Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0626:0508
Extra
PDB:
ATOM 1 O3' C A 625 35.495 131.148 82.918 1.00 31.68 O
ATOM 2 P C A 626 35.321 130.047 81.772 1.00 32.35 P
ATOM 3 OP1 C A 626 34.177 129.201 82.191 1.00 33.09 O
ATOM 4 OP2 C A 626 36.633 129.422 81.474 1.00 30.88 O
ATOM 5 O5' C A 626 34.896 130.895 80.497 1.00 31.64 O
ATOM 6 C5' C A 626 33.641 131.581 80.478 1.00 31.54 C
ATOM 7 C4' C A 626 33.530 132.443 79.250 1.00 30.38 C
ATOM 8 O4' C A 626 34.535 133.484 79.288 1.00 31.13 O
ATOM 9 C3' C A 626 33.772 131.754 77.924 1.00 29.36 C
ATOM 10 O3' C A 626 32.619 131.041 77.512 1.00 29.15 O
ATOM 11 C2' C A 626 34.094 132.941 77.030 1.00 29.88 C
ATOM 12 O2' C A 626 32.946 133.702 76.721 1.00 29.83 O
ATOM 13 C1' C A 626 34.958 133.781 77.969 1.00 30.50 C
ATOM 14 N1 C A 626 36.408 133.501 77.859 1.00 31.16 N
ATOM 15 C2 C A 626 37.135 134.101 76.825 1.00 30.64 C
ATOM 16 O2 C A 626 36.542 134.832 76.020 1.00 33.40 O
ATOM 17 N3 C A 626 38.461 133.866 76.727 1.00 28.90 N
ATOM 18 C4 C A 626 39.060 133.068 77.607 1.00 29.27 C
ATOM 19 N4 C A 626 40.368 132.869 77.479 1.00 30.23 N
ATOM 20 C5 C A 626 38.346 132.437 78.660 1.00 29.13 C
ATOM 21 C6 C A 626 37.036 132.676 78.750 1.00 30.20 C
ATOM 22 P A A 627 32.744 129.894 76.395 1.00 31.82 P
ATOM 23 OP1 A A 627 31.407 129.268 76.301 1.00 34.64 O
ATOM 24 OP2 A A 627 33.928 129.043 76.660 1.00 31.63 O
ATOM 25 O5' A A 627 33.010 130.697 75.044 1.00 30.63 O
TER
ATOM 1 O3' A B 507 24.863 136.448 74.274 1.00 34.86 O
ATOM 2 P A B 508 25.217 137.101 75.690 1.00 35.63 P
ATOM 3 OP1 A B 508 24.137 136.714 76.630 1.00 33.78 O
ATOM 4 OP2 A B 508 25.527 138.541 75.474 1.00 33.67 O
ATOM 5 O5' A B 508 26.557 136.349 76.100 1.00 34.34 O
ATOM 6 C5' A B 508 26.553 134.937 76.369 1.00 34.07 C
ATOM 7 C4' A B 508 27.940 134.477 76.729 1.00 32.67 C
ATOM 8 O4' A B 508 28.810 134.678 75.587 1.00 34.79 O
ATOM 9 C3' A B 508 28.610 135.255 77.848 1.00 30.61 C
ATOM 10 O3' A B 508 28.204 134.783 79.121 1.00 28.92 O
ATOM 11 C2' A B 508 30.088 135.020 77.564 1.00 32.08 C
ATOM 12 O2' A B 508 30.559 133.756 77.980 1.00 31.12 O
ATOM 13 C1' A B 508 30.104 135.051 76.035 1.00 33.53 C
ATOM 14 N9 A B 508 30.439 136.358 75.467 1.00 33.10 N
ATOM 15 C8 A B 508 29.603 137.405 75.156 1.00 32.16 C
ATOM 16 N7 A B 508 30.220 138.432 74.624 1.00 32.50 N
ATOM 17 C5 A B 508 31.552 138.037 74.586 1.00 33.70 C
ATOM 18 C6 A B 508 32.721 138.673 74.119 1.00 33.32 C
ATOM 19 N6 A B 508 32.738 139.888 73.557 1.00 33.14 N
ATOM 20 N1 A B 508 33.887 138.004 74.242 1.00 32.69 N
ATOM 21 C2 A B 508 33.874 136.784 74.785 1.00 33.08 C
ATOM 22 N3 A B 508 32.848 136.079 75.246 1.00 33.19 N
ATOM 23 C4 A B 508 31.702 136.769 75.115 1.00 33.25 C
