Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1312:A1734
Extra
PDB:
ATOM 1 O3' C A1311 52.003 -22.357 -58.389 1.00 39.25 O
ATOM 2 P C A1312 53.001 -23.274 -59.265 1.00 53.44 P
ATOM 3 OP1 C A1312 54.033 -22.360 -59.836 1.00 61.35 O
ATOM 4 OP2 C A1312 52.173 -24.083 -60.187 1.00 57.95 O
ATOM 5 O5' C A1312 53.662 -24.221 -58.181 1.00 46.25 O
ATOM 6 C5' C A1312 54.309 -23.673 -57.051 1.00 38.60 C
ATOM 7 C4' C A1312 54.804 -24.748 -56.141 1.00 34.29 C
ATOM 8 O4' C A1312 53.691 -25.372 -55.460 1.00 43.33 O
ATOM 9 C3' C A1312 55.480 -25.917 -56.805 1.00 31.59 C
ATOM 10 O3' C A1312 56.773 -25.620 -57.251 1.00 32.56 O
ATOM 11 C2' C A1312 55.432 -26.948 -55.697 1.00 35.39 C
ATOM 12 O2' C A1312 56.332 -26.612 -54.664 1.00 33.65 O
ATOM 13 C1' C A1312 54.022 -26.718 -55.173 1.00 40.52 C
ATOM 14 N1 C A1312 53.063 -27.609 -55.841 1.00 36.98 N
ATOM 15 C2 C A1312 53.203 -28.953 -55.510 1.00 43.79 C
ATOM 16 O2 C A1312 54.074 -29.258 -54.693 1.00 44.01 O
ATOM 17 N3 C A1312 52.413 -29.891 -56.060 1.00 43.05 N
ATOM 18 C4 C A1312 51.517 -29.502 -56.934 1.00 38.21 C
ATOM 19 N4 C A1312 50.785 -30.467 -57.438 1.00 42.34 N
ATOM 20 C5 C A1312 51.337 -28.141 -57.306 1.00 38.30 C
ATOM 21 C6 C A1312 52.136 -27.218 -56.744 1.00 36.80 C
ATOM 22 P G A1313 57.592 -26.687 -58.125 1.00 47.56 P
ATOM 23 OP1 G A1313 58.951 -26.092 -58.344 1.00 41.22 O
ATOM 24 OP2 G A1313 56.764 -27.042 -59.306 1.00 47.34 O
ATOM 25 O5' G A1313 57.691 -27.947 -57.165 1.00 38.99 O
TER
ATOM 1 O3' U B1733 63.526 -25.839 -49.894 1.00 30.97 O
ATOM 2 P A B1734 62.615 -24.784 -49.141 1.00 41.56 P
ATOM 3 OP1 A B1734 63.397 -23.522 -49.035 1.00 56.57 O
ATOM 4 OP2 A B1734 62.143 -25.445 -47.901 1.00 46.82 O
ATOM 5 O5' A B1734 61.406 -24.583 -50.147 1.00 39.53 O
ATOM 6 C5' A B1734 61.625 -24.033 -51.434 1.00 41.77 C
ATOM 7 C4' A B1734 60.535 -24.423 -52.397 1.00 40.34 C
ATOM 8 O4' A B1734 60.317 -25.858 -52.338 1.00 39.79 O
ATOM 9 C3' A B1734 59.170 -23.802 -52.138 1.00 33.77 C
ATOM 10 O3' A B1734 59.041 -22.534 -52.752 1.00 29.12 O
ATOM 11 C2' A B1734 58.217 -24.822 -52.719 1.00 40.32 C
ATOM 12 O2' A B1734 58.119 -24.634 -54.116 1.00 42.03 O
ATOM 13 C1' A B1734 58.952 -26.140 -52.469 1.00 38.50 C
ATOM 14 N9 A B1734 58.504 -26.820 -51.248 1.00 33.71 N
ATOM 15 C8 A B1734 59.054 -26.740 -50.002 1.00 40.27 C
ATOM 16 N7 A B1734 58.471 -27.507 -49.108 1.00 39.45 N
ATOM 17 C5 A B1734 57.485 -28.137 -49.826 1.00 38.83 C
ATOM 18 C6 A B1734 56.532 -29.070 -49.445 1.00 37.24 C
ATOM 19 N6 A B1734 56.461 -29.503 -48.201 1.00 47.81 N
ATOM 20 N1 A B1734 55.670 -29.528 -50.363 1.00 35.80 N
ATOM 21 C2 A B1734 55.813 -29.053 -51.609 1.00 41.58 C
ATOM 22 N3 A B1734 56.676 -28.164 -52.113 1.00 36.24 N
ATOM 23 C4 A B1734 57.500 -27.739 -51.146 1.00 39.21 C
