Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0365:0230
Extra
PDB:
ATOM 1 O3' C A 364 95.413 98.935 1.476 1.00 61.60 O
ATOM 2 P C A 365 95.111 98.743 3.042 1.00 61.08 P
ATOM 3 OP1 C A 365 96.237 99.389 3.767 1.00 61.60 O
ATOM 4 OP2 C A 365 94.798 97.308 3.300 1.00 59.95 O
ATOM 5 O5' C A 365 93.799 99.618 3.266 1.00 57.50 O
ATOM 6 C5' C A 365 93.833 101.043 3.059 1.00 56.96 C
ATOM 7 C4' C A 365 92.518 101.666 3.451 1.00 55.94 C
ATOM 8 O4' C A 365 91.481 101.190 2.560 1.00 55.72 O
ATOM 9 C3' C A 365 92.013 101.315 4.839 1.00 55.83 C
ATOM 10 O3' C A 365 92.606 102.137 5.837 1.00 56.73 O
ATOM 11 C2' C A 365 90.512 101.528 4.703 1.00 55.05 C
ATOM 12 O2' C A 365 90.140 102.893 4.758 1.00 54.42 O
ATOM 13 C1' C A 365 90.272 101.020 3.282 1.00 54.58 C
ATOM 14 N1 C A 365 89.861 99.604 3.175 1.00 53.27 N
ATOM 15 C2 C A 365 88.508 99.271 3.351 1.00 52.99 C
ATOM 16 O2 C A 365 87.702 100.156 3.672 1.00 52.99 O
ATOM 17 N3 C A 365 88.116 97.995 3.171 1.00 52.33 N
ATOM 18 C4 C A 365 89.010 97.063 2.845 1.00 52.91 C
ATOM 19 N4 C A 365 88.568 95.822 2.646 1.00 53.07 N
ATOM 20 C5 C A 365 90.396 97.363 2.701 1.00 51.78 C
ATOM 21 C6 C A 365 90.774 98.630 2.877 1.00 51.60 C
ATOM 22 P A A 366 92.707 101.601 7.349 1.00 59.29 P
ATOM 23 OP1 A A 366 93.396 102.656 8.135 1.00 58.20 O
ATOM 24 OP2 A A 366 93.260 100.217 7.339 1.00 56.72 O
ATOM 25 O5' A A 366 91.184 101.535 7.824 1.00 57.31 O
TER
ATOM 1 O3' A B 229 89.671 111.447 7.050 1.00 48.89 O
ATOM 2 P A B 230 90.127 111.513 5.512 1.00 48.45 P
ATOM 3 OP1 A B 230 91.345 112.366 5.467 1.00 47.69 O
ATOM 4 OP2 A B 230 88.936 111.869 4.686 1.00 46.20 O
ATOM 5 O5' A B 230 90.524 110.012 5.166 1.00 45.99 O
ATOM 6 C5' A B 230 91.581 109.346 5.872 1.00 44.29 C
ATOM 7 C4' A B 230 91.517 107.858 5.618 1.00 44.77 C
ATOM 8 O4' A B 230 90.240 107.349 6.081 1.00 43.52 O
ATOM 9 C3' A B 230 91.538 107.419 4.165 1.00 45.88 C
ATOM 10 O3' A B 230 92.843 107.433 3.603 1.00 49.45 O
ATOM 11 C2' A B 230 90.957 106.016 4.255 1.00 43.87 C
ATOM 12 O2' A B 230 91.892 105.074 4.753 1.00 42.47 O
ATOM 13 C1' A B 230 89.861 106.228 5.296 1.00 42.20 C
ATOM 14 N9 A B 230 88.534 106.478 4.732 1.00 39.55 N
ATOM 15 C8 A B 230 87.950 107.675 4.400 1.00 38.65 C
ATOM 16 N7 A B 230 86.718 107.561 3.961 1.00 36.17 N
ATOM 17 C5 A B 230 86.477 106.197 3.998 1.00 37.02 C
ATOM 18 C6 A B 230 85.347 105.425 3.665 1.00 37.34 C
ATOM 19 N6 A B 230 84.201 105.943 3.222 1.00 36.73 N
ATOM 20 N1 A B 230 85.438 104.084 3.807 1.00 36.98 N
ATOM 21 C2 A B 230 86.593 103.564 4.259 1.00 39.32 C
ATOM 22 N3 A B 230 87.721 104.185 4.610 1.00 38.12 N
ATOM 23 C4 A B 230 87.594 105.515 4.455 1.00 38.59 C
