Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A685:A702
Extra
PDB:
ATOM 1 O3' U A 684 -86.237 19.735 48.446 1.00 17.94 O
ATOM 2 P A A 685 -87.756 19.535 48.898 1.00 3.07 P
ATOM 3 OP1 A A 685 -88.287 20.876 49.282 1.00 3.07 O
ATOM 4 OP2 A A 685 -87.763 18.447 49.909 1.00 3.07 O
ATOM 5 O5' A A 685 -88.434 19.054 47.532 1.00 3.07 O
ATOM 6 C5' A A 685 -88.640 19.973 46.469 1.00 3.07 C
ATOM 7 C4' A A 685 -88.523 19.324 45.107 1.00 3.07 C
ATOM 8 O4' A A 685 -87.146 18.935 44.860 1.00 3.07 O
ATOM 9 C3' A A 685 -89.361 18.060 44.877 1.00 3.07 C
ATOM 10 O3' A A 685 -89.835 18.066 43.544 1.00 3.07 O
ATOM 11 C2' A A 685 -88.347 16.936 45.004 1.00 3.07 C
ATOM 12 O2' A A 685 -88.714 15.764 44.311 1.00 3.07 O
ATOM 13 C1' A A 685 -87.126 17.596 44.381 1.00 3.07 C
ATOM 14 N9 A A 685 -85.844 16.978 44.734 1.00 2.67 N
ATOM 15 C8 A A 685 -85.374 16.624 45.965 1.00 2.67 C
ATOM 16 N7 A A 685 -84.169 16.106 45.905 1.00 2.67 N
ATOM 17 C5 A A 685 -83.825 16.131 44.565 1.00 2.67 C
ATOM 18 C6 A A 685 -82.686 15.725 43.867 1.00 2.67 C
ATOM 19 N6 A A 685 -81.615 15.173 44.428 1.00 2.67 N
ATOM 20 N1 A A 685 -82.660 15.905 42.549 1.00 2.67 N
ATOM 21 C2 A A 685 -83.728 16.443 41.975 1.00 2.67 C
ATOM 22 N3 A A 685 -84.858 16.853 42.527 1.00 2.67 N
ATOM 23 C4 A A 685 -84.847 16.664 43.842 1.00 2.67 C
ATOM 24 P G A 686 -91.056 18.988 43.157 1.00 19.74 P
ATOM 25 OP1 G A 686 -91.693 19.420 44.432 1.00 19.74 O
ATOM 26 OP2 G A 686 -91.860 18.235 42.165 1.00 19.74 O
ATOM 27 O5' G A 686 -90.361 20.224 42.457 1.00 19.74 O
TER
ATOM 1 O3' G B 701 -77.204 15.642 43.967 1.00 14.29 O
ATOM 2 P A B 702 -76.059 16.657 43.512 1.00 10.65 P
ATOM 3 OP1 A B 702 -74.755 15.922 43.606 1.00 10.65 O
ATOM 4 OP2 A B 702 -76.231 17.904 44.298 1.00 10.65 O
ATOM 5 O5' A B 702 -76.426 16.896 41.989 1.00 10.65 O
ATOM 6 C5' A B 702 -76.337 15.826 41.066 1.00 10.65 C
ATOM 7 C4' A B 702 -77.380 15.941 40.006 1.00 10.65 C
ATOM 8 O4' A B 702 -78.673 15.650 40.577 1.00 10.65 O
ATOM 9 C3' A B 702 -77.528 17.321 39.414 1.00 10.65 C
ATOM 10 O3' A B 702 -76.582 17.583 38.399 1.00 10.65 O
ATOM 11 C2' A B 702 -78.982 17.348 38.948 1.00 10.65 C
ATOM 12 O2' A B 702 -79.134 16.763 37.660 1.00 10.65 O
ATOM 13 C1' A B 702 -79.662 16.450 39.978 1.00 10.65 C
ATOM 14 N9 A B 702 -80.323 17.223 41.027 1.00 10.72 N
ATOM 15 C8 A B 702 -80.050 17.217 42.361 1.00 10.72 C
ATOM 16 N7 A B 702 -80.817 18.031 43.043 1.00 10.72 N
ATOM 17 C5 A B 702 -81.662 18.597 42.088 1.00 10.72 C
ATOM 18 C6 A B 702 -82.721 19.553 42.152 1.00 10.72 C
ATOM 19 N6 A B 702 -83.154 20.165 43.276 1.00 10.72 N
ATOM 20 N1 A B 702 -83.335 19.879 40.987 1.00 10.72 N
ATOM 21 C2 A B 702 -82.912 19.290 39.864 1.00 10.72 C
ATOM 22 N3 A B 702 -81.941 18.395 39.670 1.00 10.72 N
ATOM 23 C4 A B 702 -81.357 18.088 40.838 1.00 10.72 C
