Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A521:A487
Extra
PDB:
ATOM 1 O3' G A 520 -53.793 50.586 75.434 1.00 2.84 O
ATOM 2 P C A 521 -52.404 49.794 75.516 1.00 39.65 P
ATOM 3 OP1 C A 521 -51.965 49.431 74.143 1.00 40.20 O
ATOM 4 OP2 C A 521 -52.535 48.735 76.549 1.00 40.43 O
ATOM 5 O5' C A 521 -51.388 50.885 76.059 1.00 11.80 O
ATOM 6 C5' C A 521 -50.837 51.866 75.176 1.00 11.62 C
ATOM 7 C4' C A 521 -49.732 52.631 75.862 1.00 11.90 C
ATOM 8 O4' C A 521 -50.282 53.349 76.998 1.00 12.51 O
ATOM 9 C3' C A 521 -48.590 51.817 76.452 1.00 11.68 C
ATOM 10 O3' C A 521 -47.589 51.475 75.500 1.00 10.66 O
ATOM 11 C2' C A 521 -48.040 52.781 77.484 1.00 11.99 C
ATOM 12 O2' C A 521 -47.303 53.795 76.818 1.00 12.36 O
ATOM 13 C1' C A 521 -49.326 53.395 78.040 1.00 12.02 C
ATOM 14 N1 C A 521 -49.864 52.658 79.208 1.00 44.66 N
ATOM 15 C2 C A 521 -49.229 52.780 80.456 1.00 43.84 C
ATOM 16 O2 C A 521 -48.229 53.493 80.561 1.00 42.75 O
ATOM 17 N3 C A 521 -49.716 52.112 81.515 1.00 43.81 N
ATOM 18 C4 C A 521 -50.785 51.340 81.376 1.00 44.40 C
ATOM 19 N4 C A 521 -51.231 50.699 82.454 1.00 45.26 N
ATOM 20 C5 C A 521 -51.449 51.189 80.128 1.00 45.20 C
ATOM 21 C6 C A 521 -50.962 51.862 79.081 1.00 45.51 C
ATOM 22 P G A 522 -46.729 50.123 75.700 1.00 4.85 P
ATOM 23 OP1 G A 522 -45.900 49.924 74.475 1.00 26.69 O
ATOM 24 OP2 G A 522 -47.687 49.067 76.129 1.00 28.18 O
ATOM 25 O5' G A 522 -45.754 50.438 76.922 1.00 8.64 O
TER
ATOM 1 O3' C B 486 -45.056 62.126 75.054 1.00 17.96 O
ATOM 2 P A B 487 -45.449 61.569 73.596 1.00 36.64 P
ATOM 3 OP1 A B 487 -44.561 62.196 72.575 1.00 17.07 O
ATOM 4 OP2 A B 487 -46.936 61.670 73.452 1.00 16.76 O
ATOM 5 O5' A B 487 -45.032 60.034 73.716 1.00 42.80 O
ATOM 6 C5' A B 487 -45.361 59.096 72.687 1.00 43.52 C
ATOM 7 C4' A B 487 -46.292 58.044 73.225 1.00 43.03 C
ATOM 8 O4' A B 487 -45.545 57.105 74.041 1.00 42.54 O
ATOM 9 C3' A B 487 -47.382 58.572 74.138 1.00 44.67 C
ATOM 10 O3' A B 487 -48.416 59.282 73.431 1.00 46.36 O
ATOM 11 C2' A B 487 -47.694 57.360 75.013 1.00 44.53 C
ATOM 12 O2' A B 487 -48.530 56.387 74.429 1.00 45.36 O
ATOM 13 C1' A B 487 -46.300 56.753 75.187 1.00 43.37 C
ATOM 14 N9 A B 487 -45.615 57.313 76.356 1.00 32.34 N
ATOM 15 C8 A B 487 -44.821 58.431 76.385 1.00 31.65 C
ATOM 16 N7 A B 487 -44.355 58.717 77.573 1.00 30.07 N
ATOM 17 C5 A B 487 -44.870 57.719 78.383 1.00 30.32 C
ATOM 18 C6 A B 487 -44.741 57.463 79.749 1.00 30.21 C
ATOM 19 N6 A B 487 -44.034 58.228 80.575 1.00 29.90 N
ATOM 20 N1 A B 487 -45.368 56.387 80.248 1.00 30.06 N
ATOM 21 C2 A B 487 -46.086 55.632 79.421 1.00 31.04 C
ATOM 22 N3 A B 487 -46.294 55.771 78.120 1.00 33.49 N
ATOM 23 C4 A B 487 -45.645 56.846 77.651 1.00 32.16 C
