ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0648:0733

Extra

PDB:
ATOM 1 O3' A A 647 31.764 78.523 35.950 1.00 46.17 O
ATOM 2 P A A 648 31.231 76.997 36.001 1.00 44.40 P
ATOM 3 OP1 A A 648 31.126 76.531 34.590 1.00 45.01 O
ATOM 4 OP2 A A 648 30.036 76.952 36.874 1.00 43.01 O
ATOM 5 O5' A A 648 32.434 76.200 36.676 1.00 41.22 O
ATOM 6 C5' A A 648 33.345 75.420 35.881 1.00 42.67 C
ATOM 7 C4' A A 648 34.633 76.178 35.656 1.00 43.97 C
ATOM 8 O4' A A 648 35.220 76.538 36.941 1.00 44.42 O
ATOM 9 C3' A A 648 35.715 75.405 34.900 1.00 43.85 C
ATOM 10 O3' A A 648 36.488 76.285 34.089 1.00 45.30 O
ATOM 11 C2' A A 648 36.600 74.894 36.035 1.00 43.92 C
ATOM 12 O2' A A 648 37.934 74.612 35.662 1.00 42.49 O
ATOM 13 C1' A A 648 36.555 76.083 36.984 1.00 45.62 C
ATOM 14 N9 A A 648 36.920 75.799 38.372 1.00 49.64 N
ATOM 15 C8 A A 648 36.477 74.783 39.188 1.00 52.32 C
ATOM 16 N7 A A 648 36.989 74.812 40.394 1.00 51.69 N
ATOM 17 C5 A A 648 37.832 75.915 40.373 1.00 51.76 C
ATOM 18 C6 A A 648 38.670 76.487 41.352 1.00 50.73 C
ATOM 19 N6 A A 648 38.809 75.996 42.586 1.00 50.23 N
ATOM 20 N1 A A 648 39.370 77.590 41.011 1.00 50.03 N
ATOM 21 C2 A A 648 39.237 78.078 39.768 1.00 51.18 C
ATOM 22 N3 A A 648 38.489 77.629 38.762 1.00 50.81 N
ATOM 23 C4 A A 648 37.801 76.532 39.133 1.00 50.75 C
ATOM 24 P G A 649 35.854 76.926 32.753 1.00 46.96 P
ATOM 25 OP1 G A 649 35.021 75.894 32.067 1.00 50.23 O
ATOM 26 OP2 G A 649 36.962 77.584 32.011 1.00 48.48 O
ATOM 27 O5' G A 649 34.869 78.056 33.298 1.00 45.42 O
TER

ATOM 1 O3' G B 732 36.936 72.706 44.957 1.00 57.72 O
ATOM 2 P A B 733 36.612 72.711 46.535 1.00 57.26 P
ATOM 3 OP1 A B 733 37.694 71.958 47.212 1.00 54.75 O
ATOM 4 OP2 A B 733 35.193 72.319 46.752 1.00 54.69 O
ATOM 5 O5' A B 733 36.764 74.251 46.936 1.00 56.01 O
ATOM 6 C5' A B 733 38.031 74.946 46.801 1.00 52.67 C
ATOM 7 C4' A B 733 37.813 76.375 46.326 1.00 52.40 C
ATOM 8 O4' A B 733 37.419 76.380 44.921 1.00 50.92 O
ATOM 9 C3' A B 733 36.749 77.186 47.069 1.00 50.56 C
ATOM 10 O3' A B 733 37.067 78.585 47.043 1.00 51.36 O
ATOM 11 C2' A B 733 35.542 77.018 46.151 1.00 50.93 C
ATOM 12 O2' A B 733 34.577 78.040 46.306 1.00 49.98 O
ATOM 13 C1' A B 733 36.210 77.090 44.776 1.00 49.61 C
ATOM 14 N9 A B 733 35.456 76.509 43.662 1.00 53.40 N
ATOM 15 C8 A B 733 34.813 75.296 43.621 1.00 53.86 C
ATOM 16 N7 A B 733 34.190 75.066 42.490 1.00 53.30 N
ATOM 17 C5 A B 733 34.443 76.197 41.730 1.00 53.35 C
ATOM 18 C6 A B 733 34.047 76.574 40.432 1.00 53.68 C
ATOM 19 N6 A B 733 33.261 75.830 39.654 1.00 50.50 N
ATOM 20 N1 A B 733 34.484 77.762 39.962 1.00 53.38 N
ATOM 21 C2 A B 733 35.248 78.521 40.754 1.00 52.83 C
ATOM 22 N3 A B 733 35.673 78.286 41.993 1.00 54.34 N
ATOM 23 C4 A B 733 35.233 77.091 42.431 1.00 53.84 C
ATOM 24 P G B 734 38.200 79.204 48.009 1.00 46.66 P
ATOM 25 OP1 G B 734 39.110 78.144 48.505 1.00 46.55 O
ATOM 26 OP2 G B 734 37.508 80.099 48.975 1.00 45.21 O
ATOM 27 O5' G B 734 39.047 80.098 46.996 1.00 47.41 O
TER

Atoms:
OP1: (31.126,76.531,34.590)
OP2: (30.036,76.952,36.874)
C3': (35.715,75.405,34.900)
C1': (36.555,76.083,36.984)
C5': (33.345,75.420,35.881)
O4': (35.220,76.538,36.941)
C8: (36.477,74.783,39.188)
O2': (37.934,74.612,35.662)
C6: (38.670,76.487,41.352)
C5: (37.832,75.915,40.373)
C4: (37.801,76.532,39.133)
P: (31.231,76.997,36.001)
C4': (34.633,76.178,35.656)
C2': (36.600,74.894,36.035)
C2: (39.237,78.078,39.768)
N1: (39.370,77.590,41.011)
N3: (38.489,77.629,38.762)
N6: (38.809,75.996,42.586)
N7: (36.989,74.812,40.394)
N9: (36.920,75.799,38.372)
O5': (32.434,76.200,36.676)
O3': (36.488,76.285,34.089)
OP1: (37.694,71.958,47.212)
OP2: (35.193,72.319,46.752)
C3': (36.749,77.186,47.069)
C1': (36.210,77.090,44.776)
C5': (38.031,74.946,46.801)
O4': (37.419,76.380,44.921)
C8: (34.813,75.296,43.621)
O2': (34.577,78.040,46.306)
C6: (34.047,76.574,40.432)
C5: (34.443,76.197,41.730)
C4: (35.233,77.091,42.431)
P: (36.612,72.711,46.535)
C4': (37.813,76.375,46.326)
C2': (35.542,77.018,46.151)
C2: (35.248,78.521,40.754)
N1: (34.484,77.762,39.962)
N3: (35.673,78.286,41.993)
N6: (33.261,75.830,39.654)
N7: (34.190,75.066,42.490)
N9: (35.456,76.509,43.662)
O5': (36.764,74.251,46.936)
O3': (37.067,78.585,47.043)
Image (generated by PyMOL):
PyMOL image
show in jmol