ATOM 24 P G B 703 -75.816 18.989 38.373 1.00 7.42 P
ATOM 25 OP1 G B 703 -74.948 19.005 37.173 1.00 7.42 O
ATOM 26 OP2 G B 703 -75.194 19.161 39.688 1.00 7.42 O
ATOM 27 O5' G B 703 -77.009 20.029 38.201 1.00 7.42 O
TER
ATOM 2 P A A 685 -87.756 19.535 48.898 1.00 3.07 P
ATOM 3 OP1 A A 685 -88.287 20.876 49.282 1.00 3.07 O
ATOM 4 OP2 A A 685 -87.763 18.447 49.909 1.00 3.07 O
ATOM 5 O5' A A 685 -88.434 19.054 47.532 1.00 3.07 O
ATOM 6 C5' A A 685 -88.640 19.973 46.469 1.00 3.07 C
ATOM 7 C4' A A 685 -88.523 19.324 45.107 1.00 3.07 C
ATOM 8 O4' A A 685 -87.146 18.935 44.860 1.00 3.07 O
ATOM 9 C3' A A 685 -89.361 18.060 44.877 1.00 3.07 C
ATOM 10 O3' A A 685 -89.835 18.066 43.544 1.00 3.07 O
ATOM 11 C2' A A 685 -88.347 16.936 45.004 1.00 3.07 C
ATOM 12 O2' A A 685 -88.714 15.764 44.311 1.00 3.07 O
ATOM 13 C1' A A 685 -87.126 17.596 44.381 1.00 3.07 C
ATOM 14 N9 A A 685 -85.844 16.978 44.734 1.00 2.67 N
ATOM 15 C8 A A 685 -85.374 16.624 45.965 1.00 2.67 C
ATOM 16 N7 A A 685 -84.169 16.106 45.905 1.00 2.67 N
ATOM 17 C5 A A 685 -83.825 16.131 44.565 1.00 2.67 C
ATOM 18 C6 A A 685 -82.686 15.725 43.867 1.00 2.67 C
ATOM 19 N6 A A 685 -81.615 15.173 44.428 1.00 2.67 N
ATOM 20 N1 A A 685 -82.660 15.905 42.549 1.00 2.67 N
ATOM 21 C2 A A 685 -83.728 16.443 41.975 1.00 2.67 C
ATOM 22 N3 A A 685 -84.858 16.853 42.527 1.00 2.67 N
ATOM 23 C4 A A 685 -84.847 16.664 43.842 1.00 2.67 C
ATOM 24 P G A 686 -91.056 18.988 43.157 1.00 19.74 P
ATOM 25 OP1 G A 686 -91.693 19.420 44.432 1.00 19.74 O
ATOM 26 OP2 G A 686 -91.860 18.235 42.165 1.00 19.74 O
ATOM 27 O5' G A 686 -90.361 20.224 42.457 1.00 19.74 O
TER
ATOM 1 O3' G B 701 -77.204 15.642 43.967 1.00 14.29 O
ATOM 2 P A B 702 -76.059 16.657 43.512 1.00 10.65 P
ATOM 3 OP1 A B 702 -74.755 15.922 43.606 1.00 10.65 O
ATOM 4 OP2 A B 702 -76.231 17.904 44.298 1.00 10.65 O
ATOM 5 O5' A B 702 -76.426 16.896 41.989 1.00 10.65 O
ATOM 6 C5' A B 702 -76.337 15.826 41.066 1.00 10.65 C
ATOM 7 C4' A B 702 -77.380 15.941 40.006 1.00 10.65 C
ATOM 8 O4' A B 702 -78.673 15.650 40.577 1.00 10.65 O
ATOM 9 C3' A B 702 -77.528 17.321 39.414 1.00 10.65 C
ATOM 10 O3' A B 702 -76.582 17.583 38.399 1.00 10.65 O
ATOM 11 C2' A B 702 -78.982 17.348 38.948 1.00 10.65 C
ATOM 12 O2' A B 702 -79.134 16.763 37.660 1.00 10.65 O
ATOM 13 C1' A B 702 -79.662 16.450 39.978 1.00 10.65 C
ATOM 14 N9 A B 702 -80.323 17.223 41.027 1.00 10.72 N
ATOM 15 C8 A B 702 -80.050 17.217 42.361 1.00 10.72 C
ATOM 16 N7 A B 702 -80.817 18.031 43.043 1.00 10.72 N
ATOM 17 C5 A B 702 -81.662 18.597 42.088 1.00 10.72 C
ATOM 18 C6 A B 702 -82.721 19.553 42.152 1.00 10.72 C
ATOM 19 N6 A B 702 -83.154 20.165 43.276 1.00 10.72 N
ATOM 20 N1 A B 702 -83.335 19.879 40.987 1.00 10.72 N
ATOM 21 C2 A B 702 -82.912 19.290 39.864 1.00 10.72 C
ATOM 22 N3 A B 702 -81.941 18.395 39.670 1.00 10.72 N
