Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y38:Y31
Extra
PDB:
ATOM 1 O3' A A 37 30.804 6.137 48.328 1.00 37.64 O
ATOM 2 P C A 38 31.371 6.594 49.751 1.00 37.04 P
ATOM 3 OP1 C A 38 32.501 7.516 49.503 1.00 37.51 O
ATOM 4 OP2 C A 38 31.567 5.381 50.576 1.00 37.38 O
ATOM 5 O5' C A 38 30.156 7.421 50.384 1.00 36.98 O
ATOM 6 C5' C A 38 29.629 8.553 49.704 1.00 35.61 C
ATOM 7 C4' C A 38 28.316 8.965 50.334 1.00 34.89 C
ATOM 8 O4' C A 38 27.287 7.998 50.000 1.00 34.72 O
ATOM 9 C3' C A 38 28.326 8.969 51.854 1.00 34.30 C
ATOM 10 O3' C A 38 28.907 10.166 52.350 1.00 34.34 O
ATOM 11 C2' C A 38 26.833 8.876 52.141 1.00 33.76 C
ATOM 12 O2' C A 38 26.161 10.096 51.902 1.00 33.39 O
ATOM 13 C1' C A 38 26.413 7.838 51.104 1.00 33.18 C
ATOM 14 N1 C A 38 26.484 6.428 51.603 1.00 32.50 N
ATOM 15 C2 C A 38 25.403 5.896 52.318 1.00 32.26 C
ATOM 16 O2 C A 38 24.407 6.599 52.519 1.00 31.87 O
ATOM 17 N3 C A 38 25.474 4.619 52.769 1.00 32.14 N
ATOM 18 C4 C A 38 26.563 3.886 52.534 1.00 32.10 C
ATOM 19 N4 C A 38 26.583 2.630 52.994 1.00 32.14 N
ATOM 20 C5 C A 38 27.676 4.408 51.809 1.00 31.85 C
ATOM 21 C6 C A 38 27.595 5.669 51.371 1.00 32.15 C
ATOM 22 P C A 39 29.759 10.135 53.705 1.00 34.40 P
ATOM 23 OP1 C A 39 30.310 11.493 53.912 1.00 34.54 O
ATOM 24 OP2 C A 39 30.662 8.963 53.647 1.00 34.81 O
ATOM 25 O5' C A 39 28.660 9.857 54.832 1.00 33.77 O
TER
ATOM 1 O3' G B 30 22.036 18.128 52.372 1.00 33.31 O
ATOM 2 P A B 31 23.552 18.451 51.958 1.00 33.11 P
ATOM 3 OP1 A B 31 24.250 18.933 53.169 1.00 33.38 O
ATOM 4 OP2 A B 31 23.541 19.288 50.738 1.00 33.48 O
ATOM 5 O5' A B 31 24.138 17.014 51.561 1.00 33.28 O
ATOM 6 C5' A B 31 25.489 16.883 51.122 1.00 32.14 C
ATOM 7 C4' A B 31 25.916 15.424 51.080 1.00 31.78 C
ATOM 8 O4' A B 31 26.025 14.908 52.430 1.00 31.82 O
ATOM 9 C3' A B 31 24.950 14.470 50.390 1.00 31.71 C
ATOM 10 O3' A B 31 25.195 14.447 48.988 1.00 31.83 O
ATOM 11 C2' A B 31 25.314 13.134 51.029 1.00 31.24 C
ATOM 12 O2' A B 31 26.442 12.537 50.416 1.00 31.20 O
ATOM 13 C1' A B 31 25.665 13.538 52.457 1.00 30.82 C
ATOM 14 N9 A B 31 24.600 13.354 53.445 1.00 30.49 N
ATOM 15 C8 A B 31 23.985 14.337 54.168 1.00 30.28 C
ATOM 16 N7 A B 31 23.080 13.897 55.009 1.00 29.99 N
ATOM 17 C5 A B 31 23.108 12.524 54.835 1.00 29.97 C
ATOM 18 C6 A B 31 22.378 11.479 55.437 1.00 29.83 C
ATOM 19 N6 A B 31 21.443 11.681 56.373 1.00 29.48 N
ATOM 20 N1 A B 31 22.643 10.219 55.037 1.00 29.03 N
ATOM 21 C2 A B 31 23.575 10.025 54.096 1.00 29.91 C
ATOM 22 N3 A B 31 24.324 10.926 53.461 1.00 29.95 N
ATOM 23 C4 A B 31 24.039 12.170 53.877 1.00 29.82 C
