Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12758:12893
Extra
PDB:
ATOM 1 O3' A A2757 45.340 42.307 26.993 1.00 47.37 O
ATOM 2 P A A2758 44.244 41.236 26.536 1.00 40.96 P
ATOM 3 OP1 A A2758 44.232 41.215 25.032 1.00 41.31 O
ATOM 4 OP2 A A2758 42.992 41.532 27.269 1.00 40.94 O
ATOM 5 O5' A A2758 44.899 39.904 27.076 1.00 40.42 O
ATOM 6 C5' A A2758 46.128 39.464 26.510 1.00 40.38 C
ATOM 7 C4' A A2758 46.881 38.559 27.427 1.00 39.90 C
ATOM 8 O4' A A2758 47.393 39.304 28.538 1.00 39.86 O
ATOM 9 C3' A A2758 46.095 37.447 28.055 1.00 39.47 C
ATOM 10 O3' A A2758 45.922 36.360 27.165 1.00 39.38 O
ATOM 11 C2' A A2758 46.949 37.112 29.271 1.00 39.10 C
ATOM 12 O2' A A2758 48.020 36.273 28.904 1.00 38.93 O
ATOM 13 C1' A A2758 47.528 38.467 29.637 1.00 39.39 C
ATOM 14 N9 A A2758 46.842 39.090 30.749 1.00 39.35 N
ATOM 15 C8 A A2758 46.046 40.182 30.662 1.00 39.71 C
ATOM 16 N7 A A2758 45.587 40.595 31.811 1.00 39.62 N
ATOM 17 C5 A A2758 46.148 39.704 32.681 1.00 39.17 C
ATOM 18 C6 A A2758 46.027 39.615 34.047 1.00 38.90 C
ATOM 19 N6 A A2758 45.280 40.496 34.722 1.00 39.06 N
ATOM 20 N1 A A2758 46.707 38.613 34.669 1.00 38.48 N
ATOM 21 C2 A A2758 47.434 37.781 33.907 1.00 38.37 C
ATOM 22 N3 A A2758 47.629 37.771 32.579 1.00 38.61 N
ATOM 23 C4 A A2758 46.933 38.776 32.046 1.00 39.01 C
ATOM 24 P U A2759 44.572 35.516 27.139 1.00 38.09 P
ATOM 25 OP1 U A2759 44.795 34.343 26.267 1.00 37.98 O
ATOM 26 OP2 U A2759 43.511 36.456 26.774 1.00 38.46 O
ATOM 27 O5' U A2759 44.388 35.068 28.653 1.00 37.64 O
TER
ATOM 1 O3' G B2892 47.691 42.491 38.936 1.00 42.07 O
ATOM 2 P A B2893 48.808 42.141 40.032 1.00 42.71 P
ATOM 3 OP1 A B2893 48.130 41.866 41.328 1.00 42.46 O
ATOM 4 OP2 A B2893 49.749 43.199 39.999 1.00 43.04 O
ATOM 5 O5' A B2893 49.455 40.811 39.444 1.00 42.39 O
ATOM 6 C5' A B2893 48.796 39.582 39.595 1.00 42.01 C
ATOM 7 C4' A B2893 49.500 38.497 38.865 1.00 41.79 C
ATOM 8 O4' A B2893 49.051 38.479 37.502 1.00 42.00 O
ATOM 9 C3' A B2893 51.012 38.625 38.840 1.00 41.83 C
ATOM 10 O3' A B2893 51.591 37.341 38.932 1.00 41.46 O
ATOM 11 C2' A B2893 51.301 39.213 37.475 1.00 42.20 C
ATOM 12 O2' A B2893 52.559 38.835 36.950 1.00 42.18 O
ATOM 13 C1' A B2893 50.131 38.692 36.623 1.00 42.19 C
ATOM 14 N9 A B2893 49.661 39.643 35.613 1.00 42.63 N
ATOM 15 C8 A B2893 48.885 40.726 35.863 1.00 42.92 C
ATOM 16 N7 A B2893 48.607 41.430 34.799 1.00 43.31 N
ATOM 17 C5 A B2893 49.205 40.759 33.765 1.00 43.28 C
ATOM 18 C6 A B2893 49.272 40.985 32.384 1.00 43.60 C
ATOM 19 N6 A B2893 48.720 41.985 31.702 1.00 44.04 N
ATOM 20 N1 A B2893 49.963 40.097 31.667 1.00 43.47 N
ATOM 21 C2 A B2893 50.552 39.089 32.280 1.00 43.06 C
ATOM 22 N3 A B2893 50.575 38.777 33.562 1.00 42.73 N
ATOM 23 C4 A B2893 49.864 39.655 34.262 1.00 42.87 C