ATOM 23 C4 A B 702 -81.357 18.088 40.838 1.00 10.72 C
ATOM 24 P G B 703 -75.816 18.989 38.373 1.00 7.42 P
ATOM 25 OP1 G B 703 -74.948 19.005 37.173 1.00 7.42 O
ATOM 26 OP2 G B 703 -75.194 19.161 39.688 1.00 7.42 O
ATOM 27 O5' G B 703 -77.009 20.029 38.201 1.00 7.42 O
TER
Atoms:
OP1: (-88.287,20.876,49.282)
OP2: (-87.763,18.447,49.909)
C3': (-89.361,18.060,44.877)
C1': (-87.126,17.596,44.381)
C5': (-88.640,19.973,46.469)
O4': (-87.146,18.935,44.860)
C8: (-85.374,16.624,45.965)
O2': (-88.714,15.764,44.311)
C6: (-82.686,15.725,43.867)
C5: (-83.825,16.131,44.565)
C4: (-84.847,16.664,43.842)
P: (-87.756,19.535,48.898)
C4': (-88.523,19.324,45.107)
C2': (-88.347,16.936,45.004)
C2: (-83.728,16.443,41.975)
N1: (-82.660,15.905,42.549)
N3: (-84.858,16.853,42.527)
N6: (-81.615,15.173,44.428)
N7: (-84.169,16.106,45.905)
N9: (-85.844,16.978,44.734)
O5': (-88.434,19.054,47.532)
O3': (-89.835,18.066,43.544)
OP2: (-87.763,18.447,49.909)
C3': (-89.361,18.060,44.877)
C1': (-87.126,17.596,44.381)
C5': (-88.640,19.973,46.469)
O4': (-87.146,18.935,44.860)
C8: (-85.374,16.624,45.965)
O2': (-88.714,15.764,44.311)
C6: (-82.686,15.725,43.867)
C5: (-83.825,16.131,44.565)
C4: (-84.847,16.664,43.842)
P: (-87.756,19.535,48.898)
C4': (-88.523,19.324,45.107)
C2': (-88.347,16.936,45.004)
C2: (-83.728,16.443,41.975)
N1: (-82.660,15.905,42.549)
N3: (-84.858,16.853,42.527)
N6: (-81.615,15.173,44.428)
N7: (-84.169,16.106,45.905)
N9: (-85.844,16.978,44.734)
O5': (-88.434,19.054,47.532)
O3': (-89.835,18.066,43.544)
OP1: (-74.755,15.922,43.606)
OP2: (-76.231,17.904,44.298)
C3': (-77.528,17.321,39.414)
C1': (-79.662,16.450,39.978)
C5': (-76.337,15.826,41.066)
O4': (-78.673,15.650,40.577)
C8: (-80.050,17.217,42.361)
O2': (-79.134,16.763,37.660)
C6: (-82.721,19.553,42.152)
C5: (-81.662,18.597,42.088)
C4: (-81.357,18.088,40.838)
P: (-76.059,16.657,43.512)
C4': (-77.380,15.941,40.006)
C2': (-78.982,17.348,38.948)
C2: (-82.912,19.290,39.864)
N1: (-83.335,19.879,40.987)
N3: (-81.941,18.395,39.670)
N6: (-83.154,20.165,43.276)
N7: (-80.817,18.031,43.043)
N9: (-80.323,17.223,41.027)
O5': (-76.426,16.896,41.989)
O3': (-76.582,17.583,38.399)
OP2: (-76.231,17.904,44.298)
C3': (-77.528,17.321,39.414)
C1': (-79.662,16.450,39.978)
C5': (-76.337,15.826,41.066)
O4': (-78.673,15.650,40.577)
C8: (-80.050,17.217,42.361)
O2': (-79.134,16.763,37.660)
C6: (-82.721,19.553,42.152)
C5: (-81.662,18.597,42.088)
C4: (-81.357,18.088,40.838)
P: (-76.059,16.657,43.512)
C4': (-77.380,15.941,40.006)
C2': (-78.982,17.348,38.948)
C2: (-82.912,19.290,39.864)
N1: (-83.335,19.879,40.987)
N3: (-81.941,18.395,39.670)
N6: (-83.154,20.165,43.276)
N7: (-80.817,18.031,43.043)
N9: (-80.323,17.223,41.027)
O5': (-76.426,16.896,41.989)
O3': (-76.582,17.583,38.399)
Image (generated by PyMOL):