ATOM 24 P A B 509 28.338 135.738 80.405 1.00 31.42 P
ATOM 25 OP1 A B 509 27.956 134.950 81.597 1.00 29.72 O
ATOM 26 OP2 A B 509 27.660 137.031 80.128 1.00 30.25 O
ATOM 27 O5' A B 509 29.899 136.010 80.523 1.00 33.29 O
TER
ATOM 2 P C A 626 35.321 130.047 81.772 1.00 32.35 P
ATOM 3 OP1 C A 626 34.177 129.201 82.191 1.00 33.09 O
ATOM 4 OP2 C A 626 36.633 129.422 81.474 1.00 30.88 O
ATOM 5 O5' C A 626 34.896 130.895 80.497 1.00 31.64 O
ATOM 6 C5' C A 626 33.641 131.581 80.478 1.00 31.54 C
ATOM 7 C4' C A 626 33.530 132.443 79.250 1.00 30.38 C
ATOM 8 O4' C A 626 34.535 133.484 79.288 1.00 31.13 O
ATOM 9 C3' C A 626 33.772 131.754 77.924 1.00 29.36 C
ATOM 10 O3' C A 626 32.619 131.041 77.512 1.00 29.15 O
ATOM 11 C2' C A 626 34.094 132.941 77.030 1.00 29.88 C
ATOM 12 O2' C A 626 32.946 133.702 76.721 1.00 29.83 O
ATOM 13 C1' C A 626 34.958 133.781 77.969 1.00 30.50 C
ATOM 14 N1 C A 626 36.408 133.501 77.859 1.00 31.16 N
ATOM 15 C2 C A 626 37.135 134.101 76.825 1.00 30.64 C
ATOM 16 O2 C A 626 36.542 134.832 76.020 1.00 33.40 O
ATOM 17 N3 C A 626 38.461 133.866 76.727 1.00 28.90 N
ATOM 18 C4 C A 626 39.060 133.068 77.607 1.00 29.27 C
ATOM 19 N4 C A 626 40.368 132.869 77.479 1.00 30.23 N
ATOM 20 C5 C A 626 38.346 132.437 78.660 1.00 29.13 C
ATOM 21 C6 C A 626 37.036 132.676 78.750 1.00 30.20 C
ATOM 22 P A A 627 32.744 129.894 76.395 1.00 31.82 P
ATOM 23 OP1 A A 627 31.407 129.268 76.301 1.00 34.64 O
ATOM 24 OP2 A A 627 33.928 129.043 76.660 1.00 31.63 O
ATOM 25 O5' A A 627 33.010 130.697 75.044 1.00 30.63 O
TER
ATOM 1 O3' A B 507 24.863 136.448 74.274 1.00 34.86 O
ATOM 2 P A B 508 25.217 137.101 75.690 1.00 35.63 P
ATOM 3 OP1 A B 508 24.137 136.714 76.630 1.00 33.78 O
ATOM 4 OP2 A B 508 25.527 138.541 75.474 1.00 33.67 O
ATOM 5 O5' A B 508 26.557 136.349 76.100 1.00 34.34 O
ATOM 6 C5' A B 508 26.553 134.937 76.369 1.00 34.07 C
ATOM 7 C4' A B 508 27.940 134.477 76.729 1.00 32.67 C
ATOM 8 O4' A B 508 28.810 134.678 75.587 1.00 34.79 O
ATOM 9 C3' A B 508 28.610 135.255 77.848 1.00 30.61 C
ATOM 10 O3' A B 508 28.204 134.783 79.121 1.00 28.92 O
ATOM 11 C2' A B 508 30.088 135.020 77.564 1.00 32.08 C
ATOM 12 O2' A B 508 30.559 133.756 77.980 1.00 31.12 O
ATOM 13 C1' A B 508 30.104 135.051 76.035 1.00 33.53 C
ATOM 14 N9 A B 508 30.439 136.358 75.467 1.00 33.10 N
ATOM 15 C8 A B 508 29.603 137.405 75.156 1.00 32.16 C
ATOM 16 N7 A B 508 30.220 138.432 74.624 1.00 32.50 N
ATOM 17 C5 A B 508 31.552 138.037 74.586 1.00 33.70 C
ATOM 18 C6 A B 508 32.721 138.673 74.119 1.00 33.32 C
ATOM 19 N6 A B 508 32.738 139.888 73.557 1.00 33.14 N
ATOM 20 N1 A B 508 33.887 138.004 74.242 1.00 32.69 N
ATOM 21 C2 A B 508 33.874 136.784 74.785 1.00 33.08 C
