Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A305:A325
Extra
PDB:
ATOM 1 O3' A A 304 9.756 148.307 43.519 1.00 55.77 O
ATOM 2 P A A 305 8.439 147.670 42.811 1.00 54.96 P
ATOM 3 OP1 A A 305 8.561 148.077 41.387 1.00 54.72 O
ATOM 4 OP2 A A 305 7.209 148.005 43.570 1.00 54.23 O
ATOM 5 O5' A A 305 8.642 146.088 42.791 1.00 53.01 O
ATOM 6 C5' A A 305 9.683 145.505 41.990 1.00 51.68 C
ATOM 7 C4' A A 305 9.687 143.995 42.117 1.00 50.91 C
ATOM 8 O4' A A 305 9.347 143.623 43.481 1.00 51.82 O
ATOM 9 C3' A A 305 8.719 143.200 41.238 1.00 50.60 C
ATOM 10 O3' A A 305 9.417 142.049 40.787 1.00 51.80 O
ATOM 11 C2' A A 305 7.634 142.767 42.220 1.00 50.57 C
ATOM 12 O2' A A 305 6.984 141.550 41.919 1.00 47.44 O
ATOM 13 C1' A A 305 8.482 142.525 43.444 1.00 50.59 C
ATOM 14 N9 A A 305 7.767 142.407 44.705 1.00 51.37 N
ATOM 15 C8 A A 305 6.626 143.018 45.187 1.00 51.55 C
ATOM 16 N7 A A 305 6.243 142.562 46.356 1.00 50.70 N
ATOM 17 C5 A A 305 7.211 141.613 46.673 1.00 50.98 C
ATOM 18 C6 A A 305 7.382 140.755 47.774 1.00 50.05 C
ATOM 19 N6 A A 305 6.542 140.682 48.805 1.00 50.83 N
ATOM 20 N1 A A 305 8.458 139.945 47.771 1.00 48.65 N
ATOM 21 C2 A A 305 9.293 139.979 46.727 1.00 49.78 C
ATOM 22 N3 A A 305 9.241 140.725 45.637 1.00 50.11 N
ATOM 23 C4 A A 305 8.162 141.528 45.672 1.00 51.38 C
ATOM 24 P C A 306 10.107 142.065 39.343 1.00 52.80 P
ATOM 25 OP1 C A 306 10.902 143.316 39.202 1.00 52.90 O
ATOM 26 OP2 C A 306 9.049 141.766 38.371 1.00 54.90 O
ATOM 27 O5' C A 306 11.115 140.840 39.392 1.00 54.83 O
TER
ATOM 1 O3' G B 324 16.492 145.262 46.912 1.00 50.69 O
ATOM 2 P A B 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A B 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A B 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A B 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A B 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A B 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A B 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A B 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A B 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A B 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A B 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A B 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A B 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A B 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A B 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A B 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A B 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A B 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A B 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A B 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A B 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A B 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C B 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C B 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C B 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C B 326 15.668 136.235 45.343 1.00 54.23 O
TER
ATOM 2 P A A 305 8.439 147.670 42.811 1.00 54.96 P
ATOM 3 OP1 A A 305 8.561 148.077 41.387 1.00 54.72 O
ATOM 4 OP2 A A 305 7.209 148.005 43.570 1.00 54.23 O
ATOM 5 O5' A A 305 8.642 146.088 42.791 1.00 53.01 O
ATOM 6 C5' A A 305 9.683 145.505 41.990 1.00 51.68 C
ATOM 7 C4' A A 305 9.687 143.995 42.117 1.00 50.91 C
ATOM 8 O4' A A 305 9.347 143.623 43.481 1.00 51.82 O
ATOM 9 C3' A A 305 8.719 143.200 41.238 1.00 50.60 C
ATOM 10 O3' A A 305 9.417 142.049 40.787 1.00 51.80 O
ATOM 11 C2' A A 305 7.634 142.767 42.220 1.00 50.57 C
ATOM 12 O2' A A 305 6.984 141.550 41.919 1.00 47.44 O