ATOM 24 P G B 32 23.972 14.507 47.958 1.00 32.12 P
ATOM 25 OP1 G B 32 24.526 14.805 46.619 1.00 32.24 O
ATOM 26 OP2 G B 32 22.929 15.381 48.542 1.00 32.71 O
ATOM 27 O5' G B 32 23.424 13.006 47.958 1.00 31.36 O
TER
ATOM 2 P C A 38 31.371 6.594 49.751 1.00 37.04 P
ATOM 3 OP1 C A 38 32.501 7.516 49.503 1.00 37.51 O
ATOM 4 OP2 C A 38 31.567 5.381 50.576 1.00 37.38 O
ATOM 5 O5' C A 38 30.156 7.421 50.384 1.00 36.98 O
ATOM 6 C5' C A 38 29.629 8.553 49.704 1.00 35.61 C
ATOM 7 C4' C A 38 28.316 8.965 50.334 1.00 34.89 C
ATOM 8 O4' C A 38 27.287 7.998 50.000 1.00 34.72 O
ATOM 9 C3' C A 38 28.326 8.969 51.854 1.00 34.30 C
ATOM 10 O3' C A 38 28.907 10.166 52.350 1.00 34.34 O
ATOM 11 C2' C A 38 26.833 8.876 52.141 1.00 33.76 C
ATOM 12 O2' C A 38 26.161 10.096 51.902 1.00 33.39 O
ATOM 13 C1' C A 38 26.413 7.838 51.104 1.00 33.18 C
ATOM 14 N1 C A 38 26.484 6.428 51.603 1.00 32.50 N
ATOM 15 C2 C A 38 25.403 5.896 52.318 1.00 32.26 C
ATOM 16 O2 C A 38 24.407 6.599 52.519 1.00 31.87 O
ATOM 17 N3 C A 38 25.474 4.619 52.769 1.00 32.14 N
ATOM 18 C4 C A 38 26.563 3.886 52.534 1.00 32.10 C
ATOM 19 N4 C A 38 26.583 2.630 52.994 1.00 32.14 N
ATOM 20 C5 C A 38 27.676 4.408 51.809 1.00 31.85 C
ATOM 21 C6 C A 38 27.595 5.669 51.371 1.00 32.15 C
ATOM 22 P C A 39 29.759 10.135 53.705 1.00 34.40 P
ATOM 23 OP1 C A 39 30.310 11.493 53.912 1.00 34.54 O
ATOM 24 OP2 C A 39 30.662 8.963 53.647 1.00 34.81 O
ATOM 25 O5' C A 39 28.660 9.857 54.832 1.00 33.77 O
TER
ATOM 1 O3' G B 30 22.036 18.128 52.372 1.00 33.31 O
ATOM 2 P A B 31 23.552 18.451 51.958 1.00 33.11 P
ATOM 3 OP1 A B 31 24.250 18.933 53.169 1.00 33.38 O
ATOM 4 OP2 A B 31 23.541 19.288 50.738 1.00 33.48 O
ATOM 5 O5' A B 31 24.138 17.014 51.561 1.00 33.28 O
ATOM 6 C5' A B 31 25.489 16.883 51.122 1.00 32.14 C
ATOM 7 C4' A B 31 25.916 15.424 51.080 1.00 31.78 C
ATOM 8 O4' A B 31 26.025 14.908 52.430 1.00 31.82 O
ATOM 9 C3' A B 31 24.950 14.470 50.390 1.00 31.71 C
ATOM 10 O3' A B 31 25.195 14.447 48.988 1.00 31.83 O
ATOM 11 C2' A B 31 25.314 13.134 51.029 1.00 31.24 C
ATOM 12 O2' A B 31 26.442 12.537 50.416 1.00 31.20 O
ATOM 13 C1' A B 31 25.665 13.538 52.457 1.00 30.82 C
ATOM 14 N9 A B 31 24.600 13.354 53.445 1.00 30.49 N
ATOM 15 C8 A B 31 23.985 14.337 54.168 1.00 30.28 C
ATOM 16 N7 A B 31 23.080 13.897 55.009 1.00 29.99 N
ATOM 17 C5 A B 31 23.108 12.524 54.835 1.00 29.97 C
ATOM 18 C6 A B 31 22.378 11.479 55.437 1.00 29.83 C
ATOM 19 N6 A B 31 21.443 11.681 56.373 1.00 29.48 N
ATOM 20 N1 A B 31 22.643 10.219 55.037 1.00 29.03 N
ATOM 21 C2 A B 31 23.575 10.025 54.096 1.00 29.91 C
