Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1028:A1040
Extra
PDB:
ATOM 1 O3' C A1027 35.264 94.605 97.198 1.00 22.48 O
ATOM 2 P C A1028 35.123 95.560 95.924 1.00 22.41 P
ATOM 3 OP1 C A1028 33.895 96.362 96.104 1.00 19.30 O
ATOM 4 OP2 C A1028 35.283 94.720 94.715 1.00 20.95 O
ATOM 5 O5' C A1028 36.368 96.542 96.054 1.00 20.13 O
ATOM 6 C5' C A1028 36.454 97.503 97.140 1.00 21.83 C
ATOM 7 C4' C A1028 37.740 98.290 97.038 1.00 21.87 C
ATOM 8 O4' C A1028 38.870 97.413 97.289 1.00 21.09 O
ATOM 9 C3' C A1028 38.019 98.838 95.647 1.00 22.49 C
ATOM 10 O3' C A1028 37.374 100.073 95.395 1.00 23.61 O
ATOM 11 C2' C A1028 39.523 99.016 95.655 1.00 20.18 C
ATOM 12 O2' C A1028 39.886 100.191 96.336 1.00 19.04 O
ATOM 13 C1' C A1028 39.960 97.803 96.469 1.00 21.11 C
ATOM 14 N1 C A1028 40.362 96.668 95.628 1.00 20.69 N
ATOM 15 C2 C A1028 41.663 96.637 95.161 1.00 22.42 C
ATOM 16 O2 C A1028 42.409 97.599 95.410 1.00 22.33 O
ATOM 17 N3 C A1028 42.080 95.573 94.446 1.00 20.87 N
ATOM 18 C4 C A1028 41.237 94.573 94.183 1.00 19.38 C
ATOM 19 N4 C A1028 41.700 93.532 93.501 1.00 18.19 N
ATOM 20 C5 C A1028 39.883 94.599 94.615 1.00 21.23 C
ATOM 21 C6 C A1028 39.492 95.656 95.326 1.00 21.14 C
ATOM 22 P A A1029 37.094 100.503 93.883 1.00 24.59 P
ATOM 23 OP1 A A1029 36.536 101.875 93.877 1.00 24.34 O
ATOM 24 OP2 A A1029 36.309 99.403 93.300 1.00 23.19 O
ATOM 25 O5' A A1029 38.538 100.465 93.196 1.00 22.57 O
TER
ATOM 1 O3' C B1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 2 P A B1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 3 OP1 A B1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 4 OP2 A B1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 5 O5' A B1040 38.500 105.803 100.839 1.00 37.69 O
ATOM 6 C5' A B1040 38.605 104.508 101.451 1.00 31.21 C
ATOM 7 C4' A B1040 38.568 103.428 100.401 1.00 27.96 C
ATOM 8 O4' A B1040 39.598 103.674 99.429 1.00 28.16 O
ATOM 9 C3' A B1040 38.858 102.030 100.909 1.00 27.27 C
ATOM 10 O3' A B1040 37.669 101.431 101.394 1.00 28.06 O
ATOM 11 C2' A B1040 39.345 101.315 99.662 1.00 27.32 C
ATOM 12 O2' A B1040 38.272 100.872 98.858 1.00 27.05 O
ATOM 13 C1' A B1040 40.102 102.441 98.952 1.00 27.39 C
ATOM 14 N9 A B1040 41.555 102.438 99.137 1.00 28.06 N
ATOM 15 C8 A B1040 42.318 103.052 100.098 1.00 26.62 C
ATOM 16 N7 A B1040 43.604 102.879 99.935 1.00 26.52 N
ATOM 17 C5 A B1040 43.693 102.090 98.799 1.00 26.28 C
ATOM 18 C6 A B1040 44.785 101.556 98.098 1.00 26.33 C
ATOM 19 N6 A B1040 46.058 101.720 98.461 1.00 26.08 N
ATOM 20 N1 A B1040 44.521 100.825 96.996 1.00 25.87 N
ATOM 21 C2 A B1040 43.252 100.635 96.643 1.00 24.84 C
ATOM 22 N3 A B1040 42.150 101.070 97.224 1.00 26.09 N
ATOM 23 C4 A B1040 42.442 101.805 98.305 1.00 26.55 C
