Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M71:M102
Extra
PDB:
ATOM 1 O3' G A 70 -25.851 27.182 -57.742 1.00 79.01 O
ATOM 2 P A A 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 3 OP1 A A 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 4 OP2 A A 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 5 O5' A A 71 -27.011 29.353 -57.128 1.00 79.40 O
ATOM 6 C5' A A 71 -28.051 28.646 -56.519 1.00 78.18 C
ATOM 7 C4' A A 71 -27.986 28.823 -55.027 1.00 78.47 C
ATOM 8 O4' A A 71 -28.957 29.826 -54.636 1.00 78.67 O
ATOM 9 C3' A A 71 -28.286 27.547 -54.250 1.00 78.92 C
ATOM 10 O3' A A 71 -27.162 27.234 -53.403 1.00 81.08 O
ATOM 11 C2' A A 71 -29.480 27.886 -53.376 1.00 78.61 C
ATOM 12 O2' A A 71 -29.087 28.207 -52.055 1.00 84.02 O
ATOM 13 C1' A A 71 -29.981 29.227 -53.882 1.00 75.69 C
ATOM 14 N9 A A 71 -31.220 29.105 -54.610 1.00 73.78 N
ATOM 15 C8 A A 71 -31.611 28.165 -55.523 1.00 73.54 C
ATOM 16 N7 A A 71 -32.841 28.343 -55.971 1.00 73.94 N
ATOM 17 C5 A A 71 -33.262 29.468 -55.273 1.00 74.82 C
ATOM 18 C6 A A 71 -34.462 30.201 -55.264 1.00 75.51 C
ATOM 19 N6 A A 71 -35.496 29.875 -56.024 1.00 76.74 N
ATOM 20 N1 A A 71 -34.568 31.274 -54.454 1.00 76.19 N
ATOM 21 C2 A A 71 -33.515 31.599 -53.693 1.00 76.47 C
ATOM 22 N3 A A 71 -32.326 30.993 -53.603 1.00 75.53 N
ATOM 23 C4 A A 71 -32.274 29.935 -54.427 1.00 74.54 C
ATOM 24 P A A 72 -25.969 28.264 -53.015 1.00 81.23 P
ATOM 25 OP1 A A 72 -26.513 29.464 -52.306 1.00 77.08 O
ATOM 26 OP2 A A 72 -25.136 28.311 -54.238 1.00 82.86 O
ATOM 27 O5' A A 72 -25.123 27.419 -51.958 1.00 80.38 O
TER
ATOM 1 O3' U B 101 -39.597 27.143 -61.831 1.00 77.16 O
ATOM 2 P A B 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 3 OP1 A B 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 4 OP2 A B 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 5 O5' A B 102 -37.894 28.676 -62.501 1.00 75.80 O
ATOM 6 C5' A B 102 -38.691 29.819 -62.142 1.00 79.65 C
ATOM 7 C4' A B 102 -37.798 30.858 -61.524 1.00 80.50 C
ATOM 8 O4' A B 102 -37.077 30.187 -60.476 1.00 77.97 O
ATOM 9 C3' A B 102 -36.653 31.264 -62.432 1.00 81.54 C
ATOM 10 O3' A B 102 -37.055 32.219 -63.389 1.00 85.60 O
ATOM 11 C2' A B 102 -35.594 31.772 -61.468 1.00 79.20 C
ATOM 12 O2' A B 102 -35.809 33.101 -61.071 1.00 83.03 O
ATOM 13 C1' A B 102 -35.821 30.832 -60.294 1.00 75.27 C
ATOM 14 N9 A B 102 -34.778 29.823 -60.213 1.00 71.77 N
ATOM 15 C8 A B 102 -34.780 28.591 -60.792 1.00 70.49 C
ATOM 16 N7 A B 102 -33.703 27.880 -60.547 1.00 69.13 N
ATOM 17 C5 A B 102 -32.955 28.714 -59.756 1.00 68.87 C
ATOM 18 C6 A B 102 -31.701 28.537 -59.180 1.00 68.30 C
ATOM 19 N6 A B 102 -31.018 27.416 -59.340 1.00 67.89 N
ATOM 20 N1 A B 102 -31.203 29.548 -58.444 1.00 69.71 N
ATOM 21 C2 A B 102 -31.938 30.672 -58.296 1.00 71.27 C
ATOM 22 N3 A B 102 -33.145 30.967 -58.792 1.00 71.62 N
ATOM 23 C4 A B 102 -33.594 29.923 -59.527 1.00 70.99 C
