ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0317:0335

Extra

PDB:
ATOM 1 O3' U A 316 18.899 124.259 21.613 1.00 40.56 O
ATOM 2 P A A 317 18.421 124.126 23.147 1.00 40.39 P
ATOM 3 OP1 A A 317 19.300 123.102 23.766 1.00 40.41 O
ATOM 4 OP2 A A 317 16.952 123.940 23.171 1.00 40.49 O
ATOM 5 O5' A A 317 18.705 125.552 23.809 1.00 39.33 O
ATOM 6 C5' A A 317 19.891 125.790 24.599 1.00 37.08 C
ATOM 7 C4' A A 317 19.883 127.199 25.161 1.00 36.83 C
ATOM 8 O4' A A 317 19.799 128.154 24.066 1.00 38.30 O
ATOM 9 C3' A A 317 18.732 127.543 26.102 1.00 35.59 C
ATOM 10 O3' A A 317 19.128 128.583 27.005 1.00 35.80 O
ATOM 11 C2' A A 317 17.731 128.178 25.148 1.00 36.80 C
ATOM 12 O2' A A 317 16.822 129.038 25.801 1.00 36.90 O
ATOM 13 C1' A A 317 18.672 128.981 24.255 1.00 38.96 C
ATOM 14 N9 A A 317 18.138 129.362 22.951 1.00 42.76 N
ATOM 15 C8 A A 317 17.369 128.630 22.080 1.00 43.47 C
ATOM 16 N7 A A 317 17.042 129.278 20.989 1.00 45.08 N
ATOM 17 C5 A A 317 17.640 130.520 21.148 1.00 45.72 C
ATOM 18 C6 A A 317 17.673 131.665 20.335 1.00 45.64 C
ATOM 19 N6 A A 317 17.072 131.749 19.149 1.00 45.01 N
ATOM 20 N1 A A 317 18.358 132.736 20.789 1.00 47.07 N
ATOM 21 C2 A A 317 18.972 132.651 21.978 1.00 46.65 C
ATOM 22 N3 A A 317 19.017 131.631 22.830 1.00 46.42 N
ATOM 23 C4 A A 317 18.322 130.584 22.351 1.00 45.72 C
ATOM 24 P C A 318 19.962 128.244 28.338 1.00 35.99 P
ATOM 25 OP1 C A 318 19.950 129.500 29.128 1.00 30.48 O
ATOM 26 OP2 C A 318 21.262 127.621 27.952 1.00 30.01 O
ATOM 27 O5' C A 318 19.094 127.151 29.116 1.00 35.38 O
TER

ATOM 1 O3' U B 334 26.158 128.665 25.959 1.00 35.48 O
ATOM 2 P A B 335 26.665 128.242 24.496 1.00 36.48 P
ATOM 3 OP1 A B 335 27.620 127.116 24.638 1.00 36.28 O
ATOM 4 OP2 A B 335 27.093 129.469 23.781 1.00 39.17 O
ATOM 5 O5' A B 335 25.350 127.680 23.793 1.00 37.67 O
ATOM 6 C5' A B 335 24.752 126.443 24.226 1.00 36.30 C
ATOM 7 C4' A B 335 23.661 126.020 23.268 1.00 38.89 C
ATOM 8 O4' A B 335 22.571 126.982 23.295 1.00 39.48 O
ATOM 9 C3' A B 335 24.051 125.946 21.801 1.00 39.55 C
ATOM 10 O3' A B 335 24.721 124.729 21.488 1.00 41.28 O
ATOM 11 C2' A B 335 22.701 126.065 21.107 1.00 39.68 C
ATOM 12 O2' A B 335 21.969 124.857 21.121 1.00 40.17 O
ATOM 13 C1' A B 335 21.993 127.084 22.001 1.00 40.11 C
ATOM 14 N9 A B 335 22.152 128.463 21.530 1.00 42.14 N
ATOM 15 C8 A B 335 23.049 129.408 21.965 1.00 42.72 C
ATOM 16 N7 A B 335 22.942 130.561 21.355 1.00 43.79 N
ATOM 17 C5 A B 335 21.906 130.365 20.452 1.00 44.96 C
ATOM 18 C6 A B 335 21.301 131.211 19.502 1.00 44.25 C
ATOM 19 N6 A B 335 21.668 132.475 19.296 1.00 43.62 N
ATOM 20 N1 A B 335 20.293 130.704 18.762 1.00 44.45 N
ATOM 21 C2 A B 335 19.923 129.436 18.968 1.00 42.95 C
ATOM 22 N3 A B 335 20.409 128.546 19.824 1.00 44.27 N
ATOM 23 C4 A B 335 21.411 129.077 20.547 1.00 44.22 C
ATOM 24 P C B 336 25.850 124.716 20.345 1.00 43.02 P
ATOM 25 OP1 C B 336 26.309 123.315 20.161 1.00 40.23 O
ATOM 26 OP2 C B 336 26.840 125.775 20.658 1.00 44.42 O
ATOM 27 O5' C B 336 25.073 125.180 19.036 1.00 45.94 O
TER

Atoms:
OP1: (19.300,123.102,23.766)
OP2: (16.952,123.940,23.171)
C3': (18.732,127.543,26.102)
C1': (18.672,128.981,24.255)
C5': (19.891,125.790,24.599)
O4': (19.799,128.154,24.066)
C8: (17.369,128.630,22.080)
O2': (16.822,129.038,25.801)
C6: (17.673,131.665,20.335)
C5: (17.640,130.520,21.148)
C4: (18.322,130.584,22.351)
P: (18.421,124.126,23.147)
C4': (19.883,127.199,25.161)
C2': (17.731,128.178,25.148)
C2: (18.972,132.651,21.978)
N1: (18.358,132.736,20.789)
N3: (19.017,131.631,22.830)
N6: (17.072,131.749,19.149)
N7: (17.042,129.278,20.989)
N9: (18.138,129.362,22.951)
O5': (18.705,125.552,23.809)
O3': (19.128,128.583,27.005)
OP1: (27.620,127.116,24.638)
OP2: (27.093,129.469,23.781)
C3': (24.051,125.946,21.801)
C1': (21.993,127.084,22.001)
C5': (24.752,126.443,24.226)
O4': (22.571,126.982,23.295)
C8: (23.049,129.408,21.965)
O2': (21.969,124.857,21.121)
C6: (21.301,131.211,19.502)
C5: (21.906,130.365,20.452)
C4: (21.411,129.077,20.547)
P: (26.665,128.242,24.496)
C4': (23.661,126.020,23.268)
C2': (22.701,126.065,21.107)
C2: (19.923,129.436,18.968)
N1: (20.293,130.704,18.762)
N3: (20.409,128.546,19.824)
N6: (21.668,132.475,19.296)
N7: (22.942,130.561,21.355)
N9: (22.152,128.463,21.530)
O5': (25.350,127.680,23.793)
O3': (24.721,124.729,21.488)
Image (generated by PyMOL):
PyMOL image
show in jmol