ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q96:B10:B18

Extra

PDB:
ATOM 1 O3' U A 9 -6.917 13.716 68.265 1.00 21.34 O
ATOM 2 P A A 10 -6.317 13.589 69.749 1.00 21.48 P
ATOM 3 OP1 A A 10 -7.395 13.041 70.612 1.00 27.33 O
ATOM 4 OP2 A A 10 -5.663 14.871 70.113 1.00 20.17 O
ATOM 5 O5' A A 10 -5.184 12.479 69.621 1.00 17.10 O
ATOM 6 C5' A A 10 -5.489 11.160 69.190 1.00 16.92 C
ATOM 7 C4' A A 10 -4.221 10.350 69.073 1.00 18.19 C
ATOM 8 O4' A A 10 -3.430 10.840 67.958 1.00 18.26 O
ATOM 9 C3' A A 10 -3.278 10.429 70.264 1.00 20.79 C
ATOM 10 O3' A A 10 -3.659 9.499 71.274 1.00 20.17 O
ATOM 11 C2' A A 10 -1.941 10.064 69.634 1.00 14.87 C
ATOM 12 O2' A A 10 -1.775 8.673 69.455 1.00 18.27 O
ATOM 13 C1' A A 10 -2.051 10.760 68.278 1.00 16.52 C
ATOM 14 N9 A A 10 -1.482 12.110 68.257 1.00 15.03 N
ATOM 15 C8 A A 10 -2.135 13.323 68.269 1.00 14.51 C
ATOM 16 N7 A A 10 -1.328 14.358 68.233 1.00 16.70 N
ATOM 17 C5 A A 10 -0.060 13.791 68.195 1.00 13.23 C
ATOM 18 C6 A A 10 1.230 14.351 68.140 1.00 19.64 C
ATOM 19 N6 A A 10 1.474 15.664 68.105 1.00 12.72 N
ATOM 20 N1 A A 10 2.281 13.502 68.117 1.00 17.17 N
ATOM 21 C2 A A 10 2.044 12.186 68.144 1.00 16.39 C
ATOM 22 N3 A A 10 0.883 11.539 68.188 1.00 15.56 N
ATOM 23 C4 A A 10 -0.141 12.409 68.213 1.00 13.65 C
ATOM 24 P U A 11 -3.730 9.976 72.804 1.00 23.03 P
ATOM 25 OP1 U A 11 -3.896 8.751 73.626 1.00 23.17 O
ATOM 26 OP2 U A 11 -4.705 11.086 72.934 1.00 24.87 O
ATOM 27 O5' U A 11 -2.285 10.574 73.090 1.00 21.74 O
TER

ATOM 1 O3' G B 17 5.144 18.983 65.574 1.00 25.54 O
ATOM 2 N9 A B 18 2.900 13.588 64.902 1.00 18.60 N
ATOM 3 C8 A B 18 1.721 14.264 64.691 1.00 19.06 C
ATOM 4 N7 A B 18 0.665 13.490 64.655 1.00 16.04 N
ATOM 5 C5 A B 18 1.178 12.216 64.840 1.00 17.86 C
ATOM 6 C6 A B 18 0.566 10.953 64.906 1.00 17.40 C
ATOM 7 N6 A B 18 -0.751 10.760 64.787 1.00 19.40 N
ATOM 8 N1 A B 18 1.361 9.880 65.102 1.00 25.24 N
ATOM 9 C2 A B 18 2.682 10.074 65.216 1.00 13.66 C
ATOM 10 N3 A B 18 3.375 11.207 65.168 1.00 18.77 N
ATOM 11 C4 A B 18 2.555 12.257 64.979 1.00 15.24 C
ATOM 12 P A B 18 4.678 19.263 64.065 0.50 29.66 P
ATOM 13 OP1 A B 18 5.722 18.705 63.163 0.50 29.57 O
ATOM 14 OP2 A B 18 4.315 20.698 63.964 0.50 26.70 O
ATOM 15 O5' A B 18 3.341 18.401 63.938 0.50 25.83 O
ATOM 16 C5' A B 18 3.319 17.107 63.330 0.50 20.84 C
ATOM 17 C4' A B 18 4.440 16.233 63.854 0.50 22.29 C
ATOM 18 O4' A B 18 4.061 15.609 65.114 0.50 21.43 O
ATOM 19 C3' A B 18 4.808 15.096 62.914 0.50 23.16 C
ATOM 20 O3' A B 18 5.882 15.493 62.069 0.50 24.68 O
ATOM 21 C2' A B 18 5.187 13.963 63.862 0.50 24.48 C
ATOM 22 O2' A B 18 6.527 14.045 64.307 0.50 25.84 O
ATOM 23 C1' A B 18 4.227 14.203 65.028 0.50 19.30 C
ATOM 24 P A B 19 5.784 15.230 60.488 0.50 24.01 P
ATOM 25 OP1 A B 19 6.999 15.803 59.855 0.50 27.25 O
ATOM 26 OP2 A B 19 4.442 15.666 60.021 0.50 25.42 O
ATOM 27 O5' A B 19 5.864 13.643 60.375 0.50 22.85 O
TER

Atoms:
OP1: (-7.395,13.041,70.612)
OP2: (-5.663,14.871,70.113)
C3': (-3.278,10.429,70.264)
C1': (-2.051,10.760,68.278)
C5': (-5.489,11.160,69.190)
O4': (-3.430,10.840,67.958)
C8: (-2.135,13.323,68.269)
O2': (-1.775,8.673,69.455)
C6: (1.230,14.351,68.140)
C5: (-0.060,13.791,68.195)
C4: (-0.141,12.409,68.213)
P: (-6.317,13.589,69.749)
C4': (-4.221,10.350,69.073)
C2': (-1.941,10.064,69.634)
C2: (2.044,12.186,68.144)
N1: (2.281,13.502,68.117)
N3: (0.883,11.539,68.188)
N6: (1.474,15.664,68.105)
N7: (-1.328,14.358,68.233)
N9: (-1.482,12.110,68.257)
O5': (-5.184,12.479,69.621)
O3': (-3.659,9.499,71.274)
OP1: (5.722,18.705,63.163)
OP2: (4.315,20.698,63.964)
C3': (4.808,15.096,62.914)
C1': (4.227,14.203,65.028)
C5': (3.319,17.107,63.330)
O4': (4.061,15.609,65.114)
C8: (1.721,14.264,64.691)
O2': (6.527,14.045,64.307)
C6: (0.566,10.953,64.906)
C5: (1.178,12.216,64.840)
C4: (2.555,12.257,64.979)
N9: (2.900,13.588,64.902)
C4': (4.440,16.233,63.854)
C2': (5.187,13.963,63.862)
C2: (2.682,10.074,65.216)
N1: (1.361,9.880,65.102)
N3: (3.375,11.207,65.168)
N6: (-0.751,10.760,64.787)
N7: (0.665,13.490,64.655)
P: (4.678,19.263,64.065)
O5': (3.341,18.401,63.938)
O3': (5.882,15.493,62.069)
Image (generated by PyMOL):
PyMOL image
show in jmol