ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A957:A930

Extra

PDB:
ATOM 1 O3' C A 956 -92.888 85.020 94.167 1.00 90.39 O
ATOM 2 P C A 957 -93.510 83.747 94.918 1.00 52.77 P
ATOM 3 OP1 C A 957 -92.409 83.110 95.693 1.00 72.26 O
ATOM 4 OP2 C A 957 -94.270 82.955 93.923 1.00 74.19 O
ATOM 5 O5' C A 957 -94.537 84.379 95.956 1.00 12.81 O
ATOM 6 C5' C A 957 -94.100 85.396 96.872 1.00 12.05 C
ATOM 7 C4' C A 957 -95.271 85.999 97.594 1.00 11.48 C
ATOM 8 O4' C A 957 -96.033 86.866 96.725 1.00 10.98 O
ATOM 9 C3' C A 957 -96.280 85.018 98.152 1.00 11.07 C
ATOM 10 O3' C A 957 -95.813 84.526 99.391 1.00 12.45 O
ATOM 11 C2' C A 957 -97.528 85.880 98.313 1.00 10.16 C
ATOM 12 O2' C A 957 -97.532 86.605 99.525 1.00 8.87 O
ATOM 13 C1' C A 957 -97.391 86.873 97.148 1.00 10.13 C
ATOM 14 N1 C A 957 -98.272 86.572 95.996 1.00 31.35 N
ATOM 15 C2 C A 957 -99.674 86.651 96.165 1.00 31.07 C
ATOM 16 O2 C A 957 -100.136 87.025 97.248 1.00 31.29 O
ATOM 17 N3 C A 957 -100.480 86.318 95.137 1.00 31.31 N
ATOM 18 C4 C A 957 -99.950 85.929 93.972 1.00 31.82 C
ATOM 19 N4 C A 957 -100.785 85.575 92.991 1.00 32.05 N
ATOM 20 C5 C A 957 -98.539 85.876 93.762 1.00 32.01 C
ATOM 21 C6 C A 957 -97.746 86.203 94.788 1.00 31.93 C
ATOM 22 P A A 958 -96.281 83.085 99.906 1.00 48.19 P
ATOM 23 OP1 A A 958 -95.458 82.732 101.095 1.00 85.09 O
ATOM 24 OP2 A A 958 -96.311 82.170 98.739 1.00 85.90 O
ATOM 25 O5' A A 958 -97.769 83.339 100.403 1.00 64.06 O
TER

ATOM 1 O3' U B 929 -95.084 93.743 105.028 1.00 43.33 O
ATOM 2 P A B 930 -94.975 92.365 105.856 1.00 62.38 P
ATOM 3 OP1 A B 930 -96.248 92.208 106.623 1.00 98.63 O
ATOM 4 OP2 A B 930 -93.671 92.337 106.581 1.00 98.50 O
ATOM 5 O5' A B 930 -94.952 91.263 104.708 1.00 40.16 O
ATOM 6 C5' A B 930 -94.430 89.941 104.946 1.00 40.40 C
ATOM 7 C4' A B 930 -94.861 89.014 103.835 1.00 40.38 C
ATOM 8 O4' A B 930 -96.294 88.859 103.879 1.00 41.70 O
ATOM 9 C3' A B 930 -94.544 89.540 102.447 1.00 39.98 C
ATOM 10 O3' A B 930 -93.260 89.047 102.080 1.00 38.52 O
ATOM 11 C2' A B 930 -95.649 88.952 101.573 1.00 40.98 C
ATOM 12 O2' A B 930 -95.329 87.698 101.024 1.00 40.72 O
ATOM 13 C1' A B 930 -96.796 88.770 102.568 1.00 42.21 C
ATOM 14 N9 A B 930 -97.938 89.670 102.445 1.00 50.12 N
ATOM 15 C8 A B 930 -98.404 90.592 103.352 1.00 50.94 C
ATOM 16 N7 A B 930 -99.497 91.202 102.969 1.00 51.58 N
ATOM 17 C5 A B 930 -99.760 90.654 101.721 1.00 50.85 C
ATOM 18 C6 A B 930 -100.779 90.880 100.790 1.00 51.20 C
ATOM 19 N6 A B 930 -101.769 91.754 100.971 1.00 51.50 N
ATOM 20 N1 A B 930 -100.747 90.173 99.645 1.00 50.80 N
ATOM 21 C2 A B 930 -99.747 89.305 99.455 1.00 50.97 C
ATOM 22 N3 A B 930 -98.732 89.008 100.252 1.00 50.81 N
ATOM 23 C4 A B 930 -98.799 89.723 101.382 1.00 50.46 C
ATOM 24 P A B 931 -92.100 90.065 101.644 1.00 91.53 P
ATOM 25 OP1 A B 931 -90.804 89.365 101.857 1.00115.42 O
ATOM 26 OP2 A B 931 -92.340 91.375 102.309 1.00116.03 O
ATOM 27 O5' A B 931 -92.337 90.235 100.078 1.00 27.70 O
TER

Atoms:
C2: (-99.674,86.651,96.165)
OP1: (-92.409,83.110,95.693)
OP2: (-94.270,82.955,93.923)
C4: (-99.950,85.929,93.972)
O5': (-94.537,84.379,95.956)
C3': (-96.280,85.018,98.152)
C1': (-97.391,86.873,97.148)
O4': (-96.033,86.866,96.725)
C5': (-94.100,85.396,96.872)
P: (-93.510,83.747,94.918)
O2: (-100.136,87.025,97.248)
C4': (-95.271,85.999,97.594)
C2': (-97.528,85.880,98.313)
O2': (-97.532,86.605,99.525)
N1: (-98.272,86.572,95.996)
N3: (-100.480,86.318,95.137)
N4: (-100.785,85.575,92.991)
C6: (-97.746,86.203,94.788)
C5: (-98.539,85.876,93.762)
O3': (-95.813,84.526,99.391)
OP1: (-96.248,92.208,106.623)
OP2: (-93.671,92.337,106.581)
C3': (-94.544,89.540,102.447)
C1': (-96.796,88.770,102.568)
C5': (-94.430,89.941,104.946)
O4': (-96.294,88.859,103.879)
C8: (-98.404,90.592,103.352)
O2': (-95.329,87.698,101.024)
C6: (-100.779,90.880,100.790)
C5: (-99.760,90.654,101.721)
C4: (-98.799,89.723,101.382)
P: (-94.975,92.365,105.856)
C4': (-94.861,89.014,103.835)
C2': (-95.649,88.952,101.573)
C2: (-99.747,89.305,99.455)
N1: (-100.747,90.173,99.645)
N3: (-98.732,89.008,100.252)
N6: (-101.769,91.754,100.971)
N7: (-99.497,91.202,102.969)
N9: (-97.938,89.670,102.445)
O5': (-94.952,91.263,104.708)
O3': (-93.260,89.047,102.080)
Image (generated by PyMOL):
PyMOL image
show in jmol