ATOM 24 P A B1041 37.539 101.048 102.943 1.00 29.07 P
ATOM 25 OP1 A B1041 36.130 101.297 103.315 1.00 29.12 O
ATOM 26 OP2 A B1041 38.629 101.708 103.695 1.00 28.35 O
ATOM 27 O5' A B1041 37.776 99.483 102.955 1.00 27.75 O
TER
ATOM 2 P C A1028 35.123 95.560 95.924 1.00 22.41 P
ATOM 3 OP1 C A1028 33.895 96.362 96.104 1.00 19.30 O
ATOM 4 OP2 C A1028 35.283 94.720 94.715 1.00 20.95 O
ATOM 5 O5' C A1028 36.368 96.542 96.054 1.00 20.13 O
ATOM 6 C5' C A1028 36.454 97.503 97.140 1.00 21.83 C
ATOM 7 C4' C A1028 37.740 98.290 97.038 1.00 21.87 C
ATOM 8 O4' C A1028 38.870 97.413 97.289 1.00 21.09 O
ATOM 9 C3' C A1028 38.019 98.838 95.647 1.00 22.49 C
ATOM 10 O3' C A1028 37.374 100.073 95.395 1.00 23.61 O
ATOM 11 C2' C A1028 39.523 99.016 95.655 1.00 20.18 C
ATOM 12 O2' C A1028 39.886 100.191 96.336 1.00 19.04 O
ATOM 13 C1' C A1028 39.960 97.803 96.469 1.00 21.11 C
ATOM 14 N1 C A1028 40.362 96.668 95.628 1.00 20.69 N
ATOM 15 C2 C A1028 41.663 96.637 95.161 1.00 22.42 C
ATOM 16 O2 C A1028 42.409 97.599 95.410 1.00 22.33 O
ATOM 17 N3 C A1028 42.080 95.573 94.446 1.00 20.87 N
ATOM 18 C4 C A1028 41.237 94.573 94.183 1.00 19.38 C
ATOM 19 N4 C A1028 41.700 93.532 93.501 1.00 18.19 N
ATOM 20 C5 C A1028 39.883 94.599 94.615 1.00 21.23 C
ATOM 21 C6 C A1028 39.492 95.656 95.326 1.00 21.14 C
ATOM 22 P A A1029 37.094 100.503 93.883 1.00 24.59 P
ATOM 23 OP1 A A1029 36.536 101.875 93.877 1.00 24.34 O
ATOM 24 OP2 A A1029 36.309 99.403 93.300 1.00 23.19 O
ATOM 25 O5' A A1029 38.538 100.465 93.196 1.00 22.57 O
TER
ATOM 1 O3' C B1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 2 P A B1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 3 OP1 A B1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 4 OP2 A B1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 5 O5' A B1040 38.500 105.803 100.839 1.00 37.69 O
ATOM 6 C5' A B1040 38.605 104.508 101.451 1.00 31.21 C
ATOM 7 C4' A B1040 38.568 103.428 100.401 1.00 27.96 C
ATOM 8 O4' A B1040 39.598 103.674 99.429 1.00 28.16 O
ATOM 9 C3' A B1040 38.858 102.030 100.909 1.00 27.27 C
ATOM 10 O3' A B1040 37.669 101.431 101.394 1.00 28.06 O
ATOM 11 C2' A B1040 39.345 101.315 99.662 1.00 27.32 C
ATOM 12 O2' A B1040 38.272 100.872 98.858 1.00 27.05 O
ATOM 13 C1' A B1040 40.102 102.441 98.952 1.00 27.39 C
ATOM 14 N9 A B1040 41.555 102.438 99.137 1.00 28.06 N
ATOM 15 C8 A B1040 42.318 103.052 100.098 1.00 26.62 C
ATOM 16 N7 A B1040 43.604 102.879 99.935 1.00 26.52 N
ATOM 17 C5 A B1040 43.693 102.090 98.799 1.00 26.28 C
ATOM 18 C6 A B1040 44.785 101.556 98.098 1.00 26.33 C
ATOM 19 N6 A B1040 46.058 101.720 98.461 1.00 26.08 N
ATOM 20 N1 A B1040 44.521 100.825 96.996 1.00 25.87 N
ATOM 21 C2 A B1040 43.252 100.635 96.643 1.00 24.84 C
