Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B35:B28
Extra
PDB:
ATOM 1 O3' U A 34 -24.253 -10.334 28.512 1.00 48.08 O
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' G B 27 -8.591 -10.312 31.008 1.00 36.17 O
ATOM 2 P A B 28 -9.554 -9.492 32.006 1.00 36.03 P
ATOM 3 OP1 A B 28 -9.525 -8.057 31.625 1.00 35.18 O
ATOM 4 OP2 A B 28 -9.195 -9.894 33.381 1.00 36.23 O
ATOM 5 O5' A B 28 -11.006 -10.077 31.723 1.00 36.16 O
ATOM 6 C5' A B 28 -12.099 -9.809 32.630 1.00 36.62 C
ATOM 7 C4' A B 28 -13.420 -10.191 31.992 1.00 36.53 C
ATOM 8 O4' A B 28 -13.622 -9.390 30.803 1.00 36.92 O
ATOM 9 C3' A B 28 -13.528 -11.634 31.533 1.00 35.73 C
ATOM 10 O3' A B 28 -14.024 -12.411 32.618 1.00 35.72 O
ATOM 11 C2' A B 28 -14.524 -11.546 30.381 1.00 35.68 C
ATOM 12 O2' A B 28 -15.859 -11.500 30.831 1.00 35.47 O
ATOM 13 C1' A B 28 -14.203 -10.176 29.784 1.00 35.75 C
ATOM 14 N9 A B 28 -13.289 -10.161 28.637 1.00 35.80 N
ATOM 15 C8 A B 28 -12.021 -9.625 28.601 1.00 35.90 C
ATOM 16 N7 A B 28 -11.450 -9.697 27.425 1.00 35.89 N
ATOM 17 C5 A B 28 -12.396 -10.335 26.632 1.00 35.86 C
ATOM 18 C6 A B 28 -12.396 -10.702 25.278 1.00 35.85 C
ATOM 19 N6 A B 28 -11.381 -10.453 24.449 1.00 37.28 N
ATOM 20 N1 A B 28 -13.486 -11.338 24.798 1.00 34.84 N
ATOM 21 C2 A B 28 -14.500 -11.578 25.627 1.00 34.93 C
ATOM 22 N3 A B 28 -14.624 -11.275 26.918 1.00 35.81 N
ATOM 23 C4 A B 28 -13.525 -10.643 27.367 1.00 35.58 C
ATOM 24 P G B 29 -13.423 -13.877 32.906 1.00 35.97 P
ATOM 25 OP1 G B 29 -13.929 -14.316 34.238 1.00 35.20 O
ATOM 26 OP2 G B 29 -11.949 -13.869 32.641 1.00 34.49 O
ATOM 27 O5' G B 29 -14.137 -14.787 31.816 1.00 34.06 O
TER
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' G B 27 -8.591 -10.312 31.008 1.00 36.17 O
ATOM 2 P A B 28 -9.554 -9.492 32.006 1.00 36.03 P
ATOM 3 OP1 A B 28 -9.525 -8.057 31.625 1.00 35.18 O
ATOM 4 OP2 A B 28 -9.195 -9.894 33.381 1.00 36.23 O
ATOM 5 O5' A B 28 -11.006 -10.077 31.723 1.00 36.16 O
ATOM 6 C5' A B 28 -12.099 -9.809 32.630 1.00 36.62 C
ATOM 7 C4' A B 28 -13.420 -10.191 31.992 1.00 36.53 C
ATOM 8 O4' A B 28 -13.622 -9.390 30.803 1.00 36.92 O
ATOM 9 C3' A B 28 -13.528 -11.634 31.533 1.00 35.73 C
ATOM 10 O3' A B 28 -14.024 -12.411 32.618 1.00 35.72 O
ATOM 11 C2' A B 28 -14.524 -11.546 30.381 1.00 35.68 C
ATOM 12 O2' A B 28 -15.859 -11.500 30.831 1.00 35.47 O
ATOM 13 C1' A B 28 -14.203 -10.176 29.784 1.00 35.75 C
ATOM 14 N9 A B 28 -13.289 -10.161 28.637 1.00 35.80 N
ATOM 15 C8 A B 28 -12.021 -9.625 28.601 1.00 35.90 C
ATOM 16 N7 A B 28 -11.450 -9.697 27.425 1.00 35.89 N
ATOM 17 C5 A B 28 -12.396 -10.335 26.632 1.00 35.86 C
ATOM 18 C6 A B 28 -12.396 -10.702 25.278 1.00 35.85 C
ATOM 19 N6 A B 28 -11.381 -10.453 24.449 1.00 37.28 N
ATOM 20 N1 A B 28 -13.486 -11.338 24.798 1.00 34.84 N
ATOM 21 C2 A B 28 -14.500 -11.578 25.627 1.00 34.93 C
ATOM 22 N3 A B 28 -14.624 -11.275 26.918 1.00 35.81 N
ATOM 23 C4 A B 28 -13.525 -10.643 27.367 1.00 35.58 C
ATOM 24 P G B 29 -13.423 -13.877 32.906 1.00 35.97 P
ATOM 25 OP1 G B 29 -13.929 -14.316 34.238 1.00 35.20 O
ATOM 26 OP2 G B 29 -11.949 -13.869 32.641 1.00 34.49 O
ATOM 27 O5' G B 29 -14.137 -14.787 31.816 1.00 34.06 O
TER
Atoms:
C2: (-19.501,-13.114,25.543)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
OP1: (-9.525,-8.057,31.625)
OP2: (-9.195,-9.894,33.381)
C3': (-13.528,-11.634,31.533)
C1': (-14.203,-10.176,29.784)
C5': (-12.099,-9.809,32.630)
O4': (-13.622,-9.390,30.803)
C8: (-12.021,-9.625,28.601)
O2': (-15.859,-11.500,30.831)
C6: (-12.396,-10.702,25.278)
C5: (-12.396,-10.335,26.632)
C4: (-13.525,-10.643,27.367)
P: (-9.554,-9.492,32.006)
C4': (-13.420,-10.191,31.992)
C2': (-14.524,-11.546,30.381)
C2: (-14.500,-11.578,25.627)
N1: (-13.486,-11.338,24.798)
N3: (-14.624,-11.275,26.918)
N6: (-11.381,-10.453,24.449)
N7: (-11.450,-9.697,27.425)
N9: (-13.289,-10.161,28.637)
O5': (-11.006,-10.077,31.723)
O3': (-14.024,-12.411,32.618)
OP2: (-9.195,-9.894,33.381)
C3': (-13.528,-11.634,31.533)
C1': (-14.203,-10.176,29.784)
C5': (-12.099,-9.809,32.630)
O4': (-13.622,-9.390,30.803)
C8: (-12.021,-9.625,28.601)
O2': (-15.859,-11.500,30.831)
C6: (-12.396,-10.702,25.278)
C5: (-12.396,-10.335,26.632)
C4: (-13.525,-10.643,27.367)
P: (-9.554,-9.492,32.006)
C4': (-13.420,-10.191,31.992)
C2': (-14.524,-11.546,30.381)
C2: (-14.500,-11.578,25.627)
N1: (-13.486,-11.338,24.798)
N3: (-14.624,-11.275,26.918)
N6: (-11.381,-10.453,24.449)
N7: (-11.450,-9.697,27.425)
N9: (-13.289,-10.161,28.637)
O5': (-11.006,-10.077,31.723)
O3': (-14.024,-12.411,32.618)
Image (generated by PyMOL):