ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A363:A461

Extra

PDB:
ATOM 1 O3' C A 362 -9.094 18.809 106.054 1.00 83.57 O
ATOM 2 P A A 363 -9.329 17.237 105.929 1.00 61.93 P
ATOM 3 OP1 A A 363 -10.650 16.919 106.531 1.00 48.63 O
ATOM 4 OP2 A A 363 -8.119 16.544 106.424 1.00 36.97 O
ATOM 5 O5' A A 363 -9.388 17.114 104.332 1.00 53.77 O
ATOM 6 C5' A A 363 -9.840 15.942 103.691 1.00 58.29 C
ATOM 7 C4' A A 363 -10.230 16.253 102.256 1.00 49.11 C
ATOM 8 O4' A A 363 -11.627 16.635 102.180 1.00 51.52 O
ATOM 9 C3' A A 363 -9.467 17.413 101.640 1.00 44.96 C
ATOM 10 O3' A A 363 -8.293 16.965 101.008 1.00 42.37 O
ATOM 11 C2' A A 363 -10.442 17.956 100.602 1.00 50.46 C
ATOM 12 O2' A A 363 -10.353 17.289 99.365 1.00 55.68 O
ATOM 13 C1' A A 363 -11.794 17.683 101.242 1.00 54.41 C
ATOM 14 N9 A A 363 -12.278 18.868 101.935 1.00 55.12 N
ATOM 15 C8 A A 363 -12.603 18.988 103.260 1.00 49.61 C
ATOM 16 N7 A A 363 -12.998 20.193 103.590 1.00 40.52 N
ATOM 17 C5 A A 363 -12.923 20.912 102.404 1.00 45.04 C
ATOM 18 C6 A A 363 -13.213 22.253 102.084 1.00 47.50 C
ATOM 19 N6 A A 363 -13.655 23.126 102.986 1.00 51.71 N
ATOM 20 N1 A A 363 -13.030 22.656 100.809 1.00 48.82 N
ATOM 21 C2 A A 363 -12.584 21.763 99.916 1.00 51.07 C
ATOM 22 N3 A A 363 -12.281 20.472 100.090 1.00 47.04 N
ATOM 23 C4 A A 363 -12.476 20.109 101.371 1.00 50.61 C
ATOM 24 P A A 364 -7.077 17.998 100.906 1.00 55.77 P
ATOM 25 OP1 A A 364 -5.854 17.275 100.460 1.00 66.24 O
ATOM 26 OP2 A A 364 -7.092 18.728 102.200 1.00 67.70 O
ATOM 27 O5' A A 364 -7.514 18.997 99.730 1.00 49.21 O
TER

ATOM 1 O3' G B 460 -16.888 14.913 102.144 1.00 53.56 O
ATOM 2 P A B 461 -17.395 14.842 103.662 1.00 82.27 P
ATOM 3 OP1 A B 461 -16.265 14.342 104.473 1.00 65.91 O
ATOM 4 OP2 A B 461 -18.722 14.171 103.718 1.00 67.32 O
ATOM 5 O5' A B 461 -17.645 16.382 103.999 1.00 90.92 O
ATOM 6 C5' A B 461 -17.916 16.821 105.321 1.00 71.63 C
ATOM 7 C4' A B 461 -18.054 18.327 105.293 1.00 63.86 C
ATOM 8 O4' A B 461 -16.785 18.914 104.903 1.00 55.41 O
ATOM 9 C3' A B 461 -19.083 18.808 104.275 1.00 67.21 C
ATOM 10 O3' A B 461 -20.349 18.989 104.903 1.00 62.22 O
ATOM 11 C2' A B 461 -18.503 20.128 103.756 1.00 69.66 C
ATOM 12 O2' A B 461 -18.987 21.288 104.421 1.00 72.43 O
ATOM 13 C1' A B 461 -16.994 19.953 103.962 1.00 68.26 C
ATOM 14 N9 A B 461 -16.328 19.615 102.709 1.00 66.05 N
ATOM 15 C8 A B 461 -15.668 18.462 102.410 1.00 67.10 C
ATOM 16 N7 A B 461 -15.174 18.444 101.195 1.00 72.54 N
ATOM 17 C5 A B 461 -15.541 19.665 100.658 1.00 64.59 C
ATOM 18 C6 A B 461 -15.322 20.253 99.401 1.00 63.17 C
ATOM 19 N6 A B 461 -14.646 19.654 98.419 1.00 74.92 N
ATOM 20 N1 A B 461 -15.821 21.483 99.187 1.00 53.72 N
ATOM 21 C2 A B 461 -16.488 22.074 100.178 1.00 59.19 C
ATOM 22 N3 A B 461 -16.757 21.626 101.401 1.00 58.67 N
ATOM 23 C4 A B 461 -16.253 20.400 101.579 1.00 61.65 C
ATOM 24 P C B 462 -21.642 18.329 104.257 1.00 56.53 P
ATOM 25 OP1 C B 462 -22.766 18.532 105.198 1.00 57.88 O
ATOM 26 OP2 C B 462 -21.265 16.959 103.836 1.00 83.84 O
ATOM 27 O5' C B 462 -21.903 19.207 102.951 1.00 65.90 O
TER

Atoms:
OP1: (-10.650,16.919,106.531)
OP2: (-8.119,16.544,106.424)
C3': (-9.467,17.413,101.640)
C1': (-11.794,17.683,101.242)
C5': (-9.840,15.942,103.691)
O4': (-11.627,16.635,102.180)
C8: (-12.603,18.988,103.260)
O2': (-10.353,17.289,99.365)
C6: (-13.213,22.253,102.084)
C5: (-12.923,20.912,102.404)
C4: (-12.476,20.109,101.371)
P: (-9.329,17.237,105.929)
C4': (-10.230,16.253,102.256)
C2': (-10.442,17.956,100.602)
C2: (-12.584,21.763,99.916)
N1: (-13.030,22.656,100.809)
N3: (-12.281,20.472,100.090)
N6: (-13.655,23.126,102.986)
N7: (-12.998,20.193,103.590)
N9: (-12.278,18.868,101.935)
O5': (-9.388,17.114,104.332)
O3': (-8.293,16.965,101.008)
OP1: (-16.265,14.342,104.473)
OP2: (-18.722,14.171,103.718)
C3': (-19.083,18.808,104.275)
C1': (-16.994,19.953,103.962)
C5': (-17.916,16.821,105.321)
O4': (-16.785,18.914,104.903)
C8: (-15.668,18.462,102.410)
O2': (-18.987,21.288,104.421)
C6: (-15.322,20.253,99.401)
C5: (-15.541,19.665,100.658)
C4: (-16.253,20.400,101.579)
P: (-17.395,14.842,103.662)
C4': (-18.054,18.327,105.293)
C2': (-18.503,20.128,103.756)
C2: (-16.488,22.074,100.178)
N1: (-15.821,21.483,99.187)
N3: (-16.757,21.626,101.401)
N6: (-14.646,19.654,98.419)
N7: (-15.174,18.444,101.195)
N9: (-16.328,19.615,102.709)
O5': (-17.645,16.382,103.999)
O3': (-20.349,18.989,104.903)
Image (generated by PyMOL):
PyMOL image
show in jmol