Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1851:A1914
Extra
PDB:
ATOM 1 O3' C A1850 122.524 107.169 92.634 1.00 63.13 O
ATOM 2 P C A1851 122.419 106.973 91.062 1.00 64.55 P
ATOM 3 OP1 C A1851 123.424 105.950 90.702 1.00 65.85 O
ATOM 4 OP2 C A1851 122.482 108.321 90.436 1.00 64.08 O
ATOM 5 O5' C A1851 120.963 106.358 90.854 1.00 63.75 O
ATOM 6 C5' C A1851 120.642 105.048 91.341 1.00 61.72 C
ATOM 7 C4' C A1851 119.259 104.653 90.894 1.00 61.35 C
ATOM 8 O4' C A1851 118.277 105.574 91.423 1.00 61.24 O
ATOM 9 C3' C A1851 119.029 104.714 89.401 1.00 60.93 C
ATOM 10 O3' C A1851 119.461 103.510 88.835 1.00 61.09 O
ATOM 11 C2' C A1851 117.522 104.780 89.314 1.00 61.17 C
ATOM 12 O2' C A1851 116.988 103.492 89.528 1.00 62.39 O
ATOM 13 C1' C A1851 117.202 105.685 90.506 1.00 61.32 C
ATOM 14 N1 C A1851 117.022 107.101 90.135 1.00 60.85 N
ATOM 15 C2 C A1851 115.786 107.500 89.627 1.00 60.94 C
ATOM 16 O2 C A1851 114.884 106.662 89.527 1.00 61.48 O
ATOM 17 N3 C A1851 115.605 108.783 89.260 1.00 61.12 N
ATOM 18 C4 C A1851 116.604 109.659 89.388 1.00 61.40 C
ATOM 19 N4 C A1851 116.386 110.920 89.008 1.00 61.54 N
ATOM 20 C5 C A1851 117.870 109.282 89.911 1.00 61.87 C
ATOM 21 C6 C A1851 118.036 108.005 90.269 1.00 61.52 C
ATOM 22 P C A1852 120.095 103.517 87.383 1.00 62.86 P
ATOM 23 OP1 C A1852 120.480 102.101 87.172 1.00 63.87 O
ATOM 24 OP2 C A1852 121.127 104.585 87.347 1.00 62.92 O
ATOM 25 O5' C A1852 118.874 103.889 86.430 1.00 63.91 O
TER
ATOM 1 O3' U B1913 112.565 96.056 89.709 1.00 91.10 O
ATOM 2 P A B1914 114.101 95.586 89.640 1.00 87.12 P
ATOM 3 OP1 A B1914 114.237 95.067 88.261 1.00 88.44 O
ATOM 4 OP2 A B1914 114.504 94.737 90.800 1.00 87.10 O
ATOM 5 O5' A B1914 114.905 96.946 89.730 1.00 83.64 O
ATOM 6 C5' A B1914 116.109 97.124 88.998 1.00 78.94 C
ATOM 7 C4' A B1914 116.612 98.527 89.189 1.00 75.32 C
ATOM 8 O4' A B1914 115.715 99.454 88.533 1.00 74.67 O
ATOM 9 C3' A B1914 116.711 99.002 90.629 1.00 72.57 C
ATOM 10 O3' A B1914 117.973 98.637 91.183 1.00 72.89 O
ATOM 11 C2' A B1914 116.582 100.510 90.479 1.00 71.09 C
ATOM 12 O2' A B1914 117.821 101.106 90.156 1.00 68.78 O
ATOM 13 C1' A B1914 115.621 100.638 89.293 1.00 72.24 C
ATOM 14 N9 A B1914 114.222 100.811 89.684 1.00 72.01 N
ATOM 15 C8 A B1914 113.259 99.836 89.821 1.00 72.71 C
ATOM 16 N7 A B1914 112.087 100.297 90.178 1.00 71.77 N
ATOM 17 C5 A B1914 112.292 101.667 90.280 1.00 71.84 C
ATOM 18 C6 A B1914 111.441 102.716 90.614 1.00 72.28 C
ATOM 19 N6 A B1914 110.146 102.553 90.885 1.00 73.83 N
ATOM 20 N1 A B1914 111.961 103.960 90.653 1.00 71.27 N
ATOM 21 C2 A B1914 113.250 104.124 90.351 1.00 70.46 C
ATOM 22 N3 A B1914 114.149 103.218 90.003 1.00 70.81 N
ATOM 23 C4 A B1914 113.602 101.994 89.989 1.00 71.39 C
