Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:038:0103
Extra
PDB:
ATOM 1 O3' G A 37 69.083 146.834 28.799 1.00 39.62 O
ATOM 2 P A A 38 67.706 147.411 29.392 1.00 39.76 P
ATOM 3 OP1 A A 38 67.075 148.252 28.350 1.00 39.78 O
ATOM 4 OP2 A A 38 67.982 147.995 30.726 1.00 40.06 O
ATOM 5 O5' A A 38 66.815 146.105 29.587 1.00 39.66 O
ATOM 6 C5' A A 38 66.308 145.373 28.455 1.00 39.19 C
ATOM 7 C4' A A 38 66.142 143.915 28.810 1.00 40.04 C
ATOM 8 O4' A A 38 67.442 143.293 28.937 1.00 41.72 O
ATOM 9 C3' A A 38 65.454 143.665 30.140 1.00 40.94 C
ATOM 10 O3' A A 38 64.049 143.665 29.978 1.00 37.86 O
ATOM 11 C2' A A 38 65.992 142.302 30.551 1.00 42.56 C
ATOM 12 O2' A A 38 65.323 141.238 29.911 1.00 45.70 O
ATOM 13 C1' A A 38 67.420 142.363 30.007 1.00 42.41 C
ATOM 14 N9 A A 38 68.457 142.747 30.964 1.00 41.83 N
ATOM 15 C8 A A 38 69.137 143.935 31.023 1.00 41.14 C
ATOM 16 N7 A A 38 70.099 143.949 31.910 1.00 43.04 N
ATOM 17 C5 A A 38 70.035 142.693 32.494 1.00 42.23 C
ATOM 18 C6 A A 38 70.813 142.067 33.486 1.00 42.13 C
ATOM 19 N6 A A 38 71.872 142.639 34.076 1.00 39.87 N
ATOM 20 N1 A A 38 70.473 140.810 33.846 1.00 39.92 N
ATOM 21 C2 A A 38 69.436 140.230 33.243 1.00 41.37 C
ATOM 22 N3 A A 38 68.640 140.707 32.289 1.00 42.84 N
ATOM 23 C4 A A 38 69.001 141.956 31.950 1.00 43.04 C
ATOM 24 P A A 39 63.130 144.403 31.057 1.00 41.01 P
ATOM 25 OP1 A A 39 61.730 144.397 30.538 1.00 40.69 O
ATOM 26 OP2 A A 39 63.770 145.687 31.432 1.00 40.68 O
ATOM 27 O5' A A 39 63.224 143.445 32.324 1.00 41.62 O
TER
ATOM 1 O3' G B 102 74.514 145.252 38.288 1.00 30.41 O
ATOM 2 P A B 103 75.928 144.724 37.769 1.00 33.90 P
ATOM 3 OP1 A B 103 76.479 143.836 38.823 1.00 32.34 O
ATOM 4 OP2 A B 103 76.714 145.896 37.314 1.00 33.71 O
ATOM 5 O5' A B 103 75.564 143.835 36.497 1.00 34.13 O
ATOM 6 C5' A B 103 75.136 142.476 36.660 1.00 34.64 C
ATOM 7 C4' A B 103 75.639 141.615 35.527 1.00 34.10 C
ATOM 8 O4' A B 103 74.770 141.716 34.372 1.00 35.70 O
ATOM 9 C3' A B 103 76.981 141.994 34.942 1.00 33.80 C
ATOM 10 O3' A B 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 11 C2' A B 103 76.976 141.226 33.622 1.00 33.48 C
ATOM 12 O2' A B 103 77.365 139.881 33.790 1.00 30.77 O
ATOM 13 C1' A B 103 75.492 141.291 33.226 1.00 35.52 C
ATOM 14 N9 A B 103 75.155 142.171 32.100 1.00 38.33 N
ATOM 15 C8 A B 103 75.804 143.304 31.674 1.00 38.64 C
ATOM 16 N7 A B 103 75.252 143.868 30.627 1.00 39.41 N
ATOM 17 C5 A B 103 74.165 143.055 30.342 1.00 40.16 C
ATOM 18 C6 A B 103 73.174 143.108 29.341 1.00 41.11 C
ATOM 19 N6 A B 103 73.111 144.055 28.399 1.00 40.72 N
ATOM 20 N1 A B 103 72.234 142.140 29.340 1.00 40.25 N
ATOM 21 C2 A B 103 72.290 141.197 30.274 1.00 37.63 C
ATOM 22 N3 A B 103 73.164 141.037 31.259 1.00 39.60 N
ATOM 23 C4 A B 103 74.090 142.009 31.240 1.00 39.31 C
