Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2614:A2638
Extra
PDB:
ATOM 1 O3' U A2613 44.789 118.389 149.175 1.00 44.06 O
ATOM 2 P A A2614 45.909 117.403 149.741 1.00 45.15 P
ATOM 3 OP1 A A2614 45.391 116.029 149.567 1.00 44.09 O
ATOM 4 OP2 A A2614 46.323 117.867 151.088 1.00 43.83 O
ATOM 5 O5' A A2614 47.117 117.625 148.726 1.00 44.91 O
ATOM 6 C5' A A2614 47.037 117.130 147.377 1.00 45.49 C
ATOM 7 C4' A A2614 48.387 117.191 146.710 1.00 46.38 C
ATOM 8 O4' A A2614 48.829 118.566 146.665 1.00 46.66 O
ATOM 9 C3' A A2614 49.503 116.460 147.427 1.00 45.72 C
ATOM 10 O3' A A2614 49.471 115.072 147.129 1.00 45.04 O
ATOM 11 C2' A A2614 50.753 117.185 146.934 1.00 46.45 C
ATOM 12 O2' A A2614 51.244 116.779 145.670 1.00 46.50 O
ATOM 13 C1' A A2614 50.237 118.622 146.827 1.00 47.44 C
ATOM 14 N9 A A2614 50.517 119.451 147.997 1.00 48.73 N
ATOM 15 C8 A A2614 49.633 119.816 148.976 1.00 49.26 C
ATOM 16 N7 A A2614 50.145 120.611 149.879 1.00 49.53 N
ATOM 17 C5 A A2614 51.459 120.774 149.473 1.00 49.36 C
ATOM 18 C6 A A2614 52.517 121.516 150.003 1.00 50.30 C
ATOM 19 N6 A A2614 52.395 122.287 151.086 1.00 49.81 N
ATOM 20 N1 A A2614 53.713 121.454 149.372 1.00 50.14 N
ATOM 21 C2 A A2614 53.813 120.703 148.271 1.00 50.82 C
ATOM 22 N3 A A2614 52.880 119.969 147.666 1.00 50.36 N
ATOM 23 C4 A A2614 51.710 120.049 148.326 1.00 49.30 C
ATOM 24 P A A2615 49.704 114.005 148.300 1.00 44.94 P
ATOM 25 OP1 A A2615 49.566 112.661 147.689 1.00 44.53 O
ATOM 26 OP2 A A2615 48.873 114.368 149.478 1.00 43.79 O
ATOM 27 O5' A A2615 51.228 114.234 148.656 1.00 43.63 O
TER
ATOM 1 O3' G B2637 52.671 125.579 155.057 1.00 50.23 O
ATOM 2 P A B2638 52.524 126.795 154.024 1.00 51.76 P
ATOM 3 OP1 A B2638 53.609 127.773 154.273 1.00 51.30 O
ATOM 4 OP2 A B2638 51.114 127.270 153.999 1.00 50.49 O
ATOM 5 O5' A B2638 52.872 126.089 152.646 1.00 51.13 O
ATOM 6 C5' A B2638 52.977 126.859 151.458 1.00 50.34 C
ATOM 7 C4' A B2638 54.165 126.423 150.645 1.00 49.22 C
ATOM 8 O4' A B2638 54.040 125.031 150.272 1.00 49.37 O
ATOM 9 C3' A B2638 54.206 127.176 149.336 1.00 48.45 C
ATOM 10 O3' A B2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 11 C2' A B2638 54.901 126.208 148.406 1.00 47.79 C
ATOM 12 O2' A B2638 56.289 126.231 148.630 1.00 47.14 O
ATOM 13 C1' A B2638 54.332 124.877 148.896 1.00 48.11 C
ATOM 14 N9 A B2638 53.115 124.383 148.240 1.00 48.02 N
ATOM 15 C8 A B2638 51.853 124.309 148.790 1.00 47.38 C
ATOM 16 N7 A B2638 50.972 123.732 148.016 1.00 48.45 N
ATOM 17 C5 A B2638 51.689 123.429 146.863 1.00 48.81 C
ATOM 18 C6 A B2638 51.320 122.810 145.652 1.00 49.11 C
ATOM 19 N6 A B2638 50.093 122.339 145.399 1.00 48.37 N
ATOM 20 N1 A B2638 52.269 122.686 144.698 1.00 49.66 N
ATOM 21 C2 A B2638 53.496 123.150 144.953 1.00 48.93 C
ATOM 22 N3 A B2638 53.965 123.741 146.049 1.00 48.57 N
ATOM 23 C4 A B2638 53.002 123.848 146.979 1.00 48.47 C
