Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01851:01914
Extra
PDB:
ATOM 1 O3' C A1850 122.590 106.782 92.048 1.00 53.81 O
ATOM 2 P C A1851 122.543 106.554 90.459 1.00 55.77 P
ATOM 3 OP1 C A1851 123.585 105.552 90.113 1.00 56.32 O
ATOM 4 OP2 C A1851 122.554 107.885 89.797 1.00 54.43 O
ATOM 5 O5' C A1851 121.107 105.918 90.192 1.00 55.52 O
ATOM 6 C5' C A1851 120.676 104.716 90.854 1.00 52.64 C
ATOM 7 C4' C A1851 119.272 104.366 90.420 1.00 52.83 C
ATOM 8 O4' C A1851 118.342 105.376 90.898 1.00 53.09 O
ATOM 9 C3' C A1851 119.047 104.362 88.919 1.00 53.57 C
ATOM 10 O3' C A1851 119.469 103.149 88.317 1.00 52.95 O
ATOM 11 C2' C A1851 117.542 104.549 88.813 1.00 54.26 C
ATOM 12 O2' C A1851 116.843 103.342 89.029 1.00 56.54 O
ATOM 13 C1' C A1851 117.274 105.514 89.971 1.00 53.71 C
ATOM 14 N1 C A1851 117.145 106.933 89.567 1.00 53.34 N
ATOM 15 C2 C A1851 115.910 107.387 89.072 1.00 53.10 C
ATOM 16 O2 C A1851 114.966 106.595 88.979 1.00 53.88 O
ATOM 17 N3 C A1851 115.778 108.678 88.709 1.00 52.61 N
ATOM 18 C4 C A1851 116.807 109.510 88.822 1.00 52.44 C
ATOM 19 N4 C A1851 116.622 110.777 88.453 1.00 53.01 N
ATOM 20 C5 C A1851 118.073 109.083 89.316 1.00 53.45 C
ATOM 21 C6 C A1851 118.198 107.797 89.672 1.00 53.52 C
ATOM 22 P C A1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 23 OP1 C A1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 24 OP2 C A1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 25 O5' C A1852 118.845 103.595 85.914 1.00 54.98 O
TER
ATOM 1 O3' U B1913 112.529 95.765 89.050 1.00 80.35 O
ATOM 2 P A B1914 114.074 95.325 89.062 1.00 76.39 P
ATOM 3 OP1 A B1914 114.369 94.649 87.771 1.00 76.29 O
ATOM 4 OP2 A B1914 114.344 94.620 90.347 1.00 76.00 O
ATOM 5 O5' A B1914 114.854 96.713 89.094 1.00 72.99 O
ATOM 6 C5' A B1914 116.113 96.878 88.419 1.00 67.54 C
ATOM 7 C4' A B1914 116.595 98.299 88.569 1.00 63.98 C
ATOM 8 O4' A B1914 115.607 99.196 88.004 1.00 62.71 O
ATOM 9 C3' A B1914 116.759 98.784 89.997 1.00 61.88 C
ATOM 10 O3' A B1914 118.026 98.402 90.515 1.00 62.45 O
ATOM 11 C2' A B1914 116.636 100.293 89.847 1.00 60.85 C
ATOM 12 O2' A B1914 117.832 100.885 89.380 1.00 57.46 O
ATOM 13 C1' A B1914 115.568 100.398 88.755 1.00 60.85 C
ATOM 14 N9 A B1914 114.192 100.617 89.214 1.00 59.87 N
ATOM 15 C8 A B1914 113.181 99.697 89.338 1.00 59.27 C
ATOM 16 N7 A B1914 112.037 100.212 89.716 1.00 58.10 N
ATOM 17 C5 A B1914 112.314 101.562 89.865 1.00 59.47 C
ATOM 18 C6 A B1914 111.514 102.658 90.241 1.00 59.83 C
ATOM 19 N6 A B1914 110.212 102.569 90.521 1.00 59.97 N
ATOM 20 N1 A B1914 112.106 103.868 90.312 1.00 59.40 N
ATOM 21 C2 A B1914 113.404 103.965 90.012 1.00 58.91 C
ATOM 22 N3 A B1914 114.253 103.017 89.634 1.00 58.76 N
ATOM 23 C4 A B1914 113.641 101.823 89.578 1.00 59.49 C