ATOM 22 N3 A B1040 42.150 101.070 97.224 1.00 26.09 N
ATOM 23 C4 A B1040 42.442 101.805 98.305 1.00 26.55 C
ATOM 24 P A B1041 37.539 101.048 102.943 1.00 29.07 P
ATOM 25 OP1 A B1041 36.130 101.297 103.315 1.00 29.12 O
ATOM 26 OP2 A B1041 38.629 101.708 103.695 1.00 28.35 O
ATOM 27 O5' A B1041 37.776 99.483 102.955 1.00 27.75 O
TER
Atoms:
C2: (41.663,96.637,95.161)
OP1: (33.895,96.362,96.104)
OP2: (35.283,94.720,94.715)
C4: (41.237,94.573,94.183)
O5': (36.368,96.542,96.054)
C3': (38.019,98.838,95.647)
C1': (39.960,97.803,96.469)
O4': (38.870,97.413,97.289)
C5': (36.454,97.503,97.140)
P: (35.123,95.560,95.924)
O2: (42.409,97.599,95.410)
C4': (37.740,98.290,97.038)
C2': (39.523,99.016,95.655)
O2': (39.886,100.191,96.336)
N1: (40.362,96.668,95.628)
N3: (42.080,95.573,94.446)
N4: (41.700,93.532,93.501)
C6: (39.492,95.656,95.326)
C5: (39.883,94.599,94.615)
O3': (37.374,100.073,95.395)
OP1: (33.895,96.362,96.104)
OP2: (35.283,94.720,94.715)
C4: (41.237,94.573,94.183)
O5': (36.368,96.542,96.054)
C3': (38.019,98.838,95.647)
C1': (39.960,97.803,96.469)
O4': (38.870,97.413,97.289)
C5': (36.454,97.503,97.140)
P: (35.123,95.560,95.924)
O2: (42.409,97.599,95.410)
C4': (37.740,98.290,97.038)
C2': (39.523,99.016,95.655)
O2': (39.886,100.191,96.336)
N1: (40.362,96.668,95.628)
N3: (42.080,95.573,94.446)
N4: (41.700,93.532,93.501)
C6: (39.492,95.656,95.326)
C5: (39.883,94.599,94.615)
O3': (37.374,100.073,95.395)
OP1: (39.231,107.701,102.254)
OP2: (37.103,107.870,100.827)
C3': (38.858,102.030,100.909)
C1': (40.102,102.441,98.952)
C5': (38.605,104.508,101.451)
O4': (39.598,103.674,99.429)
C8: (42.318,103.052,100.098)
O2': (38.272,100.872,98.858)
C6: (44.785,101.556,98.098)
C5: (43.693,102.090,98.799)
C4: (42.442,101.805,98.305)
P: (38.020,107.067,101.680)
C4': (38.568,103.428,100.401)
C2': (39.345,101.315,99.662)
C2: (43.252,100.635,96.643)
N1: (44.521,100.825,96.996)
N3: (42.150,101.070,97.224)
N6: (46.058,101.720,98.461)
N7: (43.604,102.879,99.935)
N9: (41.555,102.438,99.137)
O5': (38.500,105.803,100.839)
O3': (37.669,101.431,101.394)
OP2: (37.103,107.870,100.827)
C3': (38.858,102.030,100.909)
C1': (40.102,102.441,98.952)
C5': (38.605,104.508,101.451)
O4': (39.598,103.674,99.429)
C8: (42.318,103.052,100.098)
O2': (38.272,100.872,98.858)
C6: (44.785,101.556,98.098)
C5: (43.693,102.090,98.799)
C4: (42.442,101.805,98.305)
P: (38.020,107.067,101.680)
C4': (38.568,103.428,100.401)
C2': (39.345,101.315,99.662)
C2: (43.252,100.635,96.643)
N1: (44.521,100.825,96.996)
N3: (42.150,101.070,97.224)
N6: (46.058,101.720,98.461)
N7: (43.604,102.879,99.935)
N9: (41.555,102.438,99.137)
O5': (38.500,105.803,100.839)
O3': (37.669,101.431,101.394)
Image (generated by PyMOL):