Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1840:A1921
Extra
PDB:
ATOM 1 O3' C A1839 -89.512 0.178 16.472 1.00 39.96 O
ATOM 2 P C A1840 -89.002 0.203 17.979 1.00 50.34 P
ATOM 3 OP1 C A1840 -89.488 1.422 18.692 1.00 63.22 O
ATOM 4 OP2 C A1840 -87.546 -0.080 17.896 1.00 56.41 O
ATOM 5 O5' C A1840 -89.784 -1.050 18.586 1.00 42.72 O
ATOM 6 C5' C A1840 -91.185 -1.158 18.364 1.00 48.41 C
ATOM 7 C4' C A1840 -91.675 -2.468 18.933 1.00 56.64 C
ATOM 8 O4' C A1840 -91.147 -3.536 18.122 1.00 56.12 O
ATOM 9 C3' C A1840 -91.139 -2.735 20.327 1.00 55.23 C
ATOM 10 O3' C A1840 -92.053 -2.224 21.259 1.00 57.57 O
ATOM 11 C2' C A1840 -91.066 -4.251 20.403 1.00 52.13 C
ATOM 12 O2' C A1840 -92.273 -4.808 20.871 1.00 59.31 O
ATOM 13 C1' C A1840 -90.848 -4.648 18.946 1.00 55.74 C
ATOM 14 N1 C A1840 -89.454 -5.052 18.699 1.00 52.55 N
ATOM 15 C2 C A1840 -89.076 -6.366 18.954 1.00 56.49 C
ATOM 16 O2 C A1840 -89.911 -7.165 19.375 1.00 52.48 O
ATOM 17 N3 C A1840 -87.798 -6.719 18.730 1.00 60.26 N
ATOM 18 C4 C A1840 -86.931 -5.815 18.274 1.00 52.36 C
ATOM 19 N4 C A1840 -85.672 -6.200 18.068 1.00 56.71 N
ATOM 20 C5 C A1840 -87.300 -4.473 18.007 1.00 52.27 C
ATOM 21 C6 C A1840 -88.567 -4.134 18.234 1.00 52.51 C
ATOM 22 P C A1841 -91.475 -1.247 22.371 1.00 65.52 P
ATOM 23 OP1 C A1841 -92.588 -0.519 23.035 1.00 62.62 O
ATOM 24 OP2 C A1841 -90.367 -0.503 21.718 1.00 51.19 O
ATOM 25 O5' C A1841 -90.886 -2.293 23.422 1.00 60.23 O
TER
ATOM 1 O3' U B1920 -100.716 -7.604 21.703 1.00 75.40 O
ATOM 2 P A B1921 -100.404 -6.755 23.021 1.00 86.06 P
ATOM 3 OP1 A B1921 -99.594 -7.609 23.915 1.00 73.54 O
ATOM 4 OP2 A B1921 -101.668 -6.189 23.535 1.00 79.10 O
ATOM 5 O5' A B1921 -99.483 -5.574 22.441 1.00 69.48 O
ATOM 6 C5' A B1921 -98.878 -4.640 23.330 1.00 61.84 C
ATOM 7 C4' A B1921 -97.469 -4.285 22.897 1.00 61.43 C
ATOM 8 O4' A B1921 -96.542 -5.299 23.353 1.00 59.55 O
ATOM 9 C3' A B1921 -97.273 -4.180 21.396 1.00 67.23 C
ATOM 10 O3' A B1921 -97.467 -2.835 21.011 1.00 68.16 O
ATOM 11 C2' A B1921 -95.814 -4.589 21.210 1.00 67.24 C
ATOM 12 O2' A B1921 -94.920 -3.494 21.289 1.00 56.98 O
ATOM 13 C1' A B1921 -95.566 -5.554 22.366 1.00 65.22 C
ATOM 14 N9 A B1921 -95.674 -6.951 21.961 1.00 71.08 N
ATOM 15 C8 A B1921 -96.614 -7.855 22.359 1.00 75.46 C
ATOM 16 N7 A B1921 -96.471 -9.044 21.821 1.00 73.64 N
ATOM 17 C5 A B1921 -95.363 -8.909 21.008 1.00 62.67 C
ATOM 18 C6 A B1921 -94.692 -9.811 20.165 1.00 61.92 C
ATOM 19 N6 A B1921 -95.058 -11.079 20.001 1.00 71.72 N
ATOM 20 N1 A B1921 -93.624 -9.365 19.491 1.00 60.26 N
ATOM 21 C2 A B1921 -93.260 -8.093 19.664 1.00 66.69 C
ATOM 22 N3 A B1921 -93.806 -7.150 20.427 1.00 67.61 N
ATOM 23 C4 A B1921 -94.864 -7.628 21.082 1.00 65.16 C