ATOM 24 P A B1735 58.256 -21.351 -52.023 1.00 41.20 P
ATOM 25 OP1 A B1735 58.476 -20.124 -52.825 1.00 45.59 O
ATOM 26 OP2 A B1735 58.676 -21.361 -50.601 1.00 44.67 O
ATOM 27 O5' A B1735 56.739 -21.808 -52.135 1.00 40.12 O
TER
ATOM 2 P C A1312 53.001 -23.274 -59.265 1.00 53.44 P
ATOM 3 OP1 C A1312 54.033 -22.360 -59.836 1.00 61.35 O
ATOM 4 OP2 C A1312 52.173 -24.083 -60.187 1.00 57.95 O
ATOM 5 O5' C A1312 53.662 -24.221 -58.181 1.00 46.25 O
ATOM 6 C5' C A1312 54.309 -23.673 -57.051 1.00 38.60 C
ATOM 7 C4' C A1312 54.804 -24.748 -56.141 1.00 34.29 C
ATOM 8 O4' C A1312 53.691 -25.372 -55.460 1.00 43.33 O
ATOM 9 C3' C A1312 55.480 -25.917 -56.805 1.00 31.59 C
ATOM 10 O3' C A1312 56.773 -25.620 -57.251 1.00 32.56 O
ATOM 11 C2' C A1312 55.432 -26.948 -55.697 1.00 35.39 C
ATOM 12 O2' C A1312 56.332 -26.612 -54.664 1.00 33.65 O
ATOM 13 C1' C A1312 54.022 -26.718 -55.173 1.00 40.52 C
ATOM 14 N1 C A1312 53.063 -27.609 -55.841 1.00 36.98 N
ATOM 15 C2 C A1312 53.203 -28.953 -55.510 1.00 43.79 C
ATOM 16 O2 C A1312 54.074 -29.258 -54.693 1.00 44.01 O
ATOM 17 N3 C A1312 52.413 -29.891 -56.060 1.00 43.05 N
ATOM 18 C4 C A1312 51.517 -29.502 -56.934 1.00 38.21 C
ATOM 19 N4 C A1312 50.785 -30.467 -57.438 1.00 42.34 N
ATOM 20 C5 C A1312 51.337 -28.141 -57.306 1.00 38.30 C
ATOM 21 C6 C A1312 52.136 -27.218 -56.744 1.00 36.80 C
ATOM 22 P G A1313 57.592 -26.687 -58.125 1.00 47.56 P
ATOM 23 OP1 G A1313 58.951 -26.092 -58.344 1.00 41.22 O
ATOM 24 OP2 G A1313 56.764 -27.042 -59.306 1.00 47.34 O
ATOM 25 O5' G A1313 57.691 -27.947 -57.165 1.00 38.99 O
TER
ATOM 1 O3' U B1733 63.526 -25.839 -49.894 1.00 30.97 O
ATOM 2 P A B1734 62.615 -24.784 -49.141 1.00 41.56 P
ATOM 3 OP1 A B1734 63.397 -23.522 -49.035 1.00 56.57 O
ATOM 4 OP2 A B1734 62.143 -25.445 -47.901 1.00 46.82 O
ATOM 5 O5' A B1734 61.406 -24.583 -50.147 1.00 39.53 O
ATOM 6 C5' A B1734 61.625 -24.033 -51.434 1.00 41.77 C
ATOM 7 C4' A B1734 60.535 -24.423 -52.397 1.00 40.34 C
ATOM 8 O4' A B1734 60.317 -25.858 -52.338 1.00 39.79 O
ATOM 9 C3' A B1734 59.170 -23.802 -52.138 1.00 33.77 C
ATOM 10 O3' A B1734 59.041 -22.534 -52.752 1.00 29.12 O
ATOM 11 C2' A B1734 58.217 -24.822 -52.719 1.00 40.32 C
ATOM 12 O2' A B1734 58.119 -24.634 -54.116 1.00 42.03 O
ATOM 13 C1' A B1734 58.952 -26.140 -52.469 1.00 38.50 C
ATOM 14 N9 A B1734 58.504 -26.820 -51.248 1.00 33.71 N
ATOM 15 C8 A B1734 59.054 -26.740 -50.002 1.00 40.27 C
ATOM 16 N7 A B1734 58.471 -27.507 -49.108 1.00 39.45 N
ATOM 17 C5 A B1734 57.485 -28.137 -49.826 1.00 38.83 C
ATOM 18 C6 A B1734 56.532 -29.070 -49.445 1.00 37.24 C
ATOM 19 N6 A B1734 56.461 -29.503 -48.201 1.00 47.81 N
ATOM 20 N1 A B1734 55.670 -29.528 -50.363 1.00 35.80 N
ATOM 21 C2 A B1734 55.813 -29.053 -51.609 1.00 41.58 C
ATOM 22 N3 A B1734 56.676 -28.164 -52.113 1.00 36.24 N