ATOM 22 N3 A B 508 32.848 136.079 75.246 1.00 33.19 N
ATOM 23 C4 A B 508 31.702 136.769 75.115 1.00 33.25 C
ATOM 24 P A B 509 28.338 135.738 80.405 1.00 31.42 P
ATOM 25 OP1 A B 509 27.956 134.950 81.597 1.00 29.72 O
ATOM 26 OP2 A B 509 27.660 137.031 80.128 1.00 30.25 O
ATOM 27 O5' A B 509 29.899 136.010 80.523 1.00 33.29 O
TER
Atoms:
C2: (37.135,134.101,76.825)
OP1: (34.177,129.201,82.191)
OP2: (36.633,129.422,81.474)
C4: (39.060,133.068,77.607)
O5': (34.896,130.895,80.497)
C3': (33.772,131.754,77.924)
C1': (34.958,133.781,77.969)
O4': (34.535,133.484,79.288)
C5': (33.641,131.581,80.478)
P: (35.321,130.047,81.772)
O2: (36.542,134.832,76.020)
C4': (33.530,132.443,79.250)
C2': (34.094,132.941,77.030)
O2': (32.946,133.702,76.721)
N1: (36.408,133.501,77.859)
N3: (38.461,133.866,76.727)
N4: (40.368,132.869,77.479)
C6: (37.036,132.676,78.750)
C5: (38.346,132.437,78.660)
O3': (32.619,131.041,77.512)
OP1: (34.177,129.201,82.191)
OP2: (36.633,129.422,81.474)
C4: (39.060,133.068,77.607)
O5': (34.896,130.895,80.497)
C3': (33.772,131.754,77.924)
C1': (34.958,133.781,77.969)
O4': (34.535,133.484,79.288)
C5': (33.641,131.581,80.478)
P: (35.321,130.047,81.772)
O2: (36.542,134.832,76.020)
C4': (33.530,132.443,79.250)
C2': (34.094,132.941,77.030)
O2': (32.946,133.702,76.721)
N1: (36.408,133.501,77.859)
N3: (38.461,133.866,76.727)
N4: (40.368,132.869,77.479)
C6: (37.036,132.676,78.750)
C5: (38.346,132.437,78.660)
O3': (32.619,131.041,77.512)
OP1: (24.137,136.714,76.630)
OP2: (25.527,138.541,75.474)
C3': (28.610,135.255,77.848)
C1': (30.104,135.051,76.035)
C5': (26.553,134.937,76.369)
O4': (28.810,134.678,75.587)
C8: (29.603,137.405,75.156)
O2': (30.559,133.756,77.980)
C6: (32.721,138.673,74.119)
C5: (31.552,138.037,74.586)
C4: (31.702,136.769,75.115)
P: (25.217,137.101,75.690)
C4': (27.940,134.477,76.729)
C2': (30.088,135.020,77.564)
C2: (33.874,136.784,74.785)
N1: (33.887,138.004,74.242)
N3: (32.848,136.079,75.246)
N6: (32.738,139.888,73.557)
N7: (30.220,138.432,74.624)
N9: (30.439,136.358,75.467)
O5': (26.557,136.349,76.100)
O3': (28.204,134.783,79.121)
OP2: (25.527,138.541,75.474)
C3': (28.610,135.255,77.848)
C1': (30.104,135.051,76.035)
C5': (26.553,134.937,76.369)
O4': (28.810,134.678,75.587)
C8: (29.603,137.405,75.156)
O2': (30.559,133.756,77.980)
C6: (32.721,138.673,74.119)
C5: (31.552,138.037,74.586)
C4: (31.702,136.769,75.115)
P: (25.217,137.101,75.690)
C4': (27.940,134.477,76.729)
C2': (30.088,135.020,77.564)
C2: (33.874,136.784,74.785)
N1: (33.887,138.004,74.242)
N3: (32.848,136.079,75.246)
N6: (32.738,139.888,73.557)
N7: (30.220,138.432,74.624)
N9: (30.439,136.358,75.467)
O5': (26.557,136.349,76.100)
O3': (28.204,134.783,79.121)
Image (generated by PyMOL):