Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A439:A443
Extra
PDB:
ATOM 1 O3' C A 438 36.127 121.692 51.833 1.00 37.28 O
ATOM 2 P C A 439 35.148 122.691 52.606 1.00 37.78 P
ATOM 3 OP1 C A 439 34.814 122.059 53.886 1.00 36.80 O
ATOM 4 OP2 C A 439 34.053 123.084 51.671 1.00 39.54 O
ATOM 5 O5' C A 439 36.062 123.960 52.922 1.00 36.79 O
ATOM 6 C5' C A 439 37.139 123.876 53.881 1.00 36.07 C
ATOM 7 C4' C A 439 37.827 125.197 54.011 1.00 33.02 C
ATOM 8 O4' C A 439 38.287 125.621 52.721 1.00 34.60 O
ATOM 9 C3' C A 439 36.904 126.321 54.384 1.00 31.96 C
ATOM 10 O3' C A 439 36.613 126.259 55.757 1.00 27.76 O
ATOM 11 C2' C A 439 37.689 127.557 53.956 1.00 33.58 C
ATOM 12 O2' C A 439 38.706 127.975 54.829 1.00 34.89 O
ATOM 13 C1' C A 439 38.382 127.033 52.708 1.00 34.96 C
ATOM 14 N1 C A 439 37.815 127.544 51.457 1.00 37.17 N
ATOM 15 C2 C A 439 38.248 128.777 50.998 1.00 36.16 C
ATOM 16 O2 C A 439 39.028 129.430 51.696 1.00 33.59 O
ATOM 17 N3 C A 439 37.797 129.227 49.815 1.00 36.49 N
ATOM 18 C4 C A 439 36.926 128.503 49.108 1.00 37.11 C
ATOM 19 N4 C A 439 36.517 128.992 47.939 1.00 36.82 N
ATOM 20 C5 C A 439 36.438 127.255 49.568 1.00 36.69 C
ATOM 21 C6 C A 439 36.899 126.819 50.741 1.00 37.34 C
ATOM 22 P G A 440 35.202 126.761 56.249 1.00 27.27 P
ATOM 23 OP1 G A 440 35.195 126.678 57.718 1.00 25.94 O
ATOM 24 OP2 G A 440 34.191 126.012 55.459 1.00 29.11 O
ATOM 25 O5' G A 440 35.212 128.296 55.829 1.00 26.42 O
TER
ATOM 1 O3' U B 442 42.915 131.249 62.465 1.00 29.62 O
ATOM 2 P A B 443 43.751 130.610 61.249 1.00 30.75 P
ATOM 3 OP1 A B 443 44.597 129.548 61.837 1.00 28.11 O
ATOM 4 OP2 A B 443 44.381 131.688 60.439 1.00 29.31 O
ATOM 5 O5' A B 443 42.646 129.934 60.334 1.00 31.26 O
ATOM 6 C5' A B 443 41.785 128.893 60.827 1.00 33.87 C
ATOM 7 C4' A B 443 40.892 128.419 59.716 1.00 34.49 C
ATOM 8 O4' A B 443 39.915 129.439 59.405 1.00 35.67 O
ATOM 9 C3' A B 443 41.629 128.203 58.412 1.00 33.83 C
ATOM 10 O3' A B 443 42.183 126.914 58.400 1.00 31.47 O
ATOM 11 C2' A B 443 40.517 128.335 57.394 1.00 35.06 C
ATOM 12 O2' A B 443 39.747 127.154 57.390 1.00 35.92 O
ATOM 13 C1' A B 443 39.690 129.468 58.007 1.00 36.24 C
ATOM 14 N9 A B 443 39.996 130.820 57.531 1.00 37.83 N
ATOM 15 C8 A B 443 40.577 131.840 58.243 1.00 39.44 C
ATOM 16 N7 A B 443 40.679 132.966 57.577 1.00 40.55 N
ATOM 17 C5 A B 443 40.147 132.665 56.334 1.00 40.64 C
ATOM 18 C6 A B 443 39.972 133.432 55.170 1.00 40.62 C
ATOM 19 N6 A B 443 40.331 134.710 55.057 1.00 39.37 N
ATOM 20 N1 A B 443 39.405 132.828 54.108 1.00 41.76 N
ATOM 21 C2 A B 443 39.048 131.542 54.210 1.00 42.24 C
ATOM 22 N3 A B 443 39.164 130.714 55.240 1.00 40.67 N
ATOM 23 C4 A B 443 39.726 131.342 56.288 1.00 40.01 C
