Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01028:01040
Extra
PDB:
ATOM 1 O3' C A1027 35.230 94.181 97.161 1.00 25.86 O
ATOM 2 P C A1028 35.123 95.170 95.907 1.00 22.49 P
ATOM 3 OP1 C A1028 33.904 95.998 96.098 1.00 23.70 O
ATOM 4 OP2 C A1028 35.284 94.362 94.672 1.00 22.39 O
ATOM 5 O5' C A1028 36.389 96.125 96.063 1.00 25.66 O
ATOM 6 C5' C A1028 36.411 97.164 97.060 1.00 24.60 C
ATOM 7 C4' C A1028 37.704 97.937 96.980 1.00 25.93 C
ATOM 8 O4' C A1028 38.820 97.055 97.288 1.00 24.68 O
ATOM 9 C3' C A1028 38.060 98.506 95.612 1.00 24.24 C
ATOM 10 O3' C A1028 37.419 99.748 95.364 1.00 22.13 O
ATOM 11 C2' C A1028 39.557 98.702 95.740 1.00 24.00 C
ATOM 12 O2' C A1028 39.816 99.843 96.523 1.00 25.32 O
ATOM 13 C1' C A1028 39.952 97.454 96.530 1.00 23.54 C
ATOM 14 N1 C A1028 40.359 96.331 95.667 1.00 24.04 N
ATOM 15 C2 C A1028 41.662 96.309 95.169 1.00 23.44 C
ATOM 16 O2 C A1028 42.406 97.271 95.403 1.00 26.42 O
ATOM 17 N3 C A1028 42.075 95.252 94.439 1.00 22.43 N
ATOM 18 C4 C A1028 41.229 94.249 94.179 1.00 24.22 C
ATOM 19 N4 C A1028 41.683 93.207 93.466 1.00 16.23 N
ATOM 20 C5 C A1028 39.880 94.266 94.639 1.00 24.10 C
ATOM 21 C6 C A1028 39.491 95.316 95.372 1.00 24.13 C
ATOM 22 P A A1029 37.080 100.176 93.853 1.00 23.85 P
ATOM 23 OP1 A A1029 36.544 101.548 93.901 1.00 21.38 O
ATOM 24 OP2 A A1029 36.270 99.104 93.233 1.00 23.09 O
ATOM 25 O5' A A1029 38.500 100.163 93.117 1.00 25.88 O
TER
ATOM 1 O3' C B1039 37.184 106.079 102.934 1.00 45.78 O
ATOM 2 P A B1040 37.995 106.739 101.715 1.00 45.89 P
ATOM 3 OP1 A B1040 39.227 107.383 102.226 1.00 47.17 O
ATOM 4 OP2 A B1040 37.044 107.519 100.885 1.00 46.74 O
ATOM 5 O5' A B1040 38.465 105.470 100.884 1.00 39.40 O
ATOM 6 C5' A B1040 38.617 104.197 101.516 1.00 30.30 C
ATOM 7 C4' A B1040 38.610 103.123 100.471 1.00 30.05 C
ATOM 8 O4' A B1040 39.654 103.398 99.513 1.00 27.16 O
ATOM 9 C3' A B1040 38.887 101.709 100.936 1.00 29.51 C
ATOM 10 O3' A B1040 37.675 101.125 101.408 1.00 31.25 O
ATOM 11 C2' A B1040 39.344 101.049 99.640 1.00 28.45 C
ATOM 12 O2' A B1040 38.255 100.760 98.789 1.00 29.98 O
ATOM 13 C1' A B1040 40.124 102.184 98.975 1.00 26.12 C
ATOM 14 N9 A B1040 41.576 102.144 99.125 1.00 24.49 N
ATOM 15 C8 A B1040 42.347 102.749 100.087 1.00 24.68 C
ATOM 16 N7 A B1040 43.633 102.558 99.927 1.00 24.28 N
ATOM 17 C5 A B1040 43.714 101.769 98.787 1.00 21.49 C
ATOM 18 C6 A B1040 44.804 101.227 98.086 1.00 20.89 C
ATOM 19 N6 A B1040 46.078 101.406 98.443 1.00 19.21 N
ATOM 20 N1 A B1040 44.538 100.483 96.990 1.00 21.56 N
ATOM 21 C2 A B1040 43.267 100.305 96.633 1.00 19.49 C
ATOM 22 N3 A B1040 42.163 100.765 97.208 1.00 20.93 N
ATOM 23 C4 A B1040 42.457 101.498 98.291 1.00 21.47 C