ATOM 24 P A B 488 -49.618 58.499 72.709 1.00 46.02 P
ATOM 25 OP1 A B 488 -49.001 57.333 72.026 1.00 43.95 O
ATOM 26 OP2 A B 488 -50.407 59.477 71.912 1.00 41.88 O
ATOM 27 O5' A B 488 -50.561 58.006 73.895 1.00 15.66 O
TER
ATOM 2 P C A 521 -52.404 49.794 75.516 1.00 39.65 P
ATOM 3 OP1 C A 521 -51.965 49.431 74.143 1.00 40.20 O
ATOM 4 OP2 C A 521 -52.535 48.735 76.549 1.00 40.43 O
ATOM 5 O5' C A 521 -51.388 50.885 76.059 1.00 11.80 O
ATOM 6 C5' C A 521 -50.837 51.866 75.176 1.00 11.62 C
ATOM 7 C4' C A 521 -49.732 52.631 75.862 1.00 11.90 C
ATOM 8 O4' C A 521 -50.282 53.349 76.998 1.00 12.51 O
ATOM 9 C3' C A 521 -48.590 51.817 76.452 1.00 11.68 C
ATOM 10 O3' C A 521 -47.589 51.475 75.500 1.00 10.66 O
ATOM 11 C2' C A 521 -48.040 52.781 77.484 1.00 11.99 C
ATOM 12 O2' C A 521 -47.303 53.795 76.818 1.00 12.36 O
ATOM 13 C1' C A 521 -49.326 53.395 78.040 1.00 12.02 C
ATOM 14 N1 C A 521 -49.864 52.658 79.208 1.00 44.66 N
ATOM 15 C2 C A 521 -49.229 52.780 80.456 1.00 43.84 C
ATOM 16 O2 C A 521 -48.229 53.493 80.561 1.00 42.75 O
ATOM 17 N3 C A 521 -49.716 52.112 81.515 1.00 43.81 N
ATOM 18 C4 C A 521 -50.785 51.340 81.376 1.00 44.40 C
ATOM 19 N4 C A 521 -51.231 50.699 82.454 1.00 45.26 N
ATOM 20 C5 C A 521 -51.449 51.189 80.128 1.00 45.20 C
ATOM 21 C6 C A 521 -50.962 51.862 79.081 1.00 45.51 C
ATOM 22 P G A 522 -46.729 50.123 75.700 1.00 4.85 P
ATOM 23 OP1 G A 522 -45.900 49.924 74.475 1.00 26.69 O
ATOM 24 OP2 G A 522 -47.687 49.067 76.129 1.00 28.18 O
ATOM 25 O5' G A 522 -45.754 50.438 76.922 1.00 8.64 O
TER
ATOM 1 O3' C B 486 -45.056 62.126 75.054 1.00 17.96 O
ATOM 2 P A B 487 -45.449 61.569 73.596 1.00 36.64 P
ATOM 3 OP1 A B 487 -44.561 62.196 72.575 1.00 17.07 O
ATOM 4 OP2 A B 487 -46.936 61.670 73.452 1.00 16.76 O
ATOM 5 O5' A B 487 -45.032 60.034 73.716 1.00 42.80 O
ATOM 6 C5' A B 487 -45.361 59.096 72.687 1.00 43.52 C
ATOM 7 C4' A B 487 -46.292 58.044 73.225 1.00 43.03 C
ATOM 8 O4' A B 487 -45.545 57.105 74.041 1.00 42.54 O
ATOM 9 C3' A B 487 -47.382 58.572 74.138 1.00 44.67 C
ATOM 10 O3' A B 487 -48.416 59.282 73.431 1.00 46.36 O
ATOM 11 C2' A B 487 -47.694 57.360 75.013 1.00 44.53 C
ATOM 12 O2' A B 487 -48.530 56.387 74.429 1.00 45.36 O
ATOM 13 C1' A B 487 -46.300 56.753 75.187 1.00 43.37 C
ATOM 14 N9 A B 487 -45.615 57.313 76.356 1.00 32.34 N
ATOM 15 C8 A B 487 -44.821 58.431 76.385 1.00 31.65 C
ATOM 16 N7 A B 487 -44.355 58.717 77.573 1.00 30.07 N
ATOM 17 C5 A B 487 -44.870 57.719 78.383 1.00 30.32 C
ATOM 18 C6 A B 487 -44.741 57.463 79.749 1.00 30.21 C
ATOM 19 N6 A B 487 -44.034 58.228 80.575 1.00 29.90 N
ATOM 20 N1 A B 487 -45.368 56.387 80.248 1.00 30.06 N
ATOM 21 C2 A B 487 -46.086 55.632 79.421 1.00 31.04 C