ATOM 24 P A B 231 93.028 107.784 2.043 1.00 51.68 P
ATOM 25 OP1 A B 231 94.476 108.080 1.866 1.00 49.90 O
ATOM 26 OP2 A B 231 92.003 108.795 1.623 1.00 46.92 O
ATOM 27 O5' A B 231 92.669 106.420 1.301 1.00 50.34 O
TER
ATOM 2 P C A 365 95.111 98.743 3.042 1.00 61.08 P
ATOM 3 OP1 C A 365 96.237 99.389 3.767 1.00 61.60 O
ATOM 4 OP2 C A 365 94.798 97.308 3.300 1.00 59.95 O
ATOM 5 O5' C A 365 93.799 99.618 3.266 1.00 57.50 O
ATOM 6 C5' C A 365 93.833 101.043 3.059 1.00 56.96 C
ATOM 7 C4' C A 365 92.518 101.666 3.451 1.00 55.94 C
ATOM 8 O4' C A 365 91.481 101.190 2.560 1.00 55.72 O
ATOM 9 C3' C A 365 92.013 101.315 4.839 1.00 55.83 C
ATOM 10 O3' C A 365 92.606 102.137 5.837 1.00 56.73 O
ATOM 11 C2' C A 365 90.512 101.528 4.703 1.00 55.05 C
ATOM 12 O2' C A 365 90.140 102.893 4.758 1.00 54.42 O
ATOM 13 C1' C A 365 90.272 101.020 3.282 1.00 54.58 C
ATOM 14 N1 C A 365 89.861 99.604 3.175 1.00 53.27 N
ATOM 15 C2 C A 365 88.508 99.271 3.351 1.00 52.99 C
ATOM 16 O2 C A 365 87.702 100.156 3.672 1.00 52.99 O
ATOM 17 N3 C A 365 88.116 97.995 3.171 1.00 52.33 N
ATOM 18 C4 C A 365 89.010 97.063 2.845 1.00 52.91 C
ATOM 19 N4 C A 365 88.568 95.822 2.646 1.00 53.07 N
ATOM 20 C5 C A 365 90.396 97.363 2.701 1.00 51.78 C
ATOM 21 C6 C A 365 90.774 98.630 2.877 1.00 51.60 C
ATOM 22 P A A 366 92.707 101.601 7.349 1.00 59.29 P
ATOM 23 OP1 A A 366 93.396 102.656 8.135 1.00 58.20 O
ATOM 24 OP2 A A 366 93.260 100.217 7.339 1.00 56.72 O
ATOM 25 O5' A A 366 91.184 101.535 7.824 1.00 57.31 O
TER
ATOM 1 O3' A B 229 89.671 111.447 7.050 1.00 48.89 O
ATOM 2 P A B 230 90.127 111.513 5.512 1.00 48.45 P
ATOM 3 OP1 A B 230 91.345 112.366 5.467 1.00 47.69 O
ATOM 4 OP2 A B 230 88.936 111.869 4.686 1.00 46.20 O
ATOM 5 O5' A B 230 90.524 110.012 5.166 1.00 45.99 O
ATOM 6 C5' A B 230 91.581 109.346 5.872 1.00 44.29 C
ATOM 7 C4' A B 230 91.517 107.858 5.618 1.00 44.77 C
ATOM 8 O4' A B 230 90.240 107.349 6.081 1.00 43.52 O
ATOM 9 C3' A B 230 91.538 107.419 4.165 1.00 45.88 C
ATOM 10 O3' A B 230 92.843 107.433 3.603 1.00 49.45 O
ATOM 11 C2' A B 230 90.957 106.016 4.255 1.00 43.87 C
ATOM 12 O2' A B 230 91.892 105.074 4.753 1.00 42.47 O
ATOM 13 C1' A B 230 89.861 106.228 5.296 1.00 42.20 C
ATOM 14 N9 A B 230 88.534 106.478 4.732 1.00 39.55 N
ATOM 15 C8 A B 230 87.950 107.675 4.400 1.00 38.65 C
ATOM 16 N7 A B 230 86.718 107.561 3.961 1.00 36.17 N
ATOM 17 C5 A B 230 86.477 106.197 3.998 1.00 37.02 C
ATOM 18 C6 A B 230 85.347 105.425 3.665 1.00 37.34 C
ATOM 19 N6 A B 230 84.201 105.943 3.222 1.00 36.73 N
ATOM 20 N1 A B 230 85.438 104.084 3.807 1.00 36.98 N
ATOM 21 C2 A B 230 86.593 103.564 4.259 1.00 39.32 C