ATOM 24 P A B1915 118.123 98.397 92.768 1.00 73.55 P
ATOM 25 OP1 A B1915 119.429 97.753 93.052 1.00 73.96 O
ATOM 26 OP2 A B1915 116.861 97.772 93.263 1.00 73.06 O
ATOM 27 O5' A B1915 118.247 99.853 93.378 1.00 70.50 O
TER
ATOM 2 P C A1851 122.419 106.973 91.062 1.00 64.55 P
ATOM 3 OP1 C A1851 123.424 105.950 90.702 1.00 65.85 O
ATOM 4 OP2 C A1851 122.482 108.321 90.436 1.00 64.08 O
ATOM 5 O5' C A1851 120.963 106.358 90.854 1.00 63.75 O
ATOM 6 C5' C A1851 120.642 105.048 91.341 1.00 61.72 C
ATOM 7 C4' C A1851 119.259 104.653 90.894 1.00 61.35 C
ATOM 8 O4' C A1851 118.277 105.574 91.423 1.00 61.24 O
ATOM 9 C3' C A1851 119.029 104.714 89.401 1.00 60.93 C
ATOM 10 O3' C A1851 119.461 103.510 88.835 1.00 61.09 O
ATOM 11 C2' C A1851 117.522 104.780 89.314 1.00 61.17 C
ATOM 12 O2' C A1851 116.988 103.492 89.528 1.00 62.39 O
ATOM 13 C1' C A1851 117.202 105.685 90.506 1.00 61.32 C
ATOM 14 N1 C A1851 117.022 107.101 90.135 1.00 60.85 N
ATOM 15 C2 C A1851 115.786 107.500 89.627 1.00 60.94 C
ATOM 16 O2 C A1851 114.884 106.662 89.527 1.00 61.48 O
ATOM 17 N3 C A1851 115.605 108.783 89.260 1.00 61.12 N
ATOM 18 C4 C A1851 116.604 109.659 89.388 1.00 61.40 C
ATOM 19 N4 C A1851 116.386 110.920 89.008 1.00 61.54 N
ATOM 20 C5 C A1851 117.870 109.282 89.911 1.00 61.87 C
ATOM 21 C6 C A1851 118.036 108.005 90.269 1.00 61.52 C
ATOM 22 P C A1852 120.095 103.517 87.383 1.00 62.86 P
ATOM 23 OP1 C A1852 120.480 102.101 87.172 1.00 63.87 O
ATOM 24 OP2 C A1852 121.127 104.585 87.347 1.00 62.92 O
ATOM 25 O5' C A1852 118.874 103.889 86.430 1.00 63.91 O
TER
ATOM 1 O3' U B1913 112.565 96.056 89.709 1.00 91.10 O
ATOM 2 P A B1914 114.101 95.586 89.640 1.00 87.12 P
ATOM 3 OP1 A B1914 114.237 95.067 88.261 1.00 88.44 O
ATOM 4 OP2 A B1914 114.504 94.737 90.800 1.00 87.10 O
ATOM 5 O5' A B1914 114.905 96.946 89.730 1.00 83.64 O
ATOM 6 C5' A B1914 116.109 97.124 88.998 1.00 78.94 C
ATOM 7 C4' A B1914 116.612 98.527 89.189 1.00 75.32 C
ATOM 8 O4' A B1914 115.715 99.454 88.533 1.00 74.67 O
ATOM 9 C3' A B1914 116.711 99.002 90.629 1.00 72.57 C
ATOM 10 O3' A B1914 117.973 98.637 91.183 1.00 72.89 O
ATOM 11 C2' A B1914 116.582 100.510 90.479 1.00 71.09 C
ATOM 12 O2' A B1914 117.821 101.106 90.156 1.00 68.78 O
ATOM 13 C1' A B1914 115.621 100.638 89.293 1.00 72.24 C
ATOM 14 N9 A B1914 114.222 100.811 89.684 1.00 72.01 N
ATOM 15 C8 A B1914 113.259 99.836 89.821 1.00 72.71 C
ATOM 16 N7 A B1914 112.087 100.297 90.178 1.00 71.77 N
ATOM 17 C5 A B1914 112.292 101.667 90.280 1.00 71.84 C
ATOM 18 C6 A B1914 111.441 102.716 90.614 1.00 72.28 C
ATOM 19 N6 A B1914 110.146 102.553 90.885 1.00 73.83 N
ATOM 20 N1 A B1914 111.961 103.960 90.653 1.00 71.27 N
ATOM 21 C2 A B1914 113.250 104.124 90.351 1.00 70.46 C
ATOM 22 N3 A B1914 114.149 103.218 90.003 1.00 70.81 N
