Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02090:02104
Extra
PDB:
ATOM 1 O3' C A2089 118.954 116.147 29.420 1.00 50.36 O
ATOM 2 P A A2090 118.485 117.502 30.128 1.00 50.65 P
ATOM 3 OP1 A A2090 118.551 118.581 29.107 1.00 49.49 O
ATOM 4 OP2 A A2090 119.245 117.643 31.393 1.00 47.87 O
ATOM 5 O5' A A2090 116.948 117.228 30.454 1.00 49.13 O
ATOM 6 C5' A A2090 116.003 116.966 29.390 1.00 47.52 C
ATOM 7 C4' A A2090 115.020 115.898 29.810 1.00 46.84 C
ATOM 8 O4' A A2090 115.738 114.679 30.137 1.00 46.99 O
ATOM 9 C3' A A2090 114.223 116.217 31.061 1.00 45.54 C
ATOM 10 O3' A A2090 113.087 117.013 30.744 1.00 43.70 O
ATOM 11 C2' A A2090 113.859 114.831 31.575 1.00 45.57 C
ATOM 12 O2' A A2090 112.803 114.231 30.857 1.00 46.74 O
ATOM 13 C1' A A2090 115.137 114.054 31.260 1.00 46.66 C
ATOM 14 N9 A A2090 116.115 114.042 32.353 1.00 47.58 N
ATOM 15 C8 A A2090 117.424 114.449 32.295 1.00 46.70 C
ATOM 16 N7 A A2090 118.078 114.287 33.417 1.00 47.93 N
ATOM 17 C5 A A2090 117.138 113.744 34.278 1.00 47.70 C
ATOM 18 C6 A A2090 117.215 113.327 35.617 1.00 47.79 C
ATOM 19 N6 A A2090 118.331 113.374 36.342 1.00 46.49 N
ATOM 20 N1 A A2090 116.092 112.845 36.191 1.00 48.22 N
ATOM 21 C2 A A2090 114.977 112.779 35.456 1.00 48.95 C
ATOM 22 N3 A A2090 114.783 113.123 34.184 1.00 50.01 N
ATOM 23 C4 A A2090 115.918 113.604 33.643 1.00 48.54 C
ATOM 24 P C A2091 112.899 118.441 31.447 1.00 43.83 P
ATOM 25 OP1 C A2091 111.584 118.992 31.031 1.00 42.46 O
ATOM 26 OP2 C A2091 114.128 119.235 31.202 1.00 46.56 O
ATOM 27 O5' C A2091 112.863 118.096 33.002 1.00 42.39 O
TER
ATOM 1 O3' G B2103 121.249 110.573 40.889 1.00 58.62 O
ATOM 2 P A B2104 122.040 109.221 40.538 1.00 59.29 P
ATOM 3 OP1 A B2104 121.620 108.192 41.527 1.00 58.19 O
ATOM 4 OP2 A B2104 123.486 109.544 40.382 1.00 61.41 O
ATOM 5 O5' A B2104 121.478 108.822 39.102 1.00 58.23 O
ATOM 6 C5' A B2104 120.574 107.715 38.939 1.00 57.03 C
ATOM 7 C4' A B2104 119.143 108.206 38.916 1.00 55.21 C
ATOM 8 O4' A B2104 119.030 109.349 38.025 1.00 54.09 O
ATOM 9 C3' A B2104 118.128 107.190 38.415 1.00 54.61 C
ATOM 10 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 11 C2' A B2104 118.084 107.523 36.930 1.00 53.42 C
ATOM 12 O2' A B2104 116.922 107.064 36.284 1.00 55.10 O
ATOM 13 C1' A B2104 118.127 109.049 36.984 1.00 52.81 C
ATOM 14 N9 A B2104 118.597 109.691 35.759 1.00 53.34 N
ATOM 15 C8 A B2104 119.877 110.054 35.431 1.00 53.05 C
ATOM 16 N7 A B2104 119.987 110.579 34.237 1.00 54.33 N
ATOM 17 C5 A B2104 118.691 110.571 33.748 1.00 53.67 C
ATOM 18 C6 A B2104 118.142 110.983 32.525 1.00 53.33 C
ATOM 19 N6 A B2104 118.863 111.488 31.525 1.00 52.72 N
ATOM 20 N1 A B2104 116.809 110.847 32.358 1.00 53.95 N
ATOM 21 C2 A B2104 116.090 110.323 33.355 1.00 53.64 C
ATOM 22 N3 A B2104 116.492 109.889 34.545 1.00 53.45 N
ATOM 23 C4 A B2104 117.821 110.041 34.680 1.00 53.93 C
