Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0365:0230
Extra
PDB:
ATOM 1 O3' C A 364 95.739 99.307 1.762 1.00 76.99 O
ATOM 2 P C A 365 95.357 99.126 3.314 1.00 76.35 P
ATOM 3 OP1 C A 365 96.427 99.802 4.094 1.00 76.95 O
ATOM 4 OP2 C A 365 95.051 97.690 3.582 1.00 76.67 O
ATOM 5 O5' C A 365 94.018 99.973 3.462 1.00 73.76 O
ATOM 6 C5' C A 365 94.028 101.397 3.245 1.00 73.31 C
ATOM 7 C4' C A 365 92.710 101.996 3.660 1.00 72.22 C
ATOM 8 O4' C A 365 91.677 101.516 2.766 1.00 72.26 O
ATOM 9 C3' C A 365 92.229 101.599 5.045 1.00 71.84 C
ATOM 10 O3' C A 365 92.830 102.400 6.058 1.00 71.98 O
ATOM 11 C2' C A 365 90.722 101.782 4.926 1.00 71.80 C
ATOM 12 O2' C A 365 90.319 103.138 5.006 1.00 71.32 O
ATOM 13 C1' C A 365 90.482 101.290 3.497 1.00 71.71 C
ATOM 14 N1 C A 365 90.131 99.859 3.370 1.00 70.81 N
ATOM 15 C2 C A 365 88.778 99.495 3.302 1.00 70.22 C
ATOM 16 O2 C A 365 87.911 100.373 3.425 1.00 70.50 O
ATOM 17 N3 C A 365 88.451 98.199 3.109 1.00 69.01 N
ATOM 18 C4 C A 365 89.410 97.280 2.996 1.00 69.53 C
ATOM 19 N4 C A 365 89.043 96.017 2.769 1.00 69.32 N
ATOM 20 C5 C A 365 90.792 97.615 3.103 1.00 69.43 C
ATOM 21 C6 C A 365 91.105 98.902 3.291 1.00 69.69 C
ATOM 22 P A A 366 92.990 101.815 7.552 1.00 73.07 P
ATOM 23 OP1 A A 366 93.735 102.844 8.320 1.00 71.95 O
ATOM 24 OP2 A A 366 93.507 100.416 7.509 1.00 71.41 O
ATOM 25 O5' A A 366 91.492 101.786 8.093 1.00 71.79 O
TER
ATOM 1 O3' A B 229 89.927 111.827 7.163 1.00 59.08 O
ATOM 2 P A B 230 90.400 111.855 5.630 1.00 60.26 P
ATOM 3 OP1 A B 230 91.632 112.682 5.576 1.00 58.16 O
ATOM 4 OP2 A B 230 89.224 112.228 4.796 1.00 59.75 O
ATOM 5 O5' A B 230 90.768 110.334 5.324 1.00 59.00 O
ATOM 6 C5' A B 230 91.856 109.682 6.013 1.00 59.95 C
ATOM 7 C4' A B 230 91.819 108.187 5.767 1.00 61.17 C
ATOM 8 O4' A B 230 90.565 107.657 6.260 1.00 60.86 O
ATOM 9 C3' A B 230 91.849 107.725 4.318 1.00 62.63 C
ATOM 10 O3' A B 230 93.172 107.713 3.787 1.00 66.26 O
ATOM 11 C2' A B 230 91.256 106.328 4.423 1.00 60.62 C
ATOM 12 O2' A B 230 92.168 105.383 4.948 1.00 60.61 O
ATOM 13 C1' A B 230 90.163 106.556 5.461 1.00 58.76 C
ATOM 14 N9 A B 230 88.847 106.851 4.894 1.00 56.59 N
ATOM 15 C8 A B 230 88.282 108.074 4.611 1.00 56.28 C
ATOM 16 N7 A B 230 87.053 107.997 4.153 1.00 54.17 N
ATOM 17 C5 A B 230 86.797 106.634 4.117 1.00 54.27 C
ATOM 18 C6 A B 230 85.665 105.893 3.726 1.00 52.85 C
ATOM 19 N6 A B 230 84.545 106.442 3.259 1.00 52.03 N
ATOM 20 N1 A B 230 85.731 104.547 3.826 1.00 52.55 N
ATOM 21 C2 A B 230 86.868 103.990 4.279 1.00 54.85 C
ATOM 22 N3 A B 230 88.002 104.578 4.667 1.00 54.50 N
ATOM 23 C4 A B 230 87.898 105.915 4.563 1.00 55.55 C