ATOM 24 P G B 103 -36.294 32.128 -64.785 1.00 88.35 P
ATOM 25 OP1 G B 103 -36.913 33.159 -65.666 1.00 91.64 O
ATOM 26 OP2 G B 103 -36.136 30.717 -65.270 1.00 84.96 O
ATOM 27 O5' G B 103 -34.857 32.594 -64.302 1.00 84.85 O
TER
ATOM 2 P A A 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 3 OP1 A A 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 4 OP2 A A 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 5 O5' A A 71 -27.011 29.353 -57.128 1.00 79.40 O
ATOM 6 C5' A A 71 -28.051 28.646 -56.519 1.00 78.18 C
ATOM 7 C4' A A 71 -27.986 28.823 -55.027 1.00 78.47 C
ATOM 8 O4' A A 71 -28.957 29.826 -54.636 1.00 78.67 O
ATOM 9 C3' A A 71 -28.286 27.547 -54.250 1.00 78.92 C
ATOM 10 O3' A A 71 -27.162 27.234 -53.403 1.00 81.08 O
ATOM 11 C2' A A 71 -29.480 27.886 -53.376 1.00 78.61 C
ATOM 12 O2' A A 71 -29.087 28.207 -52.055 1.00 84.02 O
ATOM 13 C1' A A 71 -29.981 29.227 -53.882 1.00 75.69 C
ATOM 14 N9 A A 71 -31.220 29.105 -54.610 1.00 73.78 N
ATOM 15 C8 A A 71 -31.611 28.165 -55.523 1.00 73.54 C
ATOM 16 N7 A A 71 -32.841 28.343 -55.971 1.00 73.94 N
ATOM 17 C5 A A 71 -33.262 29.468 -55.273 1.00 74.82 C
ATOM 18 C6 A A 71 -34.462 30.201 -55.264 1.00 75.51 C
ATOM 19 N6 A A 71 -35.496 29.875 -56.024 1.00 76.74 N
ATOM 20 N1 A A 71 -34.568 31.274 -54.454 1.00 76.19 N
ATOM 21 C2 A A 71 -33.515 31.599 -53.693 1.00 76.47 C
ATOM 22 N3 A A 71 -32.326 30.993 -53.603 1.00 75.53 N
ATOM 23 C4 A A 71 -32.274 29.935 -54.427 1.00 74.54 C
ATOM 24 P A A 72 -25.969 28.264 -53.015 1.00 81.23 P
ATOM 25 OP1 A A 72 -26.513 29.464 -52.306 1.00 77.08 O
ATOM 26 OP2 A A 72 -25.136 28.311 -54.238 1.00 82.86 O
ATOM 27 O5' A A 72 -25.123 27.419 -51.958 1.00 80.38 O
TER
ATOM 1 O3' U B 101 -39.597 27.143 -61.831 1.00 77.16 O
ATOM 2 P A B 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 3 OP1 A B 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 4 OP2 A B 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 5 O5' A B 102 -37.894 28.676 -62.501 1.00 75.80 O
ATOM 6 C5' A B 102 -38.691 29.819 -62.142 1.00 79.65 C
ATOM 7 C4' A B 102 -37.798 30.858 -61.524 1.00 80.50 C
ATOM 8 O4' A B 102 -37.077 30.187 -60.476 1.00 77.97 O
ATOM 9 C3' A B 102 -36.653 31.264 -62.432 1.00 81.54 C
ATOM 10 O3' A B 102 -37.055 32.219 -63.389 1.00 85.60 O
ATOM 11 C2' A B 102 -35.594 31.772 -61.468 1.00 79.20 C
ATOM 12 O2' A B 102 -35.809 33.101 -61.071 1.00 83.03 O
ATOM 13 C1' A B 102 -35.821 30.832 -60.294 1.00 75.27 C
ATOM 14 N9 A B 102 -34.778 29.823 -60.213 1.00 71.77 N
ATOM 15 C8 A B 102 -34.780 28.591 -60.792 1.00 70.49 C
ATOM 16 N7 A B 102 -33.703 27.880 -60.547 1.00 69.13 N
ATOM 17 C5 A B 102 -32.955 28.714 -59.756 1.00 68.87 C
ATOM 18 C6 A B 102 -31.701 28.537 -59.180 1.00 68.30 C
ATOM 19 N6 A B 102 -31.018 27.416 -59.340 1.00 67.89 N
ATOM 20 N1 A B 102 -31.203 29.548 -58.444 1.00 69.71 N
ATOM 21 C2 A B 102 -31.938 30.672 -58.296 1.00 71.27 C
ATOM 22 N3 A B 102 -33.145 30.967 -58.792 1.00 71.62 N