ATOM 22 N3 A B 31 24.324 10.926 53.461 1.00 29.95 N
ATOM 23 C4 A B 31 24.039 12.170 53.877 1.00 29.82 C
ATOM 24 P G B 32 23.972 14.507 47.958 1.00 32.12 P
ATOM 25 OP1 G B 32 24.526 14.805 46.619 1.00 32.24 O
ATOM 26 OP2 G B 32 22.929 15.381 48.542 1.00 32.71 O
ATOM 27 O5' G B 32 23.424 13.006 47.958 1.00 31.36 O
TER
Atoms:
C2: (25.403,5.896,52.318)
OP1: (32.501,7.516,49.503)
OP2: (31.567,5.381,50.576)
C4: (26.563,3.886,52.534)
O5': (30.156,7.421,50.384)
C3': (28.326,8.969,51.854)
C1': (26.413,7.838,51.104)
O4': (27.287,7.998,50.000)
C5': (29.629,8.553,49.704)
P: (31.371,6.594,49.751)
O2: (24.407,6.599,52.519)
C4': (28.316,8.965,50.334)
C2': (26.833,8.876,52.141)
O2': (26.161,10.096,51.902)
N1: (26.484,6.428,51.603)
N3: (25.474,4.619,52.769)
N4: (26.583,2.630,52.994)
C6: (27.595,5.669,51.371)
C5: (27.676,4.408,51.809)
O3': (28.907,10.166,52.350)
OP1: (32.501,7.516,49.503)
OP2: (31.567,5.381,50.576)
C4: (26.563,3.886,52.534)
O5': (30.156,7.421,50.384)
C3': (28.326,8.969,51.854)
C1': (26.413,7.838,51.104)
O4': (27.287,7.998,50.000)
C5': (29.629,8.553,49.704)
P: (31.371,6.594,49.751)
O2: (24.407,6.599,52.519)
C4': (28.316,8.965,50.334)
C2': (26.833,8.876,52.141)
O2': (26.161,10.096,51.902)
N1: (26.484,6.428,51.603)
N3: (25.474,4.619,52.769)
N4: (26.583,2.630,52.994)
C6: (27.595,5.669,51.371)
C5: (27.676,4.408,51.809)
O3': (28.907,10.166,52.350)
OP1: (24.250,18.933,53.169)
OP2: (23.541,19.288,50.738)
C3': (24.950,14.470,50.390)
C1': (25.665,13.538,52.457)
C5': (25.489,16.883,51.122)
O4': (26.025,14.908,52.430)
C8: (23.985,14.337,54.168)
O2': (26.442,12.537,50.416)
C6: (22.378,11.479,55.437)
C5: (23.108,12.524,54.835)
C4: (24.039,12.170,53.877)
P: (23.552,18.451,51.958)
C4': (25.916,15.424,51.080)
C2': (25.314,13.134,51.029)
C2: (23.575,10.025,54.096)
N1: (22.643,10.219,55.037)
N3: (24.324,10.926,53.461)
N6: (21.443,11.681,56.373)
N7: (23.080,13.897,55.009)
N9: (24.600,13.354,53.445)
O5': (24.138,17.014,51.561)
O3': (25.195,14.447,48.988)
OP2: (23.541,19.288,50.738)
C3': (24.950,14.470,50.390)
C1': (25.665,13.538,52.457)
C5': (25.489,16.883,51.122)
O4': (26.025,14.908,52.430)
C8: (23.985,14.337,54.168)
O2': (26.442,12.537,50.416)
C6: (22.378,11.479,55.437)
C5: (23.108,12.524,54.835)
C4: (24.039,12.170,53.877)
P: (23.552,18.451,51.958)
C4': (25.916,15.424,51.080)
C2': (25.314,13.134,51.029)
C2: (23.575,10.025,54.096)
N1: (22.643,10.219,55.037)
N3: (24.324,10.926,53.461)
N6: (21.443,11.681,56.373)
N7: (23.080,13.897,55.009)
N9: (24.600,13.354,53.445)
O5': (24.138,17.014,51.561)
O3': (25.195,14.447,48.988)
Image (generated by PyMOL):