ATOM 24 P A B2894 51.724 36.621 40.354 1.00 42.82 P
ATOM 25 OP1 A B2894 52.060 35.246 40.075 1.00 42.49 O
ATOM 26 OP2 A B2894 50.512 36.903 41.177 1.00 42.78 O
ATOM 27 O5' A B2894 52.956 37.335 40.987 1.00 42.95 O
TER
ATOM 2 P A A2758 44.244 41.236 26.536 1.00 40.96 P
ATOM 3 OP1 A A2758 44.232 41.215 25.032 1.00 41.31 O
ATOM 4 OP2 A A2758 42.992 41.532 27.269 1.00 40.94 O
ATOM 5 O5' A A2758 44.899 39.904 27.076 1.00 40.42 O
ATOM 6 C5' A A2758 46.128 39.464 26.510 1.00 40.38 C
ATOM 7 C4' A A2758 46.881 38.559 27.427 1.00 39.90 C
ATOM 8 O4' A A2758 47.393 39.304 28.538 1.00 39.86 O
ATOM 9 C3' A A2758 46.095 37.447 28.055 1.00 39.47 C
ATOM 10 O3' A A2758 45.922 36.360 27.165 1.00 39.38 O
ATOM 11 C2' A A2758 46.949 37.112 29.271 1.00 39.10 C
ATOM 12 O2' A A2758 48.020 36.273 28.904 1.00 38.93 O
ATOM 13 C1' A A2758 47.528 38.467 29.637 1.00 39.39 C
ATOM 14 N9 A A2758 46.842 39.090 30.749 1.00 39.35 N
ATOM 15 C8 A A2758 46.046 40.182 30.662 1.00 39.71 C
ATOM 16 N7 A A2758 45.587 40.595 31.811 1.00 39.62 N
ATOM 17 C5 A A2758 46.148 39.704 32.681 1.00 39.17 C
ATOM 18 C6 A A2758 46.027 39.615 34.047 1.00 38.90 C
ATOM 19 N6 A A2758 45.280 40.496 34.722 1.00 39.06 N
ATOM 20 N1 A A2758 46.707 38.613 34.669 1.00 38.48 N
ATOM 21 C2 A A2758 47.434 37.781 33.907 1.00 38.37 C
ATOM 22 N3 A A2758 47.629 37.771 32.579 1.00 38.61 N
ATOM 23 C4 A A2758 46.933 38.776 32.046 1.00 39.01 C
ATOM 24 P U A2759 44.572 35.516 27.139 1.00 38.09 P
ATOM 25 OP1 U A2759 44.795 34.343 26.267 1.00 37.98 O
ATOM 26 OP2 U A2759 43.511 36.456 26.774 1.00 38.46 O
ATOM 27 O5' U A2759 44.388 35.068 28.653 1.00 37.64 O
TER
ATOM 1 O3' G B2892 47.691 42.491 38.936 1.00 42.07 O
ATOM 2 P A B2893 48.808 42.141 40.032 1.00 42.71 P
ATOM 3 OP1 A B2893 48.130 41.866 41.328 1.00 42.46 O
ATOM 4 OP2 A B2893 49.749 43.199 39.999 1.00 43.04 O
ATOM 5 O5' A B2893 49.455 40.811 39.444 1.00 42.39 O
ATOM 6 C5' A B2893 48.796 39.582 39.595 1.00 42.01 C
ATOM 7 C4' A B2893 49.500 38.497 38.865 1.00 41.79 C
ATOM 8 O4' A B2893 49.051 38.479 37.502 1.00 42.00 O
ATOM 9 C3' A B2893 51.012 38.625 38.840 1.00 41.83 C
ATOM 10 O3' A B2893 51.591 37.341 38.932 1.00 41.46 O
ATOM 11 C2' A B2893 51.301 39.213 37.475 1.00 42.20 C
ATOM 12 O2' A B2893 52.559 38.835 36.950 1.00 42.18 O
ATOM 13 C1' A B2893 50.131 38.692 36.623 1.00 42.19 C
ATOM 14 N9 A B2893 49.661 39.643 35.613 1.00 42.63 N
ATOM 15 C8 A B2893 48.885 40.726 35.863 1.00 42.92 C
ATOM 16 N7 A B2893 48.607 41.430 34.799 1.00 43.31 N
ATOM 17 C5 A B2893 49.205 40.759 33.765 1.00 43.28 C
ATOM 18 C6 A B2893 49.272 40.985 32.384 1.00 43.60 C
ATOM 19 N6 A B2893 48.720 41.985 31.702 1.00 44.04 N
ATOM 20 N1 A B2893 49.963 40.097 31.667 1.00 43.47 N
ATOM 21 C2 A B2893 50.552 39.089 32.280 1.00 43.06 C