ATOM 24 P A B1922 -98.512 -2.467 19.869 1.00 54.11 P
ATOM 25 OP1 A B1922 -98.871 -1.055 20.103 1.00 73.52 O
ATOM 26 OP2 A B1922 -99.548 -3.521 19.867 1.00 70.54 O
ATOM 27 O5' A B1922 -97.681 -2.576 18.512 1.00 47.70 O
TER
ATOM 2 P C A1840 -89.002 0.203 17.979 1.00 50.34 P
ATOM 3 OP1 C A1840 -89.488 1.422 18.692 1.00 63.22 O
ATOM 4 OP2 C A1840 -87.546 -0.080 17.896 1.00 56.41 O
ATOM 5 O5' C A1840 -89.784 -1.050 18.586 1.00 42.72 O
ATOM 6 C5' C A1840 -91.185 -1.158 18.364 1.00 48.41 C
ATOM 7 C4' C A1840 -91.675 -2.468 18.933 1.00 56.64 C
ATOM 8 O4' C A1840 -91.147 -3.536 18.122 1.00 56.12 O
ATOM 9 C3' C A1840 -91.139 -2.735 20.327 1.00 55.23 C
ATOM 10 O3' C A1840 -92.053 -2.224 21.259 1.00 57.57 O
ATOM 11 C2' C A1840 -91.066 -4.251 20.403 1.00 52.13 C
ATOM 12 O2' C A1840 -92.273 -4.808 20.871 1.00 59.31 O
ATOM 13 C1' C A1840 -90.848 -4.648 18.946 1.00 55.74 C
ATOM 14 N1 C A1840 -89.454 -5.052 18.699 1.00 52.55 N
ATOM 15 C2 C A1840 -89.076 -6.366 18.954 1.00 56.49 C
ATOM 16 O2 C A1840 -89.911 -7.165 19.375 1.00 52.48 O
ATOM 17 N3 C A1840 -87.798 -6.719 18.730 1.00 60.26 N
ATOM 18 C4 C A1840 -86.931 -5.815 18.274 1.00 52.36 C
ATOM 19 N4 C A1840 -85.672 -6.200 18.068 1.00 56.71 N
ATOM 20 C5 C A1840 -87.300 -4.473 18.007 1.00 52.27 C
ATOM 21 C6 C A1840 -88.567 -4.134 18.234 1.00 52.51 C
ATOM 22 P C A1841 -91.475 -1.247 22.371 1.00 65.52 P
ATOM 23 OP1 C A1841 -92.588 -0.519 23.035 1.00 62.62 O
ATOM 24 OP2 C A1841 -90.367 -0.503 21.718 1.00 51.19 O
ATOM 25 O5' C A1841 -90.886 -2.293 23.422 1.00 60.23 O
TER
ATOM 1 O3' U B1920 -100.716 -7.604 21.703 1.00 75.40 O
ATOM 2 P A B1921 -100.404 -6.755 23.021 1.00 86.06 P
ATOM 3 OP1 A B1921 -99.594 -7.609 23.915 1.00 73.54 O
ATOM 4 OP2 A B1921 -101.668 -6.189 23.535 1.00 79.10 O
ATOM 5 O5' A B1921 -99.483 -5.574 22.441 1.00 69.48 O
ATOM 6 C5' A B1921 -98.878 -4.640 23.330 1.00 61.84 C
ATOM 7 C4' A B1921 -97.469 -4.285 22.897 1.00 61.43 C
ATOM 8 O4' A B1921 -96.542 -5.299 23.353 1.00 59.55 O
ATOM 9 C3' A B1921 -97.273 -4.180 21.396 1.00 67.23 C
ATOM 10 O3' A B1921 -97.467 -2.835 21.011 1.00 68.16 O
ATOM 11 C2' A B1921 -95.814 -4.589 21.210 1.00 67.24 C
ATOM 12 O2' A B1921 -94.920 -3.494 21.289 1.00 56.98 O
ATOM 13 C1' A B1921 -95.566 -5.554 22.366 1.00 65.22 C
ATOM 14 N9 A B1921 -95.674 -6.951 21.961 1.00 71.08 N
ATOM 15 C8 A B1921 -96.614 -7.855 22.359 1.00 75.46 C
ATOM 16 N7 A B1921 -96.471 -9.044 21.821 1.00 73.64 N
ATOM 17 C5 A B1921 -95.363 -8.909 21.008 1.00 62.67 C
ATOM 18 C6 A B1921 -94.692 -9.811 20.165 1.00 61.92 C
ATOM 19 N6 A B1921 -95.058 -11.079 20.001 1.00 71.72 N
ATOM 20 N1 A B1921 -93.624 -9.365 19.491 1.00 60.26 N
ATOM 21 C2 A B1921 -93.260 -8.093 19.664 1.00 66.69 C
