ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1312:A1734

Extra

PDB:
ATOM 1 O3' C A1311 51.867 -22.726 -58.815 1.00 45.54 O
ATOM 2 P C A1312 52.919 -23.615 -59.623 1.00 69.96 P
ATOM 3 OP1 C A1312 53.988 -22.691 -60.094 1.00 62.76 O
ATOM 4 OP2 C A1312 52.155 -24.411 -60.618 1.00 67.54 O
ATOM 5 O5' C A1312 53.496 -24.584 -58.508 1.00 66.79 O
ATOM 6 C5' C A1312 54.104 -24.064 -57.344 1.00 56.75 C
ATOM 7 C4' C A1312 54.687 -25.158 -56.511 1.00 50.36 C
ATOM 8 O4' C A1312 53.643 -25.837 -55.764 1.00 54.45 O
ATOM 9 C3' C A1312 55.330 -26.282 -57.273 1.00 51.97 C
ATOM 10 O3' C A1312 56.574 -25.933 -57.812 1.00 47.36 O
ATOM 11 C2' C A1312 55.399 -27.343 -56.206 1.00 54.46 C
ATOM 12 O2' C A1312 56.350 -26.981 -55.231 1.00 54.45 O
ATOM 13 C1' C A1312 54.014 -27.188 -55.590 1.00 55.10 C
ATOM 14 N1 C A1312 53.043 -28.042 -56.284 1.00 53.66 N
ATOM 15 C2 C A1312 53.048 -29.395 -55.934 1.00 63.09 C
ATOM 16 O2 C A1312 53.824 -29.762 -55.034 1.00 60.74 O
ATOM 17 N3 C A1312 52.205 -30.260 -56.553 1.00 65.88 N
ATOM 18 C4 C A1312 51.397 -29.807 -57.495 1.00 53.80 C
ATOM 19 N4 C A1312 50.606 -30.675 -58.081 1.00 52.64 N
ATOM 20 C5 C A1312 51.382 -28.445 -57.882 1.00 56.69 C
ATOM 21 C6 C A1312 52.225 -27.595 -57.271 1.00 56.71 C
ATOM 22 P G A1313 57.518 -27.050 -58.467 1.00 48.43 P
ATOM 23 OP1 G A1313 58.815 -26.365 -58.796 1.00 50.14 O
ATOM 24 OP2 G A1313 56.757 -27.728 -59.560 1.00 49.59 O
ATOM 25 O5' G A1313 57.722 -28.059 -57.280 1.00 47.44 O
TER

ATOM 1 O3' U B1733 63.454 -26.174 -50.297 1.00 46.14 O
ATOM 2 P A B1734 62.557 -25.152 -49.495 1.00 64.34 P
ATOM 3 OP1 A B1734 63.364 -23.917 -49.280 1.00 73.21 O
ATOM 4 OP2 A B1734 62.036 -25.874 -48.312 1.00 65.59 O
ATOM 5 O5' A B1734 61.390 -24.875 -50.537 1.00 59.87 O
ATOM 6 C5' A B1734 61.696 -24.573 -51.892 1.00 62.27 C
ATOM 7 C4' A B1734 60.559 -24.923 -52.830 1.00 53.40 C
ATOM 8 O4' A B1734 60.275 -26.342 -52.759 1.00 55.46 O
ATOM 9 C3' A B1734 59.220 -24.245 -52.563 1.00 44.35 C
ATOM 10 O3' A B1734 59.141 -22.962 -53.147 1.00 43.53 O
ATOM 11 C2' A B1734 58.241 -25.206 -53.181 1.00 52.59 C
ATOM 12 O2' A B1734 58.213 -25.007 -54.577 1.00 55.24 O
ATOM 13 C1' A B1734 58.899 -26.559 -52.909 1.00 53.51 C
ATOM 14 N9 A B1734 58.396 -27.201 -51.684 1.00 57.89 N
ATOM 15 C8 A B1734 58.860 -27.048 -50.403 1.00 67.07 C
ATOM 16 N7 A B1734 58.258 -27.775 -49.492 1.00 59.98 N
ATOM 17 C5 A B1734 57.339 -28.475 -50.240 1.00 60.06 C
ATOM 18 C6 A B1734 56.393 -29.421 -49.866 1.00 57.15 C
ATOM 19 N6 A B1734 56.228 -29.824 -48.626 1.00 63.18 N
ATOM 20 N1 A B1734 55.612 -29.934 -50.809 1.00 58.29 N
ATOM 21 C2 A B1734 55.812 -29.518 -52.069 1.00 64.72 C
ATOM 22 N3 A B1734 56.678 -28.637 -52.563 1.00 58.37 N
ATOM 23 C4 A B1734 57.421 -28.144 -51.577 1.00 57.96 C
ATOM 24 P A B1735 58.250 -21.805 -52.475 1.00 50.60 P
ATOM 25 OP1 A B1735 58.397 -20.585 -53.323 1.00 55.66 O
ATOM 26 OP2 A B1735 58.642 -21.734 -51.054 1.00 45.06 O
ATOM 27 O5' A B1735 56.773 -22.369 -52.602 1.00 55.34 O
TER

Atoms:
C2: (53.048,-29.395,-55.934)
OP1: (53.988,-22.691,-60.094)
OP2: (52.155,-24.411,-60.618)
C4: (51.397,-29.807,-57.495)
O5': (53.496,-24.584,-58.508)
C3': (55.330,-26.282,-57.273)
C1': (54.014,-27.188,-55.590)
O4': (53.643,-25.837,-55.764)
C5': (54.104,-24.064,-57.344)
P: (52.919,-23.615,-59.623)
O2: (53.824,-29.762,-55.034)
C4': (54.687,-25.158,-56.511)
C2': (55.399,-27.343,-56.206)
O2': (56.350,-26.981,-55.231)
N1: (53.043,-28.042,-56.284)
N3: (52.205,-30.260,-56.553)
N4: (50.606,-30.675,-58.081)
C6: (52.225,-27.595,-57.271)
C5: (51.382,-28.445,-57.882)
O3': (56.574,-25.933,-57.812)
OP1: (63.364,-23.917,-49.280)
OP2: (62.036,-25.874,-48.312)
C3': (59.220,-24.245,-52.563)
C1': (58.899,-26.559,-52.909)
C5': (61.696,-24.573,-51.892)
O4': (60.275,-26.342,-52.759)
C8: (58.860,-27.048,-50.403)
O2': (58.213,-25.007,-54.577)
C6: (56.393,-29.421,-49.866)
C5: (57.339,-28.475,-50.240)
C4: (57.421,-28.144,-51.577)
P: (62.557,-25.152,-49.495)
C4': (60.559,-24.923,-52.830)
C2': (58.241,-25.206,-53.181)
C2: (55.812,-29.518,-52.069)
N1: (55.612,-29.934,-50.809)
N3: (56.678,-28.637,-52.563)
N6: (56.228,-29.824,-48.626)
N7: (58.258,-27.775,-49.492)
N9: (58.396,-27.201,-51.684)
O5': (61.390,-24.875,-50.537)
O3': (59.141,-22.962,-53.147)
Image (generated by PyMOL):
PyMOL image
show in jmol