ATOM 13 C1' A A 305 8.482 142.525 43.444 1.00 50.59 C
ATOM 14 N9 A A 305 7.767 142.407 44.705 1.00 51.37 N
ATOM 15 C8 A A 305 6.626 143.018 45.187 1.00 51.55 C
ATOM 16 N7 A A 305 6.243 142.562 46.356 1.00 50.70 N
ATOM 17 C5 A A 305 7.211 141.613 46.673 1.00 50.98 C
ATOM 18 C6 A A 305 7.382 140.755 47.774 1.00 50.05 C
ATOM 19 N6 A A 305 6.542 140.682 48.805 1.00 50.83 N
ATOM 20 N1 A A 305 8.458 139.945 47.771 1.00 48.65 N
ATOM 21 C2 A A 305 9.293 139.979 46.727 1.00 49.78 C
ATOM 22 N3 A A 305 9.241 140.725 45.637 1.00 50.11 N
ATOM 23 C4 A A 305 8.162 141.528 45.672 1.00 51.38 C
ATOM 24 P C A 306 10.107 142.065 39.343 1.00 52.80 P
ATOM 25 OP1 C A 306 10.902 143.316 39.202 1.00 52.90 O
ATOM 26 OP2 C A 306 9.049 141.766 38.371 1.00 54.90 O
ATOM 27 O5' C A 306 11.115 140.840 39.392 1.00 54.83 O
TER
ATOM 1 O3' G B 324 16.492 145.262 46.912 1.00 50.69 O
ATOM 2 P A B 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A B 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A B 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A B 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A B 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A B 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A B 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A B 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A B 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A B 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A B 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A B 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A B 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A B 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A B 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A B 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A B 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A B 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A B 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A B 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A B 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A B 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C B 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C B 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C B 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C B 326 15.668 136.235 45.343 1.00 54.23 O
TER
Atoms:
OP1: (8.561,148.077,41.387)
OP2: (7.209,148.005,43.570)
C3': (8.719,143.200,41.238)
C1': (8.482,142.525,43.444)
C5': (9.683,145.505,41.990)
O4': (9.347,143.623,43.481)
C8: (6.626,143.018,45.187)
O2': (6.984,141.550,41.919)
C6: (7.382,140.755,47.774)
C5: (7.211,141.613,46.673)
C4: (8.162,141.528,45.672)
P: (8.439,147.670,42.811)
C4': (9.687,143.995,42.117)
C2': (7.634,142.767,42.220)
C2: (9.293,139.979,46.727)
N1: (8.458,139.945,47.771)
N3: (9.241,140.725,45.637)
N6: (6.542,140.682,48.805)
N7: (6.243,142.562,46.356)
N9: (7.767,142.407,44.705)
O5': (8.642,146.088,42.791)
O3': (9.417,142.049,40.787)
OP2: (7.209,148.005,43.570)
C3': (8.719,143.200,41.238)
C1': (8.482,142.525,43.444)
C5': (9.683,145.505,41.990)
O4': (9.347,143.623,43.481)
C8: (6.626,143.018,45.187)
O2': (6.984,141.550,41.919)
C6: (7.382,140.755,47.774)
C5: (7.211,141.613,46.673)
C4: (8.162,141.528,45.672)
P: (8.439,147.670,42.811)
C4': (9.687,143.995,42.117)
C2': (7.634,142.767,42.220)
C2: (9.293,139.979,46.727)
N1: (8.458,139.945,47.771)
N3: (9.241,140.725,45.637)
N6: (6.542,140.682,48.805)
N7: (6.243,142.562,46.356)
N9: (7.767,142.407,44.705)
O5': (8.642,146.088,42.791)
O3': (9.417,142.049,40.787)
OP1: (17.810,144.472,48.810)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
Image (generated by PyMOL):