ATOM 24 P A B1041 37.508 100.736 102.961 1.00 29.49 P
ATOM 25 OP1 A B1041 36.077 100.970 103.280 1.00 30.42 O
ATOM 26 OP2 A B1041 38.556 101.389 103.780 1.00 28.51 O
ATOM 27 O5' A B1041 37.766 99.169 102.973 1.00 28.40 O
TER
ATOM 2 P C A1028 35.123 95.170 95.907 1.00 22.49 P
ATOM 3 OP1 C A1028 33.904 95.998 96.098 1.00 23.70 O
ATOM 4 OP2 C A1028 35.284 94.362 94.672 1.00 22.39 O
ATOM 5 O5' C A1028 36.389 96.125 96.063 1.00 25.66 O
ATOM 6 C5' C A1028 36.411 97.164 97.060 1.00 24.60 C
ATOM 7 C4' C A1028 37.704 97.937 96.980 1.00 25.93 C
ATOM 8 O4' C A1028 38.820 97.055 97.288 1.00 24.68 O
ATOM 9 C3' C A1028 38.060 98.506 95.612 1.00 24.24 C
ATOM 10 O3' C A1028 37.419 99.748 95.364 1.00 22.13 O
ATOM 11 C2' C A1028 39.557 98.702 95.740 1.00 24.00 C
ATOM 12 O2' C A1028 39.816 99.843 96.523 1.00 25.32 O
ATOM 13 C1' C A1028 39.952 97.454 96.530 1.00 23.54 C
ATOM 14 N1 C A1028 40.359 96.331 95.667 1.00 24.04 N
ATOM 15 C2 C A1028 41.662 96.309 95.169 1.00 23.44 C
ATOM 16 O2 C A1028 42.406 97.271 95.403 1.00 26.42 O
ATOM 17 N3 C A1028 42.075 95.252 94.439 1.00 22.43 N
ATOM 18 C4 C A1028 41.229 94.249 94.179 1.00 24.22 C
ATOM 19 N4 C A1028 41.683 93.207 93.466 1.00 16.23 N
ATOM 20 C5 C A1028 39.880 94.266 94.639 1.00 24.10 C
ATOM 21 C6 C A1028 39.491 95.316 95.372 1.00 24.13 C
ATOM 22 P A A1029 37.080 100.176 93.853 1.00 23.85 P
ATOM 23 OP1 A A1029 36.544 101.548 93.901 1.00 21.38 O
ATOM 24 OP2 A A1029 36.270 99.104 93.233 1.00 23.09 O
ATOM 25 O5' A A1029 38.500 100.163 93.117 1.00 25.88 O
TER
ATOM 1 O3' C B1039 37.184 106.079 102.934 1.00 45.78 O
ATOM 2 P A B1040 37.995 106.739 101.715 1.00 45.89 P
ATOM 3 OP1 A B1040 39.227 107.383 102.226 1.00 47.17 O
ATOM 4 OP2 A B1040 37.044 107.519 100.885 1.00 46.74 O
ATOM 5 O5' A B1040 38.465 105.470 100.884 1.00 39.40 O
ATOM 6 C5' A B1040 38.617 104.197 101.516 1.00 30.30 C
ATOM 7 C4' A B1040 38.610 103.123 100.471 1.00 30.05 C
ATOM 8 O4' A B1040 39.654 103.398 99.513 1.00 27.16 O
ATOM 9 C3' A B1040 38.887 101.709 100.936 1.00 29.51 C
ATOM 10 O3' A B1040 37.675 101.125 101.408 1.00 31.25 O
ATOM 11 C2' A B1040 39.344 101.049 99.640 1.00 28.45 C
ATOM 12 O2' A B1040 38.255 100.760 98.789 1.00 29.98 O
ATOM 13 C1' A B1040 40.124 102.184 98.975 1.00 26.12 C
ATOM 14 N9 A B1040 41.576 102.144 99.125 1.00 24.49 N
ATOM 15 C8 A B1040 42.347 102.749 100.087 1.00 24.68 C
ATOM 16 N7 A B1040 43.633 102.558 99.927 1.00 24.28 N
ATOM 17 C5 A B1040 43.714 101.769 98.787 1.00 21.49 C
ATOM 18 C6 A B1040 44.804 101.227 98.086 1.00 20.89 C
ATOM 19 N6 A B1040 46.078 101.406 98.443 1.00 19.21 N
ATOM 20 N1 A B1040 44.538 100.483 96.990 1.00 21.56 N
ATOM 21 C2 A B1040 43.267 100.305 96.633 1.00 19.49 C