ATOM 24 P A B1915 118.189 98.097 92.084 1.00 63.90 P
ATOM 25 OP1 A B1915 119.504 97.422 92.277 1.00 63.51 O
ATOM 26 OP2 A B1915 116.941 97.430 92.549 1.00 63.48 O
ATOM 27 O5' A B1915 118.265 99.537 92.764 1.00 61.71 O
TER
ATOM 2 P C A1851 122.543 106.554 90.459 1.00 55.77 P
ATOM 3 OP1 C A1851 123.585 105.552 90.113 1.00 56.32 O
ATOM 4 OP2 C A1851 122.554 107.885 89.797 1.00 54.43 O
ATOM 5 O5' C A1851 121.107 105.918 90.192 1.00 55.52 O
ATOM 6 C5' C A1851 120.676 104.716 90.854 1.00 52.64 C
ATOM 7 C4' C A1851 119.272 104.366 90.420 1.00 52.83 C
ATOM 8 O4' C A1851 118.342 105.376 90.898 1.00 53.09 O
ATOM 9 C3' C A1851 119.047 104.362 88.919 1.00 53.57 C
ATOM 10 O3' C A1851 119.469 103.149 88.317 1.00 52.95 O
ATOM 11 C2' C A1851 117.542 104.549 88.813 1.00 54.26 C
ATOM 12 O2' C A1851 116.843 103.342 89.029 1.00 56.54 O
ATOM 13 C1' C A1851 117.274 105.514 89.971 1.00 53.71 C
ATOM 14 N1 C A1851 117.145 106.933 89.567 1.00 53.34 N
ATOM 15 C2 C A1851 115.910 107.387 89.072 1.00 53.10 C
ATOM 16 O2 C A1851 114.966 106.595 88.979 1.00 53.88 O
ATOM 17 N3 C A1851 115.778 108.678 88.709 1.00 52.61 N
ATOM 18 C4 C A1851 116.807 109.510 88.822 1.00 52.44 C
ATOM 19 N4 C A1851 116.622 110.777 88.453 1.00 53.01 N
ATOM 20 C5 C A1851 118.073 109.083 89.316 1.00 53.45 C
ATOM 21 C6 C A1851 118.198 107.797 89.672 1.00 53.52 C
ATOM 22 P C A1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 23 OP1 C A1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 24 OP2 C A1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 25 O5' C A1852 118.845 103.595 85.914 1.00 54.98 O
TER
ATOM 1 O3' U B1913 112.529 95.765 89.050 1.00 80.35 O
ATOM 2 P A B1914 114.074 95.325 89.062 1.00 76.39 P
ATOM 3 OP1 A B1914 114.369 94.649 87.771 1.00 76.29 O
ATOM 4 OP2 A B1914 114.344 94.620 90.347 1.00 76.00 O
ATOM 5 O5' A B1914 114.854 96.713 89.094 1.00 72.99 O
ATOM 6 C5' A B1914 116.113 96.878 88.419 1.00 67.54 C
ATOM 7 C4' A B1914 116.595 98.299 88.569 1.00 63.98 C
ATOM 8 O4' A B1914 115.607 99.196 88.004 1.00 62.71 O
ATOM 9 C3' A B1914 116.759 98.784 89.997 1.00 61.88 C
ATOM 10 O3' A B1914 118.026 98.402 90.515 1.00 62.45 O
ATOM 11 C2' A B1914 116.636 100.293 89.847 1.00 60.85 C
ATOM 12 O2' A B1914 117.832 100.885 89.380 1.00 57.46 O
ATOM 13 C1' A B1914 115.568 100.398 88.755 1.00 60.85 C
ATOM 14 N9 A B1914 114.192 100.617 89.214 1.00 59.87 N
ATOM 15 C8 A B1914 113.181 99.697 89.338 1.00 59.27 C
ATOM 16 N7 A B1914 112.037 100.212 89.716 1.00 58.10 N
ATOM 17 C5 A B1914 112.314 101.562 89.865 1.00 59.47 C
ATOM 18 C6 A B1914 111.514 102.658 90.241 1.00 59.83 C
ATOM 19 N6 A B1914 110.212 102.569 90.521 1.00 59.97 N
ATOM 20 N1 A B1914 112.106 103.868 90.312 1.00 59.40 N
ATOM 21 C2 A B1914 113.404 103.965 90.012 1.00 58.91 C