ATOM 24 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 25 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 26 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 27 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
TER
ATOM 2 P A A2090 118.485 117.502 30.128 1.00 50.65 P
ATOM 3 OP1 A A2090 118.551 118.581 29.107 1.00 49.49 O
ATOM 4 OP2 A A2090 119.245 117.643 31.393 1.00 47.87 O
ATOM 5 O5' A A2090 116.948 117.228 30.454 1.00 49.13 O
ATOM 6 C5' A A2090 116.003 116.966 29.390 1.00 47.52 C
ATOM 7 C4' A A2090 115.020 115.898 29.810 1.00 46.84 C
ATOM 8 O4' A A2090 115.738 114.679 30.137 1.00 46.99 O
ATOM 9 C3' A A2090 114.223 116.217 31.061 1.00 45.54 C
ATOM 10 O3' A A2090 113.087 117.013 30.744 1.00 43.70 O
ATOM 11 C2' A A2090 113.859 114.831 31.575 1.00 45.57 C
ATOM 12 O2' A A2090 112.803 114.231 30.857 1.00 46.74 O
ATOM 13 C1' A A2090 115.137 114.054 31.260 1.00 46.66 C
ATOM 14 N9 A A2090 116.115 114.042 32.353 1.00 47.58 N
ATOM 15 C8 A A2090 117.424 114.449 32.295 1.00 46.70 C
ATOM 16 N7 A A2090 118.078 114.287 33.417 1.00 47.93 N
ATOM 17 C5 A A2090 117.138 113.744 34.278 1.00 47.70 C
ATOM 18 C6 A A2090 117.215 113.327 35.617 1.00 47.79 C
ATOM 19 N6 A A2090 118.331 113.374 36.342 1.00 46.49 N
ATOM 20 N1 A A2090 116.092 112.845 36.191 1.00 48.22 N
ATOM 21 C2 A A2090 114.977 112.779 35.456 1.00 48.95 C
ATOM 22 N3 A A2090 114.783 113.123 34.184 1.00 50.01 N
ATOM 23 C4 A A2090 115.918 113.604 33.643 1.00 48.54 C
ATOM 24 P C A2091 112.899 118.441 31.447 1.00 43.83 P
ATOM 25 OP1 C A2091 111.584 118.992 31.031 1.00 42.46 O
ATOM 26 OP2 C A2091 114.128 119.235 31.202 1.00 46.56 O
ATOM 27 O5' C A2091 112.863 118.096 33.002 1.00 42.39 O
TER
ATOM 1 O3' G B2103 121.249 110.573 40.889 1.00 58.62 O
ATOM 2 P A B2104 122.040 109.221 40.538 1.00 59.29 P
ATOM 3 OP1 A B2104 121.620 108.192 41.527 1.00 58.19 O
ATOM 4 OP2 A B2104 123.486 109.544 40.382 1.00 61.41 O
ATOM 5 O5' A B2104 121.478 108.822 39.102 1.00 58.23 O
ATOM 6 C5' A B2104 120.574 107.715 38.939 1.00 57.03 C
ATOM 7 C4' A B2104 119.143 108.206 38.916 1.00 55.21 C
ATOM 8 O4' A B2104 119.030 109.349 38.025 1.00 54.09 O
ATOM 9 C3' A B2104 118.128 107.190 38.415 1.00 54.61 C
ATOM 10 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 11 C2' A B2104 118.084 107.523 36.930 1.00 53.42 C
ATOM 12 O2' A B2104 116.922 107.064 36.284 1.00 55.10 O
ATOM 13 C1' A B2104 118.127 109.049 36.984 1.00 52.81 C
ATOM 14 N9 A B2104 118.597 109.691 35.759 1.00 53.34 N
ATOM 15 C8 A B2104 119.877 110.054 35.431 1.00 53.05 C
ATOM 16 N7 A B2104 119.987 110.579 34.237 1.00 54.33 N
ATOM 17 C5 A B2104 118.691 110.571 33.748 1.00 53.67 C
ATOM 18 C6 A B2104 118.142 110.983 32.525 1.00 53.33 C
ATOM 19 N6 A B2104 118.863 111.488 31.525 1.00 52.72 N
ATOM 20 N1 A B2104 116.809 110.847 32.358 1.00 53.95 N
ATOM 21 C2 A B2104 116.090 110.323 33.355 1.00 53.64 C
ATOM 22 N3 A B2104 116.492 109.889 34.545 1.00 53.45 N