ATOM 22 N3 A B1921 -93.806 -7.150 20.427 1.00 67.61 N
ATOM 23 C4 A B1921 -94.864 -7.628 21.082 1.00 65.16 C
ATOM 24 P A B1922 -98.512 -2.467 19.869 1.00 54.11 P
ATOM 25 OP1 A B1922 -98.871 -1.055 20.103 1.00 73.52 O
ATOM 26 OP2 A B1922 -99.548 -3.521 19.867 1.00 70.54 O
ATOM 27 O5' A B1922 -97.681 -2.576 18.512 1.00 47.70 O
TER
Atoms:
C2: (-89.076,-6.366,18.954)
OP1: (-89.488,1.422,18.692)
OP2: (-87.546,-0.080,17.896)
C4: (-86.931,-5.815,18.274)
O5': (-89.784,-1.050,18.586)
C3': (-91.139,-2.735,20.327)
C1': (-90.848,-4.648,18.946)
O4': (-91.147,-3.536,18.122)
C5': (-91.185,-1.158,18.364)
P: (-89.002,0.203,17.979)
O2: (-89.911,-7.165,19.375)
C4': (-91.675,-2.468,18.933)
C2': (-91.066,-4.251,20.403)
O2': (-92.273,-4.808,20.871)
N1: (-89.454,-5.052,18.699)
N3: (-87.798,-6.719,18.730)
N4: (-85.672,-6.200,18.068)
C6: (-88.567,-4.134,18.234)
C5: (-87.300,-4.473,18.007)
O3': (-92.053,-2.224,21.259)
OP1: (-89.488,1.422,18.692)
OP2: (-87.546,-0.080,17.896)
C4: (-86.931,-5.815,18.274)
O5': (-89.784,-1.050,18.586)
C3': (-91.139,-2.735,20.327)
C1': (-90.848,-4.648,18.946)
O4': (-91.147,-3.536,18.122)
C5': (-91.185,-1.158,18.364)
P: (-89.002,0.203,17.979)
O2: (-89.911,-7.165,19.375)
C4': (-91.675,-2.468,18.933)
C2': (-91.066,-4.251,20.403)
O2': (-92.273,-4.808,20.871)
N1: (-89.454,-5.052,18.699)
N3: (-87.798,-6.719,18.730)
N4: (-85.672,-6.200,18.068)
C6: (-88.567,-4.134,18.234)
C5: (-87.300,-4.473,18.007)
O3': (-92.053,-2.224,21.259)
OP1: (-99.594,-7.609,23.915)
OP2: (-101.668,-6.189,23.535)
C3': (-97.273,-4.180,21.396)
C1': (-95.566,-5.554,22.366)
C5': (-98.878,-4.640,23.330)
O4': (-96.542,-5.299,23.353)
C8: (-96.614,-7.855,22.359)
O2': (-94.920,-3.494,21.289)
C6: (-94.692,-9.811,20.165)
C5: (-95.363,-8.909,21.008)
C4: (-94.864,-7.628,21.082)
P: (-100.404,-6.755,23.021)
C4': (-97.469,-4.285,22.897)
C2': (-95.814,-4.589,21.210)
C2: (-93.260,-8.093,19.664)
N1: (-93.624,-9.365,19.491)
N3: (-93.806,-7.150,20.427)
N6: (-95.058,-11.079,20.001)
N7: (-96.471,-9.044,21.821)
N9: (-95.674,-6.951,21.961)
O5': (-99.483,-5.574,22.441)
O3': (-97.467,-2.835,21.011)
OP2: (-101.668,-6.189,23.535)
C3': (-97.273,-4.180,21.396)
C1': (-95.566,-5.554,22.366)
C5': (-98.878,-4.640,23.330)
O4': (-96.542,-5.299,23.353)
C8: (-96.614,-7.855,22.359)
O2': (-94.920,-3.494,21.289)
C6: (-94.692,-9.811,20.165)
C5: (-95.363,-8.909,21.008)
C4: (-94.864,-7.628,21.082)
P: (-100.404,-6.755,23.021)
C4': (-97.469,-4.285,22.897)
C2': (-95.814,-4.589,21.210)
C2: (-93.260,-8.093,19.664)
N1: (-93.624,-9.365,19.491)
N3: (-93.806,-7.150,20.427)
N6: (-95.058,-11.079,20.001)
N7: (-96.471,-9.044,21.821)
N9: (-95.674,-6.951,21.961)
O5': (-99.483,-5.574,22.441)
O3': (-97.467,-2.835,21.011)
Image (generated by PyMOL):