ATOM 24 P A B 231 93.423 108.130 2.250 1.00 69.50 P
ATOM 25 OP1 A B 231 94.877 108.424 2.152 1.00 69.58 O
ATOM 26 OP2 A B 231 92.429 109.163 1.810 1.00 66.91 O
ATOM 27 O5' A B 231 93.113 106.793 1.441 1.00 68.58 O
TER
ATOM 2 P C A 365 95.357 99.126 3.314 1.00 76.35 P
ATOM 3 OP1 C A 365 96.427 99.802 4.094 1.00 76.95 O
ATOM 4 OP2 C A 365 95.051 97.690 3.582 1.00 76.67 O
ATOM 5 O5' C A 365 94.018 99.973 3.462 1.00 73.76 O
ATOM 6 C5' C A 365 94.028 101.397 3.245 1.00 73.31 C
ATOM 7 C4' C A 365 92.710 101.996 3.660 1.00 72.22 C
ATOM 8 O4' C A 365 91.677 101.516 2.766 1.00 72.26 O
ATOM 9 C3' C A 365 92.229 101.599 5.045 1.00 71.84 C
ATOM 10 O3' C A 365 92.830 102.400 6.058 1.00 71.98 O
ATOM 11 C2' C A 365 90.722 101.782 4.926 1.00 71.80 C
ATOM 12 O2' C A 365 90.319 103.138 5.006 1.00 71.32 O
ATOM 13 C1' C A 365 90.482 101.290 3.497 1.00 71.71 C
ATOM 14 N1 C A 365 90.131 99.859 3.370 1.00 70.81 N
ATOM 15 C2 C A 365 88.778 99.495 3.302 1.00 70.22 C
ATOM 16 O2 C A 365 87.911 100.373 3.425 1.00 70.50 O
ATOM 17 N3 C A 365 88.451 98.199 3.109 1.00 69.01 N
ATOM 18 C4 C A 365 89.410 97.280 2.996 1.00 69.53 C
ATOM 19 N4 C A 365 89.043 96.017 2.769 1.00 69.32 N
ATOM 20 C5 C A 365 90.792 97.615 3.103 1.00 69.43 C
ATOM 21 C6 C A 365 91.105 98.902 3.291 1.00 69.69 C
ATOM 22 P A A 366 92.990 101.815 7.552 1.00 73.07 P
ATOM 23 OP1 A A 366 93.735 102.844 8.320 1.00 71.95 O
ATOM 24 OP2 A A 366 93.507 100.416 7.509 1.00 71.41 O
ATOM 25 O5' A A 366 91.492 101.786 8.093 1.00 71.79 O
TER
ATOM 1 O3' A B 229 89.927 111.827 7.163 1.00 59.08 O
ATOM 2 P A B 230 90.400 111.855 5.630 1.00 60.26 P
ATOM 3 OP1 A B 230 91.632 112.682 5.576 1.00 58.16 O
ATOM 4 OP2 A B 230 89.224 112.228 4.796 1.00 59.75 O
ATOM 5 O5' A B 230 90.768 110.334 5.324 1.00 59.00 O
ATOM 6 C5' A B 230 91.856 109.682 6.013 1.00 59.95 C
ATOM 7 C4' A B 230 91.819 108.187 5.767 1.00 61.17 C
ATOM 8 O4' A B 230 90.565 107.657 6.260 1.00 60.86 O
ATOM 9 C3' A B 230 91.849 107.725 4.318 1.00 62.63 C
ATOM 10 O3' A B 230 93.172 107.713 3.787 1.00 66.26 O
ATOM 11 C2' A B 230 91.256 106.328 4.423 1.00 60.62 C
ATOM 12 O2' A B 230 92.168 105.383 4.948 1.00 60.61 O
ATOM 13 C1' A B 230 90.163 106.556 5.461 1.00 58.76 C
ATOM 14 N9 A B 230 88.847 106.851 4.894 1.00 56.59 N
ATOM 15 C8 A B 230 88.282 108.074 4.611 1.00 56.28 C
ATOM 16 N7 A B 230 87.053 107.997 4.153 1.00 54.17 N
ATOM 17 C5 A B 230 86.797 106.634 4.117 1.00 54.27 C
ATOM 18 C6 A B 230 85.665 105.893 3.726 1.00 52.85 C
ATOM 19 N6 A B 230 84.545 106.442 3.259 1.00 52.03 N
ATOM 20 N1 A B 230 85.731 104.547 3.826 1.00 52.55 N
ATOM 21 C2 A B 230 86.868 103.990 4.279 1.00 54.85 C