ATOM 22 N3 A B 230 87.721 104.185 4.610 1.00 38.12 N
ATOM 23 C4 A B 230 87.594 105.515 4.455 1.00 38.59 C
ATOM 24 P A B 231 93.028 107.784 2.043 1.00 51.68 P
ATOM 25 OP1 A B 231 94.476 108.080 1.866 1.00 49.90 O
ATOM 26 OP2 A B 231 92.003 108.795 1.623 1.00 46.92 O
ATOM 27 O5' A B 231 92.669 106.420 1.301 1.00 50.34 O
TER
Atoms:
C2: (88.508,99.271,3.351)
OP1: (96.237,99.389,3.767)
OP2: (94.798,97.308,3.300)
C4: (89.010,97.063,2.845)
O5': (93.799,99.618,3.266)
C3': (92.013,101.315,4.839)
C1': (90.272,101.020,3.282)
O4': (91.481,101.190,2.560)
C5': (93.833,101.043,3.059)
P: (95.111,98.743,3.042)
O2: (87.702,100.156,3.672)
C4': (92.518,101.666,3.451)
C2': (90.512,101.528,4.703)
O2': (90.140,102.893,4.758)
N1: (89.861,99.604,3.175)
N3: (88.116,97.995,3.171)
N4: (88.568,95.822,2.646)
C6: (90.774,98.630,2.877)
C5: (90.396,97.363,2.701)
O3': (92.606,102.137,5.837)
OP1: (96.237,99.389,3.767)
OP2: (94.798,97.308,3.300)
C4: (89.010,97.063,2.845)
O5': (93.799,99.618,3.266)
C3': (92.013,101.315,4.839)
C1': (90.272,101.020,3.282)
O4': (91.481,101.190,2.560)
C5': (93.833,101.043,3.059)
P: (95.111,98.743,3.042)
O2: (87.702,100.156,3.672)
C4': (92.518,101.666,3.451)
C2': (90.512,101.528,4.703)
O2': (90.140,102.893,4.758)
N1: (89.861,99.604,3.175)
N3: (88.116,97.995,3.171)
N4: (88.568,95.822,2.646)
C6: (90.774,98.630,2.877)
C5: (90.396,97.363,2.701)
O3': (92.606,102.137,5.837)
OP1: (91.345,112.366,5.467)
OP2: (88.936,111.869,4.686)
C3': (91.538,107.419,4.165)
C1': (89.861,106.228,5.296)
C5': (91.581,109.346,5.872)
O4': (90.240,107.349,6.081)
C8: (87.950,107.675,4.400)
O2': (91.892,105.074,4.753)
C6: (85.347,105.425,3.665)
C5: (86.477,106.197,3.998)
C4: (87.594,105.515,4.455)
P: (90.127,111.513,5.512)
C4': (91.517,107.858,5.618)
C2': (90.957,106.016,4.255)
C2: (86.593,103.564,4.259)
N1: (85.438,104.084,3.807)
N3: (87.721,104.185,4.610)
N6: (84.201,105.943,3.222)
N7: (86.718,107.561,3.961)
N9: (88.534,106.478,4.732)
O5': (90.524,110.012,5.166)
O3': (92.843,107.433,3.603)
OP2: (88.936,111.869,4.686)
C3': (91.538,107.419,4.165)
C1': (89.861,106.228,5.296)
C5': (91.581,109.346,5.872)
O4': (90.240,107.349,6.081)
C8: (87.950,107.675,4.400)
O2': (91.892,105.074,4.753)
C6: (85.347,105.425,3.665)
C5: (86.477,106.197,3.998)
C4: (87.594,105.515,4.455)
P: (90.127,111.513,5.512)
C4': (91.517,107.858,5.618)
C2': (90.957,106.016,4.255)
C2: (86.593,103.564,4.259)
N1: (85.438,104.084,3.807)
N3: (87.721,104.185,4.610)
N6: (84.201,105.943,3.222)
N7: (86.718,107.561,3.961)
N9: (88.534,106.478,4.732)
O5': (90.524,110.012,5.166)
O3': (92.843,107.433,3.603)
Image (generated by PyMOL):