ATOM 22 N3 A B 487 -46.294 55.771 78.120 1.00 33.49 N
ATOM 23 C4 A B 487 -45.645 56.846 77.651 1.00 32.16 C
ATOM 24 P A B 488 -49.618 58.499 72.709 1.00 46.02 P
ATOM 25 OP1 A B 488 -49.001 57.333 72.026 1.00 43.95 O
ATOM 26 OP2 A B 488 -50.407 59.477 71.912 1.00 41.88 O
ATOM 27 O5' A B 488 -50.561 58.006 73.895 1.00 15.66 O
TER
Atoms:
C2: (-49.229,52.780,80.456)
OP1: (-51.965,49.431,74.143)
OP2: (-52.535,48.735,76.549)
C4: (-50.785,51.340,81.376)
O5': (-51.388,50.885,76.059)
C3': (-48.590,51.817,76.452)
C1': (-49.326,53.395,78.040)
O4': (-50.282,53.349,76.998)
C5': (-50.837,51.866,75.176)
P: (-52.404,49.794,75.516)
O2: (-48.229,53.493,80.561)
C4': (-49.732,52.631,75.862)
C2': (-48.040,52.781,77.484)
O2': (-47.303,53.795,76.818)
N1: (-49.864,52.658,79.208)
N3: (-49.716,52.112,81.515)
N4: (-51.231,50.699,82.454)
C6: (-50.962,51.862,79.081)
C5: (-51.449,51.189,80.128)
O3': (-47.589,51.475,75.500)
OP1: (-51.965,49.431,74.143)
OP2: (-52.535,48.735,76.549)
C4: (-50.785,51.340,81.376)
O5': (-51.388,50.885,76.059)
C3': (-48.590,51.817,76.452)
C1': (-49.326,53.395,78.040)
O4': (-50.282,53.349,76.998)
C5': (-50.837,51.866,75.176)
P: (-52.404,49.794,75.516)
O2: (-48.229,53.493,80.561)
C4': (-49.732,52.631,75.862)
C2': (-48.040,52.781,77.484)
O2': (-47.303,53.795,76.818)
N1: (-49.864,52.658,79.208)
N3: (-49.716,52.112,81.515)
N4: (-51.231,50.699,82.454)
C6: (-50.962,51.862,79.081)
C5: (-51.449,51.189,80.128)
O3': (-47.589,51.475,75.500)
OP1: (-44.561,62.196,72.575)
OP2: (-46.936,61.670,73.452)
C3': (-47.382,58.572,74.138)
C1': (-46.300,56.753,75.187)
C5': (-45.361,59.096,72.687)
O4': (-45.545,57.105,74.041)
C8: (-44.821,58.431,76.385)
O2': (-48.530,56.387,74.429)
C6: (-44.741,57.463,79.749)
C5: (-44.870,57.719,78.383)
C4: (-45.645,56.846,77.651)
P: (-45.449,61.569,73.596)
C4': (-46.292,58.044,73.225)
C2': (-47.694,57.360,75.013)
C2: (-46.086,55.632,79.421)
N1: (-45.368,56.387,80.248)
N3: (-46.294,55.771,78.120)
N6: (-44.034,58.228,80.575)
N7: (-44.355,58.717,77.573)
N9: (-45.615,57.313,76.356)
O5': (-45.032,60.034,73.716)
O3': (-48.416,59.282,73.431)
OP2: (-46.936,61.670,73.452)
C3': (-47.382,58.572,74.138)
C1': (-46.300,56.753,75.187)
C5': (-45.361,59.096,72.687)
O4': (-45.545,57.105,74.041)
C8: (-44.821,58.431,76.385)
O2': (-48.530,56.387,74.429)
C6: (-44.741,57.463,79.749)
C5: (-44.870,57.719,78.383)
C4: (-45.645,56.846,77.651)
P: (-45.449,61.569,73.596)
C4': (-46.292,58.044,73.225)
C2': (-47.694,57.360,75.013)
C2: (-46.086,55.632,79.421)
N1: (-45.368,56.387,80.248)
N3: (-46.294,55.771,78.120)
N6: (-44.034,58.228,80.575)
N7: (-44.355,58.717,77.573)
N9: (-45.615,57.313,76.356)
O5': (-45.032,60.034,73.716)
O3': (-48.416,59.282,73.431)
Image (generated by PyMOL):