ATOM 24 P G B 444 43.601 126.679 57.738 1.00 30.38 P
ATOM 25 OP1 G B 444 43.850 125.225 57.907 1.00 29.84 O
ATOM 26 OP2 G B 444 44.515 127.638 58.356 1.00 31.22 O
ATOM 27 O5' G B 444 43.411 127.141 56.220 1.00 30.39 O
TER
ATOM 2 P C A 439 35.148 122.691 52.606 1.00 37.78 P
ATOM 3 OP1 C A 439 34.814 122.059 53.886 1.00 36.80 O
ATOM 4 OP2 C A 439 34.053 123.084 51.671 1.00 39.54 O
ATOM 5 O5' C A 439 36.062 123.960 52.922 1.00 36.79 O
ATOM 6 C5' C A 439 37.139 123.876 53.881 1.00 36.07 C
ATOM 7 C4' C A 439 37.827 125.197 54.011 1.00 33.02 C
ATOM 8 O4' C A 439 38.287 125.621 52.721 1.00 34.60 O
ATOM 9 C3' C A 439 36.904 126.321 54.384 1.00 31.96 C
ATOM 10 O3' C A 439 36.613 126.259 55.757 1.00 27.76 O
ATOM 11 C2' C A 439 37.689 127.557 53.956 1.00 33.58 C
ATOM 12 O2' C A 439 38.706 127.975 54.829 1.00 34.89 O
ATOM 13 C1' C A 439 38.382 127.033 52.708 1.00 34.96 C
ATOM 14 N1 C A 439 37.815 127.544 51.457 1.00 37.17 N
ATOM 15 C2 C A 439 38.248 128.777 50.998 1.00 36.16 C
ATOM 16 O2 C A 439 39.028 129.430 51.696 1.00 33.59 O
ATOM 17 N3 C A 439 37.797 129.227 49.815 1.00 36.49 N
ATOM 18 C4 C A 439 36.926 128.503 49.108 1.00 37.11 C
ATOM 19 N4 C A 439 36.517 128.992 47.939 1.00 36.82 N
ATOM 20 C5 C A 439 36.438 127.255 49.568 1.00 36.69 C
ATOM 21 C6 C A 439 36.899 126.819 50.741 1.00 37.34 C
ATOM 22 P G A 440 35.202 126.761 56.249 1.00 27.27 P
ATOM 23 OP1 G A 440 35.195 126.678 57.718 1.00 25.94 O
ATOM 24 OP2 G A 440 34.191 126.012 55.459 1.00 29.11 O
ATOM 25 O5' G A 440 35.212 128.296 55.829 1.00 26.42 O
TER
ATOM 1 O3' U B 442 42.915 131.249 62.465 1.00 29.62 O
ATOM 2 P A B 443 43.751 130.610 61.249 1.00 30.75 P
ATOM 3 OP1 A B 443 44.597 129.548 61.837 1.00 28.11 O
ATOM 4 OP2 A B 443 44.381 131.688 60.439 1.00 29.31 O
ATOM 5 O5' A B 443 42.646 129.934 60.334 1.00 31.26 O
ATOM 6 C5' A B 443 41.785 128.893 60.827 1.00 33.87 C
ATOM 7 C4' A B 443 40.892 128.419 59.716 1.00 34.49 C
ATOM 8 O4' A B 443 39.915 129.439 59.405 1.00 35.67 O
ATOM 9 C3' A B 443 41.629 128.203 58.412 1.00 33.83 C
ATOM 10 O3' A B 443 42.183 126.914 58.400 1.00 31.47 O
ATOM 11 C2' A B 443 40.517 128.335 57.394 1.00 35.06 C
ATOM 12 O2' A B 443 39.747 127.154 57.390 1.00 35.92 O
ATOM 13 C1' A B 443 39.690 129.468 58.007 1.00 36.24 C
ATOM 14 N9 A B 443 39.996 130.820 57.531 1.00 37.83 N
ATOM 15 C8 A B 443 40.577 131.840 58.243 1.00 39.44 C
ATOM 16 N7 A B 443 40.679 132.966 57.577 1.00 40.55 N
ATOM 17 C5 A B 443 40.147 132.665 56.334 1.00 40.64 C
ATOM 18 C6 A B 443 39.972 133.432 55.170 1.00 40.62 C
ATOM 19 N6 A B 443 40.331 134.710 55.057 1.00 39.37 N
ATOM 20 N1 A B 443 39.405 132.828 54.108 1.00 41.76 N
ATOM 21 C2 A B 443 39.048 131.542 54.210 1.00 42.24 C