ATOM 22 N3 A B2893 50.575 38.777 33.562 1.00 42.73 N
ATOM 23 C4 A B2893 49.864 39.655 34.262 1.00 42.87 C
ATOM 24 P A B2894 51.724 36.621 40.354 1.00 42.82 P
ATOM 25 OP1 A B2894 52.060 35.246 40.075 1.00 42.49 O
ATOM 26 OP2 A B2894 50.512 36.903 41.177 1.00 42.78 O
ATOM 27 O5' A B2894 52.956 37.335 40.987 1.00 42.95 O
TER
Atoms:
OP1: (44.232,41.215,25.032)
OP2: (42.992,41.532,27.269)
C3': (46.095,37.447,28.055)
C1': (47.528,38.467,29.637)
C5': (46.128,39.464,26.510)
O4': (47.393,39.304,28.538)
C8: (46.046,40.182,30.662)
O2': (48.020,36.273,28.904)
C6: (46.027,39.615,34.047)
C5: (46.148,39.704,32.681)
C4: (46.933,38.776,32.046)
P: (44.244,41.236,26.536)
C4': (46.881,38.559,27.427)
C2': (46.949,37.112,29.271)
C2: (47.434,37.781,33.907)
N1: (46.707,38.613,34.669)
N3: (47.629,37.771,32.579)
N6: (45.280,40.496,34.722)
N7: (45.587,40.595,31.811)
N9: (46.842,39.090,30.749)
O5': (44.899,39.904,27.076)
O3': (45.922,36.360,27.165)
OP2: (42.992,41.532,27.269)
C3': (46.095,37.447,28.055)
C1': (47.528,38.467,29.637)
C5': (46.128,39.464,26.510)
O4': (47.393,39.304,28.538)
C8: (46.046,40.182,30.662)
O2': (48.020,36.273,28.904)
C6: (46.027,39.615,34.047)
C5: (46.148,39.704,32.681)
C4: (46.933,38.776,32.046)
P: (44.244,41.236,26.536)
C4': (46.881,38.559,27.427)
C2': (46.949,37.112,29.271)
C2: (47.434,37.781,33.907)
N1: (46.707,38.613,34.669)
N3: (47.629,37.771,32.579)
N6: (45.280,40.496,34.722)
N7: (45.587,40.595,31.811)
N9: (46.842,39.090,30.749)
O5': (44.899,39.904,27.076)
O3': (45.922,36.360,27.165)
OP1: (48.130,41.866,41.328)
OP2: (49.749,43.199,39.999)
C3': (51.012,38.625,38.840)
C1': (50.131,38.692,36.623)
C5': (48.796,39.582,39.595)
O4': (49.051,38.479,37.502)
C8: (48.885,40.726,35.863)
O2': (52.559,38.835,36.950)
C6: (49.272,40.985,32.384)
C5: (49.205,40.759,33.765)
C4: (49.864,39.655,34.262)
P: (48.808,42.141,40.032)
C4': (49.500,38.497,38.865)
C2': (51.301,39.213,37.475)
C2: (50.552,39.089,32.280)
N1: (49.963,40.097,31.667)
N3: (50.575,38.777,33.562)
N6: (48.720,41.985,31.702)
N7: (48.607,41.430,34.799)
N9: (49.661,39.643,35.613)
O5': (49.455,40.811,39.444)
O3': (51.591,37.341,38.932)
OP2: (49.749,43.199,39.999)
C3': (51.012,38.625,38.840)
C1': (50.131,38.692,36.623)
C5': (48.796,39.582,39.595)
O4': (49.051,38.479,37.502)
C8: (48.885,40.726,35.863)
O2': (52.559,38.835,36.950)
C6: (49.272,40.985,32.384)
C5: (49.205,40.759,33.765)
C4: (49.864,39.655,34.262)
P: (48.808,42.141,40.032)
C4': (49.500,38.497,38.865)
C2': (51.301,39.213,37.475)
C2: (50.552,39.089,32.280)
N1: (49.963,40.097,31.667)
N3: (50.575,38.777,33.562)
N6: (48.720,41.985,31.702)
N7: (48.607,41.430,34.799)
N9: (49.661,39.643,35.613)
O5': (49.455,40.811,39.444)
O3': (51.591,37.341,38.932)
Image (generated by PyMOL):