ATOM 22 N3 A B 230 88.002 104.578 4.667 1.00 54.50 N
ATOM 23 C4 A B 230 87.898 105.915 4.563 1.00 55.55 C
ATOM 24 P A B 231 93.423 108.130 2.250 1.00 69.50 P
ATOM 25 OP1 A B 231 94.877 108.424 2.152 1.00 69.58 O
ATOM 26 OP2 A B 231 92.429 109.163 1.810 1.00 66.91 O
ATOM 27 O5' A B 231 93.113 106.793 1.441 1.00 68.58 O
TER
Atoms:
C2: (88.778,99.495,3.302)
OP1: (96.427,99.802,4.094)
OP2: (95.051,97.690,3.582)
C4: (89.410,97.280,2.996)
O5': (94.018,99.973,3.462)
C3': (92.229,101.599,5.045)
C1': (90.482,101.290,3.497)
O4': (91.677,101.516,2.766)
C5': (94.028,101.397,3.245)
P: (95.357,99.126,3.314)
O2: (87.911,100.373,3.425)
C4': (92.710,101.996,3.660)
C2': (90.722,101.782,4.926)
O2': (90.319,103.138,5.006)
N1: (90.131,99.859,3.370)
N3: (88.451,98.199,3.109)
N4: (89.043,96.017,2.769)
C6: (91.105,98.902,3.291)
C5: (90.792,97.615,3.103)
O3': (92.830,102.400,6.058)
OP1: (96.427,99.802,4.094)
OP2: (95.051,97.690,3.582)
C4: (89.410,97.280,2.996)
O5': (94.018,99.973,3.462)
C3': (92.229,101.599,5.045)
C1': (90.482,101.290,3.497)
O4': (91.677,101.516,2.766)
C5': (94.028,101.397,3.245)
P: (95.357,99.126,3.314)
O2: (87.911,100.373,3.425)
C4': (92.710,101.996,3.660)
C2': (90.722,101.782,4.926)
O2': (90.319,103.138,5.006)
N1: (90.131,99.859,3.370)
N3: (88.451,98.199,3.109)
N4: (89.043,96.017,2.769)
C6: (91.105,98.902,3.291)
C5: (90.792,97.615,3.103)
O3': (92.830,102.400,6.058)
OP1: (91.632,112.682,5.576)
OP2: (89.224,112.228,4.796)
C3': (91.849,107.725,4.318)
C1': (90.163,106.556,5.461)
C5': (91.856,109.682,6.013)
O4': (90.565,107.657,6.260)
C8: (88.282,108.074,4.611)
O2': (92.168,105.383,4.948)
C6: (85.665,105.893,3.726)
C5: (86.797,106.634,4.117)
C4: (87.898,105.915,4.563)
P: (90.400,111.855,5.630)
C4': (91.819,108.187,5.767)
C2': (91.256,106.328,4.423)
C2: (86.868,103.990,4.279)
N1: (85.731,104.547,3.826)
N3: (88.002,104.578,4.667)
N6: (84.545,106.442,3.259)
N7: (87.053,107.997,4.153)
N9: (88.847,106.851,4.894)
O5': (90.768,110.334,5.324)
O3': (93.172,107.713,3.787)
OP2: (89.224,112.228,4.796)
C3': (91.849,107.725,4.318)
C1': (90.163,106.556,5.461)
C5': (91.856,109.682,6.013)
O4': (90.565,107.657,6.260)
C8: (88.282,108.074,4.611)
O2': (92.168,105.383,4.948)
C6: (85.665,105.893,3.726)
C5: (86.797,106.634,4.117)
C4: (87.898,105.915,4.563)
P: (90.400,111.855,5.630)
C4': (91.819,108.187,5.767)
C2': (91.256,106.328,4.423)
C2: (86.868,103.990,4.279)
N1: (85.731,104.547,3.826)
N3: (88.002,104.578,4.667)
N6: (84.545,106.442,3.259)
N7: (87.053,107.997,4.153)
N9: (88.847,106.851,4.894)
O5': (90.768,110.334,5.324)
O3': (93.172,107.713,3.787)
Image (generated by PyMOL):