ATOM 23 C4 A B1914 113.602 101.994 89.989 1.00 71.39 C
ATOM 24 P A B1915 118.123 98.397 92.768 1.00 73.55 P
ATOM 25 OP1 A B1915 119.429 97.753 93.052 1.00 73.96 O
ATOM 26 OP2 A B1915 116.861 97.772 93.263 1.00 73.06 O
ATOM 27 O5' A B1915 118.247 99.853 93.378 1.00 70.50 O
TER
Atoms:
C2: (115.786,107.500,89.627)
OP1: (123.424,105.950,90.702)
OP2: (122.482,108.321,90.436)
C4: (116.604,109.659,89.388)
O5': (120.963,106.358,90.854)
C3': (119.029,104.714,89.401)
C1': (117.202,105.685,90.506)
O4': (118.277,105.574,91.423)
C5': (120.642,105.048,91.341)
P: (122.419,106.973,91.062)
O2: (114.884,106.662,89.527)
C4': (119.259,104.653,90.894)
C2': (117.522,104.780,89.314)
O2': (116.988,103.492,89.528)
N1: (117.022,107.101,90.135)
N3: (115.605,108.783,89.260)
N4: (116.386,110.920,89.008)
C6: (118.036,108.005,90.269)
C5: (117.870,109.282,89.911)
O3': (119.461,103.510,88.835)
OP1: (123.424,105.950,90.702)
OP2: (122.482,108.321,90.436)
C4: (116.604,109.659,89.388)
O5': (120.963,106.358,90.854)
C3': (119.029,104.714,89.401)
C1': (117.202,105.685,90.506)
O4': (118.277,105.574,91.423)
C5': (120.642,105.048,91.341)
P: (122.419,106.973,91.062)
O2: (114.884,106.662,89.527)
C4': (119.259,104.653,90.894)
C2': (117.522,104.780,89.314)
O2': (116.988,103.492,89.528)
N1: (117.022,107.101,90.135)
N3: (115.605,108.783,89.260)
N4: (116.386,110.920,89.008)
C6: (118.036,108.005,90.269)
C5: (117.870,109.282,89.911)
O3': (119.461,103.510,88.835)
OP1: (114.237,95.067,88.261)
OP2: (114.504,94.737,90.800)
C3': (116.711,99.002,90.629)
C1': (115.621,100.638,89.293)
C5': (116.109,97.124,88.998)
O4': (115.715,99.454,88.533)
C8: (113.259,99.836,89.821)
O2': (117.821,101.106,90.156)
C6: (111.441,102.716,90.614)
C5: (112.292,101.667,90.280)
C4: (113.602,101.994,89.989)
P: (114.101,95.586,89.640)
C4': (116.612,98.527,89.189)
C2': (116.582,100.510,90.479)
C2: (113.250,104.124,90.351)
N1: (111.961,103.960,90.653)
N3: (114.149,103.218,90.003)
N6: (110.146,102.553,90.885)
N7: (112.087,100.297,90.178)
N9: (114.222,100.811,89.684)
O5': (114.905,96.946,89.730)
O3': (117.973,98.637,91.183)
OP2: (114.504,94.737,90.800)
C3': (116.711,99.002,90.629)
C1': (115.621,100.638,89.293)
C5': (116.109,97.124,88.998)
O4': (115.715,99.454,88.533)
C8: (113.259,99.836,89.821)
O2': (117.821,101.106,90.156)
C6: (111.441,102.716,90.614)
C5: (112.292,101.667,90.280)
C4: (113.602,101.994,89.989)
P: (114.101,95.586,89.640)
C4': (116.612,98.527,89.189)
C2': (116.582,100.510,90.479)
C2: (113.250,104.124,90.351)
N1: (111.961,103.960,90.653)
N3: (114.149,103.218,90.003)
N6: (110.146,102.553,90.885)
N7: (112.087,100.297,90.178)
N9: (114.222,100.811,89.684)
O5': (114.905,96.946,89.730)
O3': (117.973,98.637,91.183)
Image (generated by PyMOL):