Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A35:A28
Extra
PDB:
ATOM 1 O3' U A 34 -20.702 -9.603 29.123 1.00 60.61 O
ATOM 2 P C A 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 3 OP1 C A 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 4 OP2 C A 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 5 O5' C A 35 -18.179 -9.927 29.617 1.00 56.71 O
ATOM 6 C5' C A 35 -17.102 -10.338 30.452 1.00 53.01 C
ATOM 7 C4' C A 35 -15.998 -10.724 29.486 1.00 52.07 C
ATOM 8 O4' C A 35 -16.386 -11.972 28.846 1.00 51.35 O
ATOM 9 C3' C A 35 -15.882 -9.757 28.312 1.00 53.46 C
ATOM 10 O3' C A 35 -15.064 -8.589 28.576 1.00 51.57 O
ATOM 11 C2' C A 35 -15.252 -10.642 27.245 1.00 48.54 C
ATOM 12 O2' C A 35 -13.884 -10.868 27.476 1.00 48.59 O
ATOM 13 C1' C A 35 -15.947 -11.962 27.496 1.00 48.94 C
ATOM 14 N1 C A 35 -17.068 -12.222 26.547 1.00 49.68 N
ATOM 15 C2 C A 35 -16.735 -12.506 25.225 1.00 44.34 C
ATOM 16 O2 C A 35 -15.545 -12.514 24.888 1.00 39.39 O
ATOM 17 N3 C A 35 -17.737 -12.754 24.365 1.00 44.69 N
ATOM 18 C4 C A 35 -19.015 -12.730 24.765 1.00 43.11 C
ATOM 19 N4 C A 35 -19.958 -13.011 23.848 1.00 39.86 N
ATOM 20 C5 C A 35 -19.375 -12.456 26.107 1.00 48.58 C
ATOM 21 C6 C A 35 -18.372 -12.208 26.955 1.00 50.35 C
ATOM 22 P C A 36 -15.438 -7.198 27.810 1.00 58.59 P
ATOM 23 OP1 C A 36 -14.643 -6.174 28.545 1.00 54.61 O
ATOM 24 OP2 C A 36 -16.895 -7.034 27.594 1.00 55.63 O
ATOM 25 O5' C A 36 -14.854 -7.335 26.339 1.00 49.80 O
TER
ATOM 1 O3' G B 27 -4.901 -10.657 29.016 1.00 53.00 O
ATOM 2 P A B 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A B 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A B 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A B 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A B 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A B 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A B 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A B 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A B 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A B 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A B 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A B 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A B 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A B 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A B 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A B 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A B 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A B 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A B 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A B 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A B 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A B 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G B 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G B 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G B 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G B 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
ATOM 2 P C A 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 3 OP1 C A 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 4 OP2 C A 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 5 O5' C A 35 -18.179 -9.927 29.617 1.00 56.71 O
ATOM 6 C5' C A 35 -17.102 -10.338 30.452 1.00 53.01 C
ATOM 7 C4' C A 35 -15.998 -10.724 29.486 1.00 52.07 C
ATOM 8 O4' C A 35 -16.386 -11.972 28.846 1.00 51.35 O
ATOM 9 C3' C A 35 -15.882 -9.757 28.312 1.00 53.46 C
ATOM 10 O3' C A 35 -15.064 -8.589 28.576 1.00 51.57 O
ATOM 11 C2' C A 35 -15.252 -10.642 27.245 1.00 48.54 C
ATOM 12 O2' C A 35 -13.884 -10.868 27.476 1.00 48.59 O
ATOM 13 C1' C A 35 -15.947 -11.962 27.496 1.00 48.94 C
ATOM 14 N1 C A 35 -17.068 -12.222 26.547 1.00 49.68 N
ATOM 15 C2 C A 35 -16.735 -12.506 25.225 1.00 44.34 C
ATOM 16 O2 C A 35 -15.545 -12.514 24.888 1.00 39.39 O
ATOM 17 N3 C A 35 -17.737 -12.754 24.365 1.00 44.69 N
ATOM 18 C4 C A 35 -19.015 -12.730 24.765 1.00 43.11 C
ATOM 19 N4 C A 35 -19.958 -13.011 23.848 1.00 39.86 N
ATOM 20 C5 C A 35 -19.375 -12.456 26.107 1.00 48.58 C
ATOM 21 C6 C A 35 -18.372 -12.208 26.955 1.00 50.35 C
ATOM 22 P C A 36 -15.438 -7.198 27.810 1.00 58.59 P
ATOM 23 OP1 C A 36 -14.643 -6.174 28.545 1.00 54.61 O
ATOM 24 OP2 C A 36 -16.895 -7.034 27.594 1.00 55.63 O
ATOM 25 O5' C A 36 -14.854 -7.335 26.339 1.00 49.80 O
TER
ATOM 1 O3' G B 27 -4.901 -10.657 29.016 1.00 53.00 O
ATOM 2 P A B 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A B 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A B 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A B 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A B 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A B 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A B 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A B 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A B 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A B 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A B 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A B 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A B 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A B 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A B 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A B 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A B 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A B 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A B 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A B 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A B 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A B 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G B 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G B 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G B 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G B 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
Atoms:
C2: (-16.735,-12.506,25.225)
OP1: (-19.890,-10.689,31.168)
OP2: (-19.515,-8.144,30.715)
C4: (-19.015,-12.730,24.765)
O5': (-18.179,-9.927,29.617)
C3': (-15.882,-9.757,28.312)
C1': (-15.947,-11.962,27.496)
O4': (-16.386,-11.972,28.846)
C5': (-17.102,-10.338,30.452)
P: (-19.586,-9.537,30.273)
O2: (-15.545,-12.514,24.888)
C4': (-15.998,-10.724,29.486)
C2': (-15.252,-10.642,27.245)
O2': (-13.884,-10.868,27.476)
N1: (-17.068,-12.222,26.547)
N3: (-17.737,-12.754,24.365)
N4: (-19.958,-13.011,23.848)
C6: (-18.372,-12.208,26.955)
C5: (-19.375,-12.456,26.107)
O3': (-15.064,-8.589,28.576)
OP1: (-19.890,-10.689,31.168)
OP2: (-19.515,-8.144,30.715)
C4: (-19.015,-12.730,24.765)
O5': (-18.179,-9.927,29.617)
C3': (-15.882,-9.757,28.312)
C1': (-15.947,-11.962,27.496)
O4': (-16.386,-11.972,28.846)
C5': (-17.102,-10.338,30.452)
P: (-19.586,-9.537,30.273)
O2: (-15.545,-12.514,24.888)
C4': (-15.998,-10.724,29.486)
C2': (-15.252,-10.642,27.245)
O2': (-13.884,-10.868,27.476)
N1: (-17.068,-12.222,26.547)
N3: (-17.737,-12.754,24.365)
N4: (-19.958,-13.011,23.848)
C6: (-18.372,-12.208,26.955)
C5: (-19.375,-12.456,26.107)
O3': (-15.064,-8.589,28.576)
OP1: (-4.841,-8.250,29.817)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
Image (generated by PyMOL):