Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B35:B28
Extra
PDB:
ATOM 1 O3' U A 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 2 P C A 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C A 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C A 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C A 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C A 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C A 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C A 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C A 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C A 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C A 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C A 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C A 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C A 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C A 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C A 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C A 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C A 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C A 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C A 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C A 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C A 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C A 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C A 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C A 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
ATOM 1 O3' G B 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 2 P A B 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A B 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A B 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A B 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A B 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A B 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A B 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A B 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A B 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A B 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A B 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A B 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A B 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A B 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A B 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A B 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A B 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A B 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A B 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A B 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A B 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
TER
ATOM 2 P C A 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C A 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C A 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C A 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C A 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C A 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C A 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C A 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C A 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C A 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C A 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C A 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C A 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C A 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C A 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C A 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C A 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C A 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C A 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C A 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C A 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C A 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C A 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C A 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
ATOM 1 O3' G B 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 2 P A B 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A B 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A B 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A B 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A B 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A B 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A B 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A B 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A B 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A B 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A B 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A B 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A B 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A B 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A B 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A B 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A B 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A B 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A B 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A B 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A B 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
TER
Atoms:
C2: (-19.293,42.391,-2.165)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
OP1: (-9.136,47.243,4.352)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
Image (generated by PyMOL):