.869)
OP1: (33.260,2.647,-43.515)
OP2: (32.316,1.282,-41.576)
C3': (37.453,0.566,-40.292)
C1': (36.277,0.311,-38.264)
C5': (35.466,1.698,-41.464)
O4': (35.518,1.152,-39.107)
C8: (34.599,-1.476,-38.999)
O2': (38.463,1.280,-38.210)
C6: (35.263,-4.281,-36.985)
C5: (35.116,-3.087,-37.713)
C4: (35.974,-2.053,-37.395)
P: (33.039,2.485,-42.058)
C4': (36.326,1.586,-40.231)
C2': (37.697,0.252,-38.823)
C2: (36.984,-3.240,-35.843)
N1: (36.225,-4.326,-36.037)
N3: (36.941,-2.064,-36.462)
N6: (34.507,-5.365,-37.177)
N7: (34.249,-2.710,-38.730)
N9: (35.639,-1.018,-38.231)
O5': (34.418,2.637,-41.280)
O3': (38.601,1.051,-40.967)
OP2: (32.316,1.282,-41.576)
C3': (37.453,0.566,-40.292)
C1': (36.277,0.311,-38.264)
C5': (35.466,1.698,-41.464)
O4': (35.518,1.152,-39.107)
C8: (34.599,-1.476,-38.999)
O2': (38.463,1.280,-38.210)
C6: (35.263,-4.281,-36.985)
C5: (35.116,-3.087,-37.713)
C4: (35.974,-2.053,-37.395)
P: (33.039,2.485,-42.058)
C4': (36.326,1.586,-40.231)
C2': (37.697,0.252,-38.823)
C2: (36.984,-3.240,-35.843)
N1: (36.225,-4.326,-36.037)
N3: (36.941,-2.064,-36.462)
N6: (34.507,-5.365,-37.177)
N7: (34.249,-2.710,-38.730)
N9: (35.639,-1.018,-38.231)
O5': (34.418,2.637,-41.280)
O3': (38.601,1.051,-40.967)
Image (generated by PyMOL):