ATOM 23 C4 A B2104 117.821 110.041 34.680 1.00 53.93 C
ATOM 24 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 25 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 26 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 27 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
TER
Atoms:
OP1: (118.551,118.581,29.107)
OP2: (119.245,117.643,31.393)
C3': (114.223,116.217,31.061)
C1': (115.137,114.054,31.260)
C5': (116.003,116.966,29.390)
O4': (115.738,114.679,30.137)
C8: (117.424,114.449,32.295)
O2': (112.803,114.231,30.857)
C6: (117.215,113.327,35.617)
C5: (117.138,113.744,34.278)
C4: (115.918,113.604,33.643)
P: (118.485,117.502,30.128)
C4': (115.020,115.898,29.810)
C2': (113.859,114.831,31.575)
C2: (114.977,112.779,35.456)
N1: (116.092,112.845,36.191)
N3: (114.783,113.123,34.184)
N6: (118.331,113.374,36.342)
N7: (118.078,114.287,33.417)
N9: (116.115,114.042,32.353)
O5': (116.948,117.228,30.454)
O3': (113.087,117.013,30.744)
OP2: (119.245,117.643,31.393)
C3': (114.223,116.217,31.061)
C1': (115.137,114.054,31.260)
C5': (116.003,116.966,29.390)
O4': (115.738,114.679,30.137)
C8: (117.424,114.449,32.295)
O2': (112.803,114.231,30.857)
C6: (117.215,113.327,35.617)
C5: (117.138,113.744,34.278)
C4: (115.918,113.604,33.643)
P: (118.485,117.502,30.128)
C4': (115.020,115.898,29.810)
C2': (113.859,114.831,31.575)
C2: (114.977,112.779,35.456)
N1: (116.092,112.845,36.191)
N3: (114.783,113.123,34.184)
N6: (118.331,113.374,36.342)
N7: (118.078,114.287,33.417)
N9: (116.115,114.042,32.353)
O5': (116.948,117.228,30.454)
O3': (113.087,117.013,30.744)
OP1: (121.620,108.192,41.527)
OP2: (123.486,109.544,40.382)
C3': (118.128,107.190,38.415)
C1': (118.127,109.049,36.984)
C5': (120.574,107.715,38.939)
O4': (119.030,109.349,38.025)
C8: (119.877,110.054,35.431)
O2': (116.922,107.064,36.284)
C6: (118.142,110.983,32.525)
C5: (118.691,110.571,33.748)
C4: (117.821,110.041,34.680)
P: (122.040,109.221,40.538)
C4': (119.143,108.206,38.916)
C2': (118.084,107.523,36.930)
C2: (116.090,110.323,33.355)
N1: (116.809,110.847,32.358)
N3: (116.492,109.889,34.545)
N6: (118.863,111.488,31.525)
N7: (119.987,110.579,34.237)
N9: (118.597,109.691,35.759)
O5': (121.478,108.822,39.102)
O3': (116.861,107.505,38.992)
OP2: (123.486,109.544,40.382)
C3': (118.128,107.190,38.415)
C1': (118.127,109.049,36.984)
C5': (120.574,107.715,38.939)
O4': (119.030,109.349,38.025)
C8: (119.877,110.054,35.431)
O2': (116.922,107.064,36.284)
C6: (118.142,110.983,32.525)
C5: (118.691,110.571,33.748)
C4: (117.821,110.041,34.680)
P: (122.040,109.221,40.538)
C4': (119.143,108.206,38.916)
C2': (118.084,107.523,36.930)
C2: (116.090,110.323,33.355)
N1: (116.809,110.847,32.358)
N3: (116.492,109.889,34.545)
N6: (118.863,111.488,31.525)
N7: (119.987,110.579,34.237)
N9: (118.597,109.691,35.759)
O5': (121.478,108.822,39.102)
O3': (116.861,107.505,38.992)
Image (generated by PyMOL):