ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01028:01040

Extra

PDB:
ATOM 1 O3' C A1027 35.294 93.661 97.193 1.00 35.28 O
ATOM 2 P C A1028 35.160 94.647 95.943 1.00 34.81 P
ATOM 3 OP1 C A1028 33.921 95.431 96.146 1.00 32.55 O
ATOM 4 OP2 C A1028 35.338 93.844 94.710 1.00 29.41 O
ATOM 5 O5' C A1028 36.395 95.644 96.095 1.00 35.37 O
ATOM 6 C5' C A1028 36.417 96.632 97.138 1.00 38.39 C
ATOM 7 C4' C A1028 37.709 97.415 97.096 1.00 38.97 C
ATOM 8 O4' C A1028 38.829 96.543 97.407 1.00 37.91 O
ATOM 9 C3' C A1028 38.075 97.996 95.739 1.00 37.53 C
ATOM 10 O3' C A1028 37.411 99.215 95.469 1.00 37.74 O
ATOM 11 C2' C A1028 39.569 98.204 95.876 1.00 37.23 C
ATOM 12 O2' C A1028 39.834 99.346 96.660 1.00 38.40 O
ATOM 13 C1' C A1028 39.965 96.946 96.645 1.00 37.10 C
ATOM 14 N1 C A1028 40.349 95.834 95.755 1.00 35.30 N
ATOM 15 C2 C A1028 41.657 95.776 95.272 1.00 33.19 C
ATOM 16 O2 C A1028 42.428 96.713 95.515 1.00 36.91 O
ATOM 17 N3 C A1028 42.045 94.709 94.542 1.00 34.93 N
ATOM 18 C4 C A1028 41.167 93.735 94.264 1.00 35.78 C
ATOM 19 N4 C A1028 41.596 92.672 93.565 1.00 31.03 N
ATOM 20 C5 C A1028 39.816 93.800 94.694 1.00 34.97 C
ATOM 21 C6 C A1028 39.451 94.857 95.429 1.00 34.84 C
ATOM 22 P A A1029 37.057 99.593 93.953 1.00 37.34 P
ATOM 23 OP1 A A1029 36.441 100.943 93.983 1.00 36.20 O
ATOM 24 OP2 A A1029 36.312 98.459 93.363 1.00 35.55 O
ATOM 25 O5' A A1029 38.466 99.619 93.202 1.00 36.34 O
TER

ATOM 1 O3' C B1039 37.384 105.228 103.454 1.00 60.93 O
ATOM 2 P A B1040 38.127 106.008 102.271 1.00 61.23 P
ATOM 3 OP1 A B1040 39.427 106.492 102.808 1.00 60.21 O
ATOM 4 OP2 A B1040 37.165 106.962 101.665 1.00 59.42 O
ATOM 5 O5' A B1040 38.452 104.845 101.239 1.00 54.49 O
ATOM 6 C5' A B1040 38.762 103.533 101.715 1.00 47.29 C
ATOM 7 C4' A B1040 38.684 102.549 100.587 1.00 45.08 C
ATOM 8 O4' A B1040 39.699 102.872 99.611 1.00 40.92 O
ATOM 9 C3' A B1040 38.977 101.119 100.982 1.00 44.67 C
ATOM 10 O3' A B1040 37.775 100.534 101.477 1.00 48.58 O
ATOM 11 C2' A B1040 39.435 100.505 99.664 1.00 43.92 C
ATOM 12 O2' A B1040 38.360 100.167 98.819 1.00 48.55 O
ATOM 13 C1' A B1040 40.176 101.681 99.019 1.00 42.24 C
ATOM 14 N9 A B1040 41.632 101.656 99.144 1.00 38.31 N
ATOM 15 C8 A B1040 42.406 102.255 100.101 1.00 36.70 C
ATOM 16 N7 A B1040 43.689 102.075 99.928 1.00 37.18 N
ATOM 17 C5 A B1040 43.766 101.295 98.785 1.00 35.37 C
ATOM 18 C6 A B1040 44.852 100.744 98.086 1.00 34.19 C
ATOM 19 N6 A B1040 46.124 100.910 98.443 1.00 29.79 N
ATOM 20 N1 A B1040 44.581 99.999 96.992 1.00 34.66 N
ATOM 21 C2 A B1040 43.308 99.828 96.637 1.00 33.11 C
ATOM 22 N3 A B1040 42.206 100.295 97.212 1.00 33.46 N
ATOM 23 C4 A B1040 42.507 101.026 98.294 1.00 35.77 C
ATOM 24 P A B1041 37.624 100.187 103.048 1.00 44.27 P
ATOM 25 OP1 A B1041 36.226 100.524 103.411 1.00 46.84 O
ATOM 26 OP2 A B1041 38.734 100.786 103.819 1.00 46.52 O
ATOM 27 O5' A B1041 37.805 98.611 103.078 1.00 44.59 O
TER

Atoms:
C2: (41.657,95.776,95.272)
OP1: (33.921,95.431,96.146)
OP2: (35.338,93.844,94.710)
C4: (41.167,93.735,94.264)
O5': (36.395,95.644,96.095)
C3': (38.075,97.996,95.739)
C1': (39.965,96.946,96.645)
O4': (38.829,96.543,97.407)
C5': (36.417,96.632,97.138)
P: (35.160,94.647,95.943)
O2: (42.428,96.713,95.515)
C4': (37.709,97.415,97.096)
C2': (39.569,98.204,95.876)
O2': (39.834,99.346,96.660)
N1: (40.349,95.834,95.755)
N3: (42.045,94.709,94.542)
N4: (41.596,92.672,93.565)
C6: (39.451,94.857,95.429)
C5: (39.816,93.800,94.694)
O3': (37.411,99.215,95.469)
OP1: (39.427,106.492,102.808)
OP2: (37.165,106.962,101.665)
C3': (38.977,101.119,100.982)
C1': (40.176,101.681,99.019)
C5': (38.762,103.533,101.715)
O4': (39.699,102.872,99.611)
C8: (42.406,102.255,100.101)
O2': (38.360,100.167,98.819)
C6: (44.852,100.744,98.086)
C5: (43.766,101.295,98.785)
C4: (42.507,101.026,98.294)
P: (38.127,106.008,102.271)
C4': (38.684,102.549,100.587)
C2': (39.435,100.505,99.664)
C2: (43.308,99.828,96.637)
N1: (44.581,99.999,96.992)
N3: (42.206,100.295,97.212)
N6: (46.124,100.910,98.443)
N7: (43.689,102.075,99.928)
N9: (41.632,101.656,99.144)
O5': (38.452,104.845,101.239)
O3': (37.775,100.534,101.477)
Image (generated by PyMOL):
PyMOL image
show in jmol