ATOM 22 N3 A B1040 42.163 100.765 97.208 1.00 20.93 N
ATOM 23 C4 A B1040 42.457 101.498 98.291 1.00 21.47 C
ATOM 24 P A B1041 37.508 100.736 102.961 1.00 29.49 P
ATOM 25 OP1 A B1041 36.077 100.970 103.280 1.00 30.42 O
ATOM 26 OP2 A B1041 38.556 101.389 103.780 1.00 28.51 O
ATOM 27 O5' A B1041 37.766 99.169 102.973 1.00 28.40 O
TER
Atoms:
C2: (41.662,96.309,95.169)
OP1: (33.904,95.998,96.098)
OP2: (35.284,94.362,94.672)
C4: (41.229,94.249,94.179)
O5': (36.389,96.125,96.063)
C3': (38.060,98.506,95.612)
C1': (39.952,97.454,96.530)
O4': (38.820,97.055,97.288)
C5': (36.411,97.164,97.060)
P: (35.123,95.170,95.907)
O2: (42.406,97.271,95.403)
C4': (37.704,97.937,96.980)
C2': (39.557,98.702,95.740)
O2': (39.816,99.843,96.523)
N1: (40.359,96.331,95.667)
N3: (42.075,95.252,94.439)
N4: (41.683,93.207,93.466)
C6: (39.491,95.316,95.372)
C5: (39.880,94.266,94.639)
O3': (37.419,99.748,95.364)
OP1: (33.904,95.998,96.098)
OP2: (35.284,94.362,94.672)
C4: (41.229,94.249,94.179)
O5': (36.389,96.125,96.063)
C3': (38.060,98.506,95.612)
C1': (39.952,97.454,96.530)
O4': (38.820,97.055,97.288)
C5': (36.411,97.164,97.060)
P: (35.123,95.170,95.907)
O2: (42.406,97.271,95.403)
C4': (37.704,97.937,96.980)
C2': (39.557,98.702,95.740)
O2': (39.816,99.843,96.523)
N1: (40.359,96.331,95.667)
N3: (42.075,95.252,94.439)
N4: (41.683,93.207,93.466)
C6: (39.491,95.316,95.372)
C5: (39.880,94.266,94.639)
O3': (37.419,99.748,95.364)
OP1: (39.227,107.383,102.226)
OP2: (37.044,107.519,100.885)
C3': (38.887,101.709,100.936)
C1': (40.124,102.184,98.975)
C5': (38.617,104.197,101.516)
O4': (39.654,103.398,99.513)
C8: (42.347,102.749,100.087)
O2': (38.255,100.760,98.789)
C6: (44.804,101.227,98.086)
C5: (43.714,101.769,98.787)
C4: (42.457,101.498,98.291)
P: (37.995,106.739,101.715)
C4': (38.610,103.123,100.471)
C2': (39.344,101.049,99.640)
C2: (43.267,100.305,96.633)
N1: (44.538,100.483,96.990)
N3: (42.163,100.765,97.208)
N6: (46.078,101.406,98.443)
N7: (43.633,102.558,99.927)
N9: (41.576,102.144,99.125)
O5': (38.465,105.470,100.884)
O3': (37.675,101.125,101.408)
OP2: (37.044,107.519,100.885)
C3': (38.887,101.709,100.936)
C1': (40.124,102.184,98.975)
C5': (38.617,104.197,101.516)
O4': (39.654,103.398,99.513)
C8: (42.347,102.749,100.087)
O2': (38.255,100.760,98.789)
C6: (44.804,101.227,98.086)
C5: (43.714,101.769,98.787)
C4: (42.457,101.498,98.291)
P: (37.995,106.739,101.715)
C4': (38.610,103.123,100.471)
C2': (39.344,101.049,99.640)
C2: (43.267,100.305,96.633)
N1: (44.538,100.483,96.990)
N3: (42.163,100.765,97.208)
N6: (46.078,101.406,98.443)
N7: (43.633,102.558,99.927)
N9: (41.576,102.144,99.125)
O5': (38.465,105.470,100.884)
O3': (37.675,101.125,101.408)
Image (generated by PyMOL):