ATOM 24 P A B2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 25 OP1 A B2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 26 OP2 A B2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 27 O5' A B2639 54.700 130.627 148.464 1.00 47.03 O
TER
ATOM 2 P A A2614 45.909 117.403 149.741 1.00 45.15 P
ATOM 3 OP1 A A2614 45.391 116.029 149.567 1.00 44.09 O
ATOM 4 OP2 A A2614 46.323 117.867 151.088 1.00 43.83 O
ATOM 5 O5' A A2614 47.117 117.625 148.726 1.00 44.91 O
ATOM 6 C5' A A2614 47.037 117.130 147.377 1.00 45.49 C
ATOM 7 C4' A A2614 48.387 117.191 146.710 1.00 46.38 C
ATOM 8 O4' A A2614 48.829 118.566 146.665 1.00 46.66 O
ATOM 9 C3' A A2614 49.503 116.460 147.427 1.00 45.72 C
ATOM 10 O3' A A2614 49.471 115.072 147.129 1.00 45.04 O
ATOM 11 C2' A A2614 50.753 117.185 146.934 1.00 46.45 C
ATOM 12 O2' A A2614 51.244 116.779 145.670 1.00 46.50 O
ATOM 13 C1' A A2614 50.237 118.622 146.827 1.00 47.44 C
ATOM 14 N9 A A2614 50.517 119.451 147.997 1.00 48.73 N
ATOM 15 C8 A A2614 49.633 119.816 148.976 1.00 49.26 C
ATOM 16 N7 A A2614 50.145 120.611 149.879 1.00 49.53 N
ATOM 17 C5 A A2614 51.459 120.774 149.473 1.00 49.36 C
ATOM 18 C6 A A2614 52.517 121.516 150.003 1.00 50.30 C
ATOM 19 N6 A A2614 52.395 122.287 151.086 1.00 49.81 N
ATOM 20 N1 A A2614 53.713 121.454 149.372 1.00 50.14 N
ATOM 21 C2 A A2614 53.813 120.703 148.271 1.00 50.82 C
ATOM 22 N3 A A2614 52.880 119.969 147.666 1.00 50.36 N
ATOM 23 C4 A A2614 51.710 120.049 148.326 1.00 49.30 C
ATOM 24 P A A2615 49.704 114.005 148.300 1.00 44.94 P
ATOM 25 OP1 A A2615 49.566 112.661 147.689 1.00 44.53 O
ATOM 26 OP2 A A2615 48.873 114.368 149.478 1.00 43.79 O
ATOM 27 O5' A A2615 51.228 114.234 148.656 1.00 43.63 O
TER
ATOM 1 O3' G B2637 52.671 125.579 155.057 1.00 50.23 O
ATOM 2 P A B2638 52.524 126.795 154.024 1.00 51.76 P
ATOM 3 OP1 A B2638 53.609 127.773 154.273 1.00 51.30 O
ATOM 4 OP2 A B2638 51.114 127.270 153.999 1.00 50.49 O
ATOM 5 O5' A B2638 52.872 126.089 152.646 1.00 51.13 O
ATOM 6 C5' A B2638 52.977 126.859 151.458 1.00 50.34 C
ATOM 7 C4' A B2638 54.165 126.423 150.645 1.00 49.22 C
ATOM 8 O4' A B2638 54.040 125.031 150.272 1.00 49.37 O
ATOM 9 C3' A B2638 54.206 127.176 149.336 1.00 48.45 C
ATOM 10 O3' A B2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 11 C2' A B2638 54.901 126.208 148.406 1.00 47.79 C
ATOM 12 O2' A B2638 56.289 126.231 148.630 1.00 47.14 O
ATOM 13 C1' A B2638 54.332 124.877 148.896 1.00 48.11 C
ATOM 14 N9 A B2638 53.115 124.383 148.240 1.00 48.02 N
ATOM 15 C8 A B2638 51.853 124.309 148.790 1.00 47.38 C
ATOM 16 N7 A B2638 50.972 123.732 148.016 1.00 48.45 N
ATOM 17 C5 A B2638 51.689 123.429 146.863 1.00 48.81 C
ATOM 18 C6 A B2638 51.320 122.810 145.652 1.00 49.11 C
ATOM 19 N6 A B2638 50.093 122.339 145.399 1.00 48.37 N
ATOM 20 N1 A B2638 52.269 122.686 144.698 1.00 49.66 N
ATOM 21 C2 A B2638 53.496 123.150 144.953 1.00 48.93 C
ATOM 22 N3 A B2638 53.965 123.741 146.049 1.00 48.57 N