ATOM 23 C4 A B1734 57.500 -27.739 -51.146 1.00 39.21 C
ATOM 24 P A B1735 58.256 -21.351 -52.023 1.00 41.20 P
ATOM 25 OP1 A B1735 58.476 -20.124 -52.825 1.00 45.59 O
ATOM 26 OP2 A B1735 58.676 -21.361 -50.601 1.00 44.67 O
ATOM 27 O5' A B1735 56.739 -21.808 -52.135 1.00 40.12 O
TER
Atoms:
C2: (53.203,-28.953,-55.510)
OP1: (54.033,-22.360,-59.836)
OP2: (52.173,-24.083,-60.187)
C4: (51.517,-29.502,-56.934)
O5': (53.662,-24.221,-58.181)
C3': (55.480,-25.917,-56.805)
C1': (54.022,-26.718,-55.173)
O4': (53.691,-25.372,-55.460)
C5': (54.309,-23.673,-57.051)
P: (53.001,-23.274,-59.265)
O2: (54.074,-29.258,-54.693)
C4': (54.804,-24.748,-56.141)
C2': (55.432,-26.948,-55.697)
O2': (56.332,-26.612,-54.664)
N1: (53.063,-27.609,-55.841)
N3: (52.413,-29.891,-56.060)
N4: (50.785,-30.467,-57.438)
C6: (52.136,-27.218,-56.744)
C5: (51.337,-28.141,-57.306)
O3': (56.773,-25.620,-57.251)
OP1: (54.033,-22.360,-59.836)
OP2: (52.173,-24.083,-60.187)
C4: (51.517,-29.502,-56.934)
O5': (53.662,-24.221,-58.181)
C3': (55.480,-25.917,-56.805)
C1': (54.022,-26.718,-55.173)
O4': (53.691,-25.372,-55.460)
C5': (54.309,-23.673,-57.051)
P: (53.001,-23.274,-59.265)
O2: (54.074,-29.258,-54.693)
C4': (54.804,-24.748,-56.141)
C2': (55.432,-26.948,-55.697)
O2': (56.332,-26.612,-54.664)
N1: (53.063,-27.609,-55.841)
N3: (52.413,-29.891,-56.060)
N4: (50.785,-30.467,-57.438)
C6: (52.136,-27.218,-56.744)
C5: (51.337,-28.141,-57.306)
O3': (56.773,-25.620,-57.251)
OP1: (63.397,-23.522,-49.035)
OP2: (62.143,-25.445,-47.901)
C3': (59.170,-23.802,-52.138)
C1': (58.952,-26.140,-52.469)
C5': (61.625,-24.033,-51.434)
O4': (60.317,-25.858,-52.338)
C8: (59.054,-26.740,-50.002)
O2': (58.119,-24.634,-54.116)
C6: (56.532,-29.070,-49.445)
C5: (57.485,-28.137,-49.826)
C4: (57.500,-27.739,-51.146)
P: (62.615,-24.784,-49.141)
C4': (60.535,-24.423,-52.397)
C2': (58.217,-24.822,-52.719)
C2: (55.813,-29.053,-51.609)
N1: (55.670,-29.528,-50.363)
N3: (56.676,-28.164,-52.113)
N6: (56.461,-29.503,-48.201)
N7: (58.471,-27.507,-49.108)
N9: (58.504,-26.820,-51.248)
O5': (61.406,-24.583,-50.147)
O3': (59.041,-22.534,-52.752)
OP2: (62.143,-25.445,-47.901)
C3': (59.170,-23.802,-52.138)
C1': (58.952,-26.140,-52.469)
C5': (61.625,-24.033,-51.434)
O4': (60.317,-25.858,-52.338)
C8: (59.054,-26.740,-50.002)
O2': (58.119,-24.634,-54.116)
C6: (56.532,-29.070,-49.445)
C5: (57.485,-28.137,-49.826)
C4: (57.500,-27.739,-51.146)
P: (62.615,-24.784,-49.141)
C4': (60.535,-24.423,-52.397)
C2': (58.217,-24.822,-52.719)
C2: (55.813,-29.053,-51.609)
N1: (55.670,-29.528,-50.363)
N3: (56.676,-28.164,-52.113)
N6: (56.461,-29.503,-48.201)
N7: (58.471,-27.507,-49.108)
N9: (58.504,-26.820,-51.248)
O5': (61.406,-24.583,-50.147)
O3': (59.041,-22.534,-52.752)
Image (generated by PyMOL):