ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A1328:A1264

Extra

PDB:
ATOM 1 O3' U A1327 -96.247 127.010 71.276 1.00 36.92 O
ATOM 2 P C A1328 -97.268 125.863 71.746 1.00 22.85 P
ATOM 3 OP1 C A1328 -98.090 126.415 72.862 1.00 48.13 O
ATOM 4 OP2 C A1328 -96.497 124.614 71.955 1.00 49.16 O
ATOM 5 O5' C A1328 -98.202 125.646 70.475 1.00 32.23 O
ATOM 6 C5' C A1328 -99.223 126.601 70.151 1.00 32.82 C
ATOM 7 C4' C A1328 -100.065 126.110 68.995 1.00 32.94 C
ATOM 8 O4' C A1328 -99.303 126.141 67.763 1.00 33.74 O
ATOM 9 C3' C A1328 -100.610 124.694 69.085 1.00 32.30 C
ATOM 10 O3' C A1328 -101.809 124.647 69.833 1.00 31.42 O
ATOM 11 C2' C A1328 -100.884 124.352 67.631 1.00 34.16 C
ATOM 12 O2' C A1328 -102.155 124.819 67.232 1.00 34.62 O
ATOM 13 C1' C A1328 -99.767 125.116 66.907 1.00 35.76 C
ATOM 14 N1 C A1328 -98.629 124.262 66.547 1.00 35.12 N
ATOM 15 C2 C A1328 -98.472 123.876 65.217 1.00 35.76 C
ATOM 16 O2 C A1328 -99.266 124.297 64.373 1.00 35.83 O
ATOM 17 N3 C A1328 -97.455 123.059 64.882 1.00 36.23 N
ATOM 18 C4 C A1328 -96.603 122.635 65.819 1.00 36.97 C
ATOM 19 N4 C A1328 -95.613 121.807 65.445 1.00 37.87 N
ATOM 20 C5 C A1328 -96.726 123.033 67.182 1.00 37.75 C
ATOM 21 C6 C A1328 -97.744 123.840 67.498 1.00 36.79 C
ATOM 22 P G A1329 -102.274 123.266 70.497 1.00 78.70 P
ATOM 23 OP1 G A1329 -103.350 123.559 71.480 1.00 68.98 O
ATOM 24 OP2 G A1329 -101.054 122.557 70.946 1.00 72.72 O
ATOM 25 O5' G A1329 -102.904 122.458 69.276 1.00 54.50 O
TER

ATOM 1 O3' A B1263 -109.963 123.294 64.475 1.00 57.33 O
ATOM 2 P A B1264 -110.043 124.737 65.202 1.00 50.60 P
ATOM 3 OP1 A B1264 -110.978 124.590 66.359 1.00 32.82 O
ATOM 4 OP2 A B1264 -110.265 125.819 64.196 1.00 34.18 O
ATOM 5 O5' A B1264 -108.585 124.964 65.778 1.00 48.69 O
ATOM 6 C5' A B1264 -108.275 124.625 67.123 1.00 46.92 C
ATOM 7 C4' A B1264 -106.856 124.996 67.413 1.00 45.57 C
ATOM 8 O4' A B1264 -106.005 124.292 66.473 1.00 45.31 O
ATOM 9 C3' A B1264 -106.508 126.461 67.209 1.00 45.17 C
ATOM 10 O3' A B1264 -106.854 127.256 68.352 1.00 43.82 O
ATOM 11 C2' A B1264 -105.006 126.394 66.936 1.00 45.20 C
ATOM 12 O2' A B1264 -104.234 126.256 68.117 1.00 45.33 O
ATOM 13 C1' A B1264 -104.887 125.090 66.150 1.00 45.38 C
ATOM 14 N9 A B1264 -104.838 125.268 64.699 1.00 42.01 N
ATOM 15 C8 A B1264 -105.870 125.254 63.802 1.00 41.67 C
ATOM 16 N7 A B1264 -105.492 125.428 62.561 1.00 42.43 N
ATOM 17 C5 A B1264 -104.116 125.569 62.646 1.00 42.26 C
ATOM 18 C6 A B1264 -103.116 125.784 61.672 1.00 42.23 C
ATOM 19 N6 A B1264 -103.360 125.898 60.368 1.00 42.17 N
ATOM 20 N1 A B1264 -101.839 125.886 62.093 1.00 41.99 N
ATOM 21 C2 A B1264 -101.591 125.787 63.402 1.00 43.04 C
ATOM 22 N3 A B1264 -102.441 125.588 64.410 1.00 43.14 N
ATOM 23 C4 A B1264 -103.702 125.481 63.958 1.00 42.24 C
ATOM 24 P A B1265 -107.010 128.858 68.202 1.00 76.73 P
ATOM 25 OP1 A B1265 -107.391 129.380 69.545 1.00 78.20 O
ATOM 26 OP2 A B1265 -107.875 129.162 67.026 1.00 80.47 O
ATOM 27 O5' A B1265 -105.528 129.353 67.868 1.00 38.50 O
TER

Atoms:
C2: (-98.472,123.876,65.217)
OP1: (-98.090,126.415,72.862)
OP2: (-96.497,124.614,71.955)
C4: (-96.603,122.635,65.819)
O5': (-98.202,125.646,70.475)
C3': (-100.610,124.694,69.085)
C1': (-99.767,125.116,66.907)
O4': (-99.303,126.141,67.763)
C5': (-99.223,126.601,70.151)
P: (-97.268,125.863,71.746)
O2: (-99.266,124.297,64.373)
C4': (-100.065,126.110,68.995)
C2': (-100.884,124.352,67.631)
O2': (-102.155,124.819,67.232)
N1: (-98.629,124.262,66.547)
N3: (-97.455,123.059,64.882)
N4: (-95.613,121.807,65.445)
C6: (-97.744,123.840,67.498)
C5: (-96.726,123.033,67.182)
O3': (-101.809,124.647,69.833)
OP1: (-110.978,124.590,66.359)
OP2: (-110.265,125.819,64.196)
C3': (-106.508,126.461,67.209)
C1': (-104.887,125.090,66.150)
C5': (-108.275,124.625,67.123)
O4': (-106.005,124.292,66.473)
C8: (-105.870,125.254,63.802)
O2': (-104.234,126.256,68.117)
C6: (-103.116,125.784,61.672)
C5: (-104.116,125.569,62.646)
C4: (-103.702,125.481,63.958)
P: (-110.043,124.737,65.202)
C4': (-106.856,124.996,67.413)
C2': (-105.006,126.394,66.936)
C2: (-101.591,125.787,63.402)
N1: (-101.839,125.886,62.093)
N3: (-102.441,125.588,64.410)
N6: (-103.360,125.898,60.368)
N7: (-105.492,125.428,62.561)
N9: (-104.838,125.268,64.699)
O5': (-108.585,124.964,65.778)
O3': (-106.854,127.256,68.352)
Image (generated by PyMOL):
PyMOL image
show in jmol