ATOM 23 C4 A B 102 -33.594 29.923 -59.527 1.00 70.99 C
ATOM 24 P G B 103 -36.294 32.128 -64.785 1.00 88.35 P
ATOM 25 OP1 G B 103 -36.913 33.159 -65.666 1.00 91.64 O
ATOM 26 OP2 G B 103 -36.136 30.717 -65.270 1.00 84.96 O
ATOM 27 O5' G B 103 -34.857 32.594 -64.302 1.00 84.85 O
TER
Atoms:
OP1: (-26.984,28.689,-59.526)
OP2: (-24.846,29.331,-58.176)
C3': (-28.286,27.547,-54.250)
C1': (-29.981,29.227,-53.882)
C5': (-28.051,28.646,-56.519)
O4': (-28.957,29.826,-54.636)
C8: (-31.611,28.165,-55.523)
O2': (-29.087,28.207,-52.055)
C6: (-34.462,30.201,-55.264)
C5: (-33.262,29.468,-55.273)
C4: (-32.274,29.935,-54.427)
P: (-26.161,28.671,-58.296)
C4': (-27.986,28.823,-55.027)
C2': (-29.480,27.886,-53.376)
C2: (-33.515,31.599,-53.693)
N1: (-34.568,31.274,-54.454)
N3: (-32.326,30.993,-53.603)
N6: (-35.496,29.875,-56.024)
N7: (-32.841,28.343,-55.971)
N9: (-31.220,29.105,-54.610)
O5': (-27.011,29.353,-57.128)
O3': (-27.162,27.234,-53.403)
OP2: (-24.846,29.331,-58.176)
C3': (-28.286,27.547,-54.250)
C1': (-29.981,29.227,-53.882)
C5': (-28.051,28.646,-56.519)
O4': (-28.957,29.826,-54.636)
C8: (-31.611,28.165,-55.523)
O2': (-29.087,28.207,-52.055)
C6: (-34.462,30.201,-55.264)
C5: (-33.262,29.468,-55.273)
C4: (-32.274,29.935,-54.427)
P: (-26.161,28.671,-58.296)
C4': (-27.986,28.823,-55.027)
C2': (-29.480,27.886,-53.376)
C2: (-33.515,31.599,-53.693)
N1: (-34.568,31.274,-54.454)
N3: (-32.326,30.993,-53.603)
N6: (-35.496,29.875,-56.024)
N7: (-32.841,28.343,-55.971)
N9: (-31.220,29.105,-54.610)
O5': (-27.011,29.353,-57.128)
O3': (-27.162,27.234,-53.403)
OP1: (-39.555,27.898,-64.202)
OP2: (-37.838,26.220,-63.301)
C3': (-36.653,31.264,-62.432)
C1': (-35.821,30.832,-60.294)
C5': (-38.691,29.819,-62.142)
O4': (-37.077,30.187,-60.476)
C8: (-34.780,28.591,-60.792)
O2': (-35.809,33.101,-61.071)
C6: (-31.701,28.537,-59.180)
C5: (-32.955,28.714,-59.756)
C4: (-33.594,29.923,-59.527)
P: (-38.693,27.423,-63.086)
C4': (-37.798,30.858,-61.524)
C2': (-35.594,31.772,-61.468)
C2: (-31.938,30.672,-58.296)
N1: (-31.203,29.548,-58.444)
N3: (-33.145,30.967,-58.792)
N6: (-31.018,27.416,-59.340)
N7: (-33.703,27.880,-60.547)
N9: (-34.778,29.823,-60.213)
O5': (-37.894,28.676,-62.501)
O3': (-37.055,32.219,-63.389)
OP2: (-37.838,26.220,-63.301)
C3': (-36.653,31.264,-62.432)
C1': (-35.821,30.832,-60.294)
C5': (-38.691,29.819,-62.142)
O4': (-37.077,30.187,-60.476)
C8: (-34.780,28.591,-60.792)
O2': (-35.809,33.101,-61.071)
C6: (-31.701,28.537,-59.180)
C5: (-32.955,28.714,-59.756)
C4: (-33.594,29.923,-59.527)
P: (-38.693,27.423,-63.086)
C4': (-37.798,30.858,-61.524)
C2': (-35.594,31.772,-61.468)
C2: (-31.938,30.672,-58.296)
N1: (-31.203,29.548,-58.444)
N3: (-33.145,30.967,-58.792)
N6: (-31.018,27.416,-59.340)
N7: (-33.703,27.880,-60.547)
N9: (-34.778,29.823,-60.213)
O5': (-37.894,28.676,-62.501)
O3': (-37.055,32.219,-63.389)
Image (generated by PyMOL):