ATOM 23 C4 A B2638 53.002 123.848 146.979 1.00 48.47 C
ATOM 24 P A B2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 25 OP1 A B2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 26 OP2 A B2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 27 O5' A B2639 54.700 130.627 148.464 1.00 47.03 O
TER
Atoms:
OP1: (45.391,116.029,149.567)
OP2: (46.323,117.867,151.088)
C3': (49.503,116.460,147.427)
C1': (50.237,118.622,146.827)
C5': (47.037,117.130,147.377)
O4': (48.829,118.566,146.665)
C8: (49.633,119.816,148.976)
O2': (51.244,116.779,145.670)
C6: (52.517,121.516,150.003)
C5: (51.459,120.774,149.473)
C4: (51.710,120.049,148.326)
P: (45.909,117.403,149.741)
C4': (48.387,117.191,146.710)
C2': (50.753,117.185,146.934)
C2: (53.813,120.703,148.271)
N1: (53.713,121.454,149.372)
N3: (52.880,119.969,147.666)
N6: (52.395,122.287,151.086)
N7: (50.145,120.611,149.879)
N9: (50.517,119.451,147.997)
O5': (47.117,117.625,148.726)
O3': (49.471,115.072,147.129)
OP2: (46.323,117.867,151.088)
C3': (49.503,116.460,147.427)
C1': (50.237,118.622,146.827)
C5': (47.037,117.130,147.377)
O4': (48.829,118.566,146.665)
C8: (49.633,119.816,148.976)
O2': (51.244,116.779,145.670)
C6: (52.517,121.516,150.003)
C5: (51.459,120.774,149.473)
C4: (51.710,120.049,148.326)
P: (45.909,117.403,149.741)
C4': (48.387,117.191,146.710)
C2': (50.753,117.185,146.934)
C2: (53.813,120.703,148.271)
N1: (53.713,121.454,149.372)
N3: (52.880,119.969,147.666)
N6: (52.395,122.287,151.086)
N7: (50.145,120.611,149.879)
N9: (50.517,119.451,147.997)
O5': (47.117,117.625,148.726)
O3': (49.471,115.072,147.129)
OP1: (53.609,127.773,154.273)
OP2: (51.114,127.270,153.999)
C3': (54.206,127.176,149.336)
C1': (54.332,124.877,148.896)
C5': (52.977,126.859,151.458)
O4': (54.040,125.031,150.272)
C8: (51.853,124.309,148.790)
O2': (56.289,126.231,148.630)
C6: (51.320,122.810,145.652)
C5: (51.689,123.429,146.863)
C4: (53.002,123.848,146.979)
P: (52.524,126.795,154.024)
C4': (54.165,126.423,150.645)
C2': (54.901,126.208,148.406)
C2: (53.496,123.150,144.953)
N1: (52.269,122.686,144.698)
N3: (53.965,123.741,146.049)
N6: (50.093,122.339,145.399)
N7: (50.972,123.732,148.016)
N9: (53.115,124.383,148.240)
O5': (52.872,126.089,152.646)
O3': (54.935,128.368,149.506)
OP2: (51.114,127.270,153.999)
C3': (54.206,127.176,149.336)
C1': (54.332,124.877,148.896)
C5': (52.977,126.859,151.458)
O4': (54.040,125.031,150.272)
C8: (51.853,124.309,148.790)
O2': (56.289,126.231,148.630)
C6: (51.320,122.810,145.652)
C5: (51.689,123.429,146.863)
C4: (53.002,123.848,146.979)
P: (52.524,126.795,154.024)
C4': (54.165,126.423,150.645)
C2': (54.901,126.208,148.406)
C2: (53.496,123.150,144.953)
N1: (52.269,122.686,144.698)
N3: (53.965,123.741,146.049)
N6: (50.093,122.339,145.399)
N7: (50.972,123.732,148.016)
N9: (53.115,124.383,148.240)
O5': (52.872,126.089,152.646)
O3': (54.935,128.368,149.506)
Image (generated by PyMOL):