ATOM 24 P A B 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 25 OP1 A B 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 26 OP2 A B 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 27 O5' A B 104 79.291 143.506 34.656 1.00 33.06 O
TER
ATOM 2 P A A 38 67.706 147.411 29.392 1.00 39.76 P
ATOM 3 OP1 A A 38 67.075 148.252 28.350 1.00 39.78 O
ATOM 4 OP2 A A 38 67.982 147.995 30.726 1.00 40.06 O
ATOM 5 O5' A A 38 66.815 146.105 29.587 1.00 39.66 O
ATOM 6 C5' A A 38 66.308 145.373 28.455 1.00 39.19 C
ATOM 7 C4' A A 38 66.142 143.915 28.810 1.00 40.04 C
ATOM 8 O4' A A 38 67.442 143.293 28.937 1.00 41.72 O
ATOM 9 C3' A A 38 65.454 143.665 30.140 1.00 40.94 C
ATOM 10 O3' A A 38 64.049 143.665 29.978 1.00 37.86 O
ATOM 11 C2' A A 38 65.992 142.302 30.551 1.00 42.56 C
ATOM 12 O2' A A 38 65.323 141.238 29.911 1.00 45.70 O
ATOM 13 C1' A A 38 67.420 142.363 30.007 1.00 42.41 C
ATOM 14 N9 A A 38 68.457 142.747 30.964 1.00 41.83 N
ATOM 15 C8 A A 38 69.137 143.935 31.023 1.00 41.14 C
ATOM 16 N7 A A 38 70.099 143.949 31.910 1.00 43.04 N
ATOM 17 C5 A A 38 70.035 142.693 32.494 1.00 42.23 C
ATOM 18 C6 A A 38 70.813 142.067 33.486 1.00 42.13 C
ATOM 19 N6 A A 38 71.872 142.639 34.076 1.00 39.87 N
ATOM 20 N1 A A 38 70.473 140.810 33.846 1.00 39.92 N
ATOM 21 C2 A A 38 69.436 140.230 33.243 1.00 41.37 C
ATOM 22 N3 A A 38 68.640 140.707 32.289 1.00 42.84 N
ATOM 23 C4 A A 38 69.001 141.956 31.950 1.00 43.04 C
ATOM 24 P A A 39 63.130 144.403 31.057 1.00 41.01 P
ATOM 25 OP1 A A 39 61.730 144.397 30.538 1.00 40.69 O
ATOM 26 OP2 A A 39 63.770 145.687 31.432 1.00 40.68 O
ATOM 27 O5' A A 39 63.224 143.445 32.324 1.00 41.62 O
TER
ATOM 1 O3' G B 102 74.514 145.252 38.288 1.00 30.41 O
ATOM 2 P A B 103 75.928 144.724 37.769 1.00 33.90 P
ATOM 3 OP1 A B 103 76.479 143.836 38.823 1.00 32.34 O
ATOM 4 OP2 A B 103 76.714 145.896 37.314 1.00 33.71 O
ATOM 5 O5' A B 103 75.564 143.835 36.497 1.00 34.13 O
ATOM 6 C5' A B 103 75.136 142.476 36.660 1.00 34.64 C
ATOM 7 C4' A B 103 75.639 141.615 35.527 1.00 34.10 C
ATOM 8 O4' A B 103 74.770 141.716 34.372 1.00 35.70 O
ATOM 9 C3' A B 103 76.981 141.994 34.942 1.00 33.80 C
ATOM 10 O3' A B 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 11 C2' A B 103 76.976 141.226 33.622 1.00 33.48 C
ATOM 12 O2' A B 103 77.365 139.881 33.790 1.00 30.77 O
ATOM 13 C1' A B 103 75.492 141.291 33.226 1.00 35.52 C
ATOM 14 N9 A B 103 75.155 142.171 32.100 1.00 38.33 N
ATOM 15 C8 A B 103 75.804 143.304 31.674 1.00 38.64 C
ATOM 16 N7 A B 103 75.252 143.868 30.627 1.00 39.41 N
ATOM 17 C5 A B 103 74.165 143.055 30.342 1.00 40.16 C
ATOM 18 C6 A B 103 73.174 143.108 29.341 1.00 41.11 C
ATOM 19 N6 A B 103 73.111 144.055 28.399 1.00 40.72 N
ATOM 20 N1 A B 103 72.234 142.140 29.340 1.00 40.25 N
ATOM 21 C2 A B 103 72.290 141.197 30.274 1.00 37.63 C
ATOM 22 N3 A B 103 73.164 141.037 31.259 1.00 39.60 N