ATOM 22 N3 A B 443 39.164 130.714 55.240 1.00 40.67 N
ATOM 23 C4 A B 443 39.726 131.342 56.288 1.00 40.01 C
ATOM 24 P G B 444 43.601 126.679 57.738 1.00 30.38 P
ATOM 25 OP1 G B 444 43.850 125.225 57.907 1.00 29.84 O
ATOM 26 OP2 G B 444 44.515 127.638 58.356 1.00 31.22 O
ATOM 27 O5' G B 444 43.411 127.141 56.220 1.00 30.39 O
TER
Atoms:
C2: (38.248,128.777,50.998)
OP1: (34.814,122.059,53.886)
OP2: (34.053,123.084,51.671)
C4: (36.926,128.503,49.108)
O5': (36.062,123.960,52.922)
C3': (36.904,126.321,54.384)
C1': (38.382,127.033,52.708)
O4': (38.287,125.621,52.721)
C5': (37.139,123.876,53.881)
P: (35.148,122.691,52.606)
O2: (39.028,129.430,51.696)
C4': (37.827,125.197,54.011)
C2': (37.689,127.557,53.956)
O2': (38.706,127.975,54.829)
N1: (37.815,127.544,51.457)
N3: (37.797,129.227,49.815)
N4: (36.517,128.992,47.939)
C6: (36.899,126.819,50.741)
C5: (36.438,127.255,49.568)
O3': (36.613,126.259,55.757)
OP1: (34.814,122.059,53.886)
OP2: (34.053,123.084,51.671)
C4: (36.926,128.503,49.108)
O5': (36.062,123.960,52.922)
C3': (36.904,126.321,54.384)
C1': (38.382,127.033,52.708)
O4': (38.287,125.621,52.721)
C5': (37.139,123.876,53.881)
P: (35.148,122.691,52.606)
O2: (39.028,129.430,51.696)
C4': (37.827,125.197,54.011)
C2': (37.689,127.557,53.956)
O2': (38.706,127.975,54.829)
N1: (37.815,127.544,51.457)
N3: (37.797,129.227,49.815)
N4: (36.517,128.992,47.939)
C6: (36.899,126.819,50.741)
C5: (36.438,127.255,49.568)
O3': (36.613,126.259,55.757)
OP1: (44.597,129.548,61.837)
OP2: (44.381,131.688,60.439)
C3': (41.629,128.203,58.412)
C1': (39.690,129.468,58.007)
C5': (41.785,128.893,60.827)
O4': (39.915,129.439,59.405)
C8: (40.577,131.840,58.243)
O2': (39.747,127.154,57.390)
C6: (39.972,133.432,55.170)
C5: (40.147,132.665,56.334)
C4: (39.726,131.342,56.288)
P: (43.751,130.610,61.249)
C4': (40.892,128.419,59.716)
C2': (40.517,128.335,57.394)
C2: (39.048,131.542,54.210)
N1: (39.405,132.828,54.108)
N3: (39.164,130.714,55.240)
N6: (40.331,134.710,55.057)
N7: (40.679,132.966,57.577)
N9: (39.996,130.820,57.531)
O5': (42.646,129.934,60.334)
O3': (42.183,126.914,58.400)
OP2: (44.381,131.688,60.439)
C3': (41.629,128.203,58.412)
C1': (39.690,129.468,58.007)
C5': (41.785,128.893,60.827)
O4': (39.915,129.439,59.405)
C8: (40.577,131.840,58.243)
O2': (39.747,127.154,57.390)
C6: (39.972,133.432,55.170)
C5: (40.147,132.665,56.334)
C4: (39.726,131.342,56.288)
P: (43.751,130.610,61.249)
C4': (40.892,128.419,59.716)
C2': (40.517,128.335,57.394)
C2: (39.048,131.542,54.210)
N1: (39.405,132.828,54.108)
N3: (39.164,130.714,55.240)
N6: (40.331,134.710,55.057)
N7: (40.679,132.966,57.577)
N9: (39.996,130.820,57.531)
O5': (42.646,129.934,60.334)
O3': (42.183,126.914,58.400)
Image (generated by PyMOL):