ATOM 22 N3 A B1914 114.253 103.017 89.634 1.00 58.76 N
ATOM 23 C4 A B1914 113.641 101.823 89.578 1.00 59.49 C
ATOM 24 P A B1915 118.189 98.097 92.084 1.00 63.90 P
ATOM 25 OP1 A B1915 119.504 97.422 92.277 1.00 63.51 O
ATOM 26 OP2 A B1915 116.941 97.430 92.549 1.00 63.48 O
ATOM 27 O5' A B1915 118.265 99.537 92.764 1.00 61.71 O
TER
Atoms:
C2: (115.910,107.387,89.072)
OP1: (123.585,105.552,90.113)
OP2: (122.554,107.885,89.797)
C4: (116.807,109.510,88.822)
O5': (121.107,105.918,90.192)
C3': (119.047,104.362,88.919)
C1': (117.274,105.514,89.971)
O4': (118.342,105.376,90.898)
C5': (120.676,104.716,90.854)
P: (122.543,106.554,90.459)
O2: (114.966,106.595,88.979)
C4': (119.272,104.366,90.420)
C2': (117.542,104.549,88.813)
O2': (116.843,103.342,89.029)
N1: (117.145,106.933,89.567)
N3: (115.778,108.678,88.709)
N4: (116.622,110.777,88.453)
C6: (118.198,107.797,89.672)
C5: (118.073,109.083,89.316)
O3': (119.469,103.149,88.317)
OP1: (123.585,105.552,90.113)
OP2: (122.554,107.885,89.797)
C4: (116.807,109.510,88.822)
O5': (121.107,105.918,90.192)
C3': (119.047,104.362,88.919)
C1': (117.274,105.514,89.971)
O4': (118.342,105.376,90.898)
C5': (120.676,104.716,90.854)
P: (122.543,106.554,90.459)
O2: (114.966,106.595,88.979)
C4': (119.272,104.366,90.420)
C2': (117.542,104.549,88.813)
O2': (116.843,103.342,89.029)
N1: (117.145,106.933,89.567)
N3: (115.778,108.678,88.709)
N4: (116.622,110.777,88.453)
C6: (118.198,107.797,89.672)
C5: (118.073,109.083,89.316)
O3': (119.469,103.149,88.317)
OP1: (114.369,94.649,87.771)
OP2: (114.344,94.620,90.347)
C3': (116.759,98.784,89.997)
C1': (115.568,100.398,88.755)
C5': (116.113,96.878,88.419)
O4': (115.607,99.196,88.004)
C8: (113.181,99.697,89.338)
O2': (117.832,100.885,89.380)
C6: (111.514,102.658,90.241)
C5: (112.314,101.562,89.865)
C4: (113.641,101.823,89.578)
P: (114.074,95.325,89.062)
C4': (116.595,98.299,88.569)
C2': (116.636,100.293,89.847)
C2: (113.404,103.965,90.012)
N1: (112.106,103.868,90.312)
N3: (114.253,103.017,89.634)
N6: (110.212,102.569,90.521)
N7: (112.037,100.212,89.716)
N9: (114.192,100.617,89.214)
O5': (114.854,96.713,89.094)
O3': (118.026,98.402,90.515)
OP2: (114.344,94.620,90.347)
C3': (116.759,98.784,89.997)
C1': (115.568,100.398,88.755)
C5': (116.113,96.878,88.419)
O4': (115.607,99.196,88.004)
C8: (113.181,99.697,89.338)
O2': (117.832,100.885,89.380)
C6: (111.514,102.658,90.241)
C5: (112.314,101.562,89.865)
C4: (113.641,101.823,89.578)
P: (114.074,95.325,89.062)
C4': (116.595,98.299,88.569)
C2': (116.636,100.293,89.847)
C2: (113.404,103.965,90.012)
N1: (112.106,103.868,90.312)
N3: (114.253,103.017,89.634)
N6: (110.212,102.569,90.521)
N7: (112.037,100.212,89.716)
N9: (114.192,100.617,89.214)
O5': (114.854,96.713,89.094)
O3': (118.026,98.402,90.515)
Image (generated by PyMOL):