ATOM 23 C4 A B 103 74.090 142.009 31.240 1.00 39.31 C
ATOM 24 P A B 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 25 OP1 A B 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 26 OP2 A B 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 27 O5' A B 104 79.291 143.506 34.656 1.00 33.06 O
TER
Atoms:
OP1: (67.075,148.252,28.350)
OP2: (67.982,147.995,30.726)
C3': (65.454,143.665,30.140)
C1': (67.420,142.363,30.007)
C5': (66.308,145.373,28.455)
O4': (67.442,143.293,28.937)
C8: (69.137,143.935,31.023)
O2': (65.323,141.238,29.911)
C6: (70.813,142.067,33.486)
C5: (70.035,142.693,32.494)
C4: (69.001,141.956,31.950)
P: (67.706,147.411,29.392)
C4': (66.142,143.915,28.810)
C2': (65.992,142.302,30.551)
C2: (69.436,140.230,33.243)
N1: (70.473,140.810,33.846)
N3: (68.640,140.707,32.289)
N6: (71.872,142.639,34.076)
N7: (70.099,143.949,31.910)
N9: (68.457,142.747,30.964)
O5': (66.815,146.105,29.587)
O3': (64.049,143.665,29.978)
OP2: (67.982,147.995,30.726)
C3': (65.454,143.665,30.140)
C1': (67.420,142.363,30.007)
C5': (66.308,145.373,28.455)
O4': (67.442,143.293,28.937)
C8: (69.137,143.935,31.023)
O2': (65.323,141.238,29.911)
C6: (70.813,142.067,33.486)
C5: (70.035,142.693,32.494)
C4: (69.001,141.956,31.950)
P: (67.706,147.411,29.392)
C4': (66.142,143.915,28.810)
C2': (65.992,142.302,30.551)
C2: (69.436,140.230,33.243)
N1: (70.473,140.810,33.846)
N3: (68.640,140.707,32.289)
N6: (71.872,142.639,34.076)
N7: (70.099,143.949,31.910)
N9: (68.457,142.747,30.964)
O5': (66.815,146.105,29.587)
O3': (64.049,143.665,29.978)
OP1: (76.479,143.836,38.823)
OP2: (76.714,145.896,37.314)
C3': (76.981,141.994,34.942)
C1': (75.492,141.291,33.226)
C5': (75.136,142.476,36.660)
O4': (74.770,141.716,34.372)
C8: (75.804,143.304,31.674)
O2': (77.365,139.881,33.790)
C6: (73.174,143.108,29.341)
C5: (74.165,143.055,30.342)
C4: (74.090,142.009,31.240)
P: (75.928,144.724,37.769)
C4': (75.639,141.615,35.527)
C2': (76.976,141.226,33.622)
C2: (72.290,141.197,30.274)
N1: (72.234,142.140,29.340)
N3: (73.164,141.037,31.259)
N6: (73.111,144.055,28.399)
N7: (75.252,143.868,30.627)
N9: (75.155,142.171,32.100)
O5': (75.564,143.835,36.497)
O3': (78.060,141.622,35.784)
OP2: (76.714,145.896,37.314)
C3': (76.981,141.994,34.942)
C1': (75.492,141.291,33.226)
C5': (75.136,142.476,36.660)
O4': (74.770,141.716,34.372)
C8: (75.804,143.304,31.674)
O2': (77.365,139.881,33.790)
C6: (73.174,143.108,29.341)
C5: (74.165,143.055,30.342)
C4: (74.090,142.009,31.240)
P: (75.928,144.724,37.769)
C4': (75.639,141.615,35.527)
C2': (76.976,141.226,33.622)
C2: (72.290,141.197,30.274)
N1: (72.234,142.140,29.340)
N3: (73.164,141.037,31.259)
N6: (73.111,144.055,28.399)
N7: (75.252,143.868,30.627)
N9: (75.155,142.171,32.100)
O5': (75.564,143.835,36.497)
O3': (78.060,141.622,35.784)
Image (generated by PyMOL):