Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E24:E9
Extra
PDB:
ATOM 1 O3' A A 23 -2.475 22.410 105.227 1.00 65.15 O
ATOM 2 P C A 24 -1.024 22.715 104.602 1.00 74.64 P
ATOM 3 OP1 C A 24 -1.176 23.799 103.597 1.00 71.11 O
ATOM 4 OP2 C A 24 -0.402 21.425 104.202 1.00 59.95 O
ATOM 5 O5' C A 24 -0.195 23.292 105.830 1.00 65.87 O
ATOM 6 C5' C A 24 -0.649 24.437 106.534 1.00 61.81 C
ATOM 7 C4' C A 24 0.255 24.714 107.704 1.00 67.88 C
ATOM 8 O4' C A 24 0.085 23.695 108.721 1.00 72.92 O
ATOM 9 C3' C A 24 1.734 24.669 107.379 1.00 68.51 C
ATOM 10 O3' C A 24 2.137 25.897 106.797 1.00 64.45 O
ATOM 11 C2' C A 24 2.351 24.415 108.750 1.00 69.77 C
ATOM 12 O2' C A 24 2.442 25.582 109.540 1.00 72.80 O
ATOM 13 C1' C A 24 1.327 23.458 109.367 1.00 71.66 C
ATOM 14 N1 C A 24 1.670 22.036 109.192 1.00 70.81 N
ATOM 15 C2 C A 24 2.486 21.418 110.143 1.00 69.71 C
ATOM 16 O2 C A 24 2.894 22.085 111.104 1.00 71.98 O
ATOM 17 N3 C A 24 2.809 20.112 109.991 1.00 66.55 N
ATOM 18 C4 C A 24 2.346 19.430 108.943 1.00 66.08 C
ATOM 19 N4 C A 24 2.687 18.144 108.833 1.00 62.53 N
ATOM 20 C5 C A 24 1.512 20.035 107.959 1.00 66.79 C
ATOM 21 C6 C A 24 1.202 21.328 108.121 1.00 67.90 C
ATOM 22 P A A 25 3.591 26.022 106.142 1.00 67.61 P
ATOM 23 OP1 A A 25 3.684 27.287 105.368 1.00 74.24 O
ATOM 24 OP2 A A 25 3.881 24.734 105.471 1.00 59.36 O
ATOM 25 O5' A A 25 4.522 26.174 107.419 1.00 65.67 O
TER
ATOM 1 O3' A B 8 3.608 33.186 113.873 1.00 77.10 O
ATOM 2 P A B 9 2.040 32.998 113.576 1.00 81.04 P
ATOM 3 OP1 A B 9 1.546 34.234 112.919 1.00 86.19 O
ATOM 4 OP2 A B 9 1.396 32.524 114.828 1.00 75.55 O
ATOM 5 O5' A B 9 1.974 31.810 112.517 1.00 74.92 O
ATOM 6 C5' A B 9 2.420 31.993 111.176 1.00 82.23 C
ATOM 7 C4' A B 9 2.458 30.665 110.455 1.00 81.96 C
ATOM 8 O4' A B 9 3.434 29.800 111.098 1.00 80.44 O
ATOM 9 C3' A B 9 1.160 29.872 110.502 1.00 85.67 C
ATOM 10 O3' A B 9 0.276 30.280 109.463 1.00 82.50 O
ATOM 11 C2' A B 9 1.653 28.443 110.312 1.00 83.21 C
ATOM 12 O2' A B 9 1.947 28.134 108.965 1.00 94.40 O
ATOM 13 C1' A B 9 2.950 28.466 111.122 1.00 78.39 C
ATOM 14 N9 A B 9 2.749 28.077 112.517 1.00 72.56 N
ATOM 15 C8 A B 9 2.654 28.891 113.618 1.00 70.55 C
ATOM 16 N7 A B 9 2.463 28.240 114.740 1.00 70.79 N
ATOM 17 C5 A B 9 2.432 26.909 114.353 1.00 67.71 C
ATOM 18 C6 A B 9 2.264 25.718 115.077 1.00 67.60 C
ATOM 19 N6 A B 9 2.084 25.673 116.399 1.00 64.37 N
ATOM 20 N1 A B 9 2.287 24.556 114.389 1.00 68.43 N
ATOM 21 C2 A B 9 2.468 24.600 113.065 1.00 71.08 C
ATOM 22 N3 A B 9 2.636 25.656 112.272 1.00 71.74 N
ATOM 23 C4 A B 9 2.608 26.793 112.987 1.00 71.62 C
ATOM 24 P G B 10 -1.295 30.438 109.771 1.00 85.37 P
ATOM 25 OP1 G B 10 -1.946 30.986 108.554 1.00 90.15 O
ATOM 26 OP2 G B 10 -1.445 31.148 111.069 1.00 81.90 O
ATOM 27 O5' G B 10 -1.805 28.945 109.976 1.00 79.00 O
TER
ATOM 2 P C A 24 -1.024 22.715 104.602 1.00 74.64 P
ATOM 3 OP1 C A 24 -1.176 23.799 103.597 1.00 71.11 O
ATOM 4 OP2 C A 24 -0.402 21.425 104.202 1.00 59.95 O
ATOM 5 O5' C A 24 -0.195 23.292 105.830 1.00 65.87 O
ATOM 6 C5' C A 24 -0.649 24.437 106.534 1.00 61.81 C
ATOM 7 C4' C A 24 0.255 24.714 107.704 1.00 67.88 C
ATOM 8 O4' C A 24 0.085 23.695 108.721 1.00 72.92 O
ATOM 9 C3' C A 24 1.734 24.669 107.379 1.00 68.51 C
ATOM 10 O3' C A 24 2.137 25.897 106.797 1.00 64.45 O
ATOM 11 C2' C A 24 2.351 24.415 108.750 1.00 69.77 C
ATOM 12 O2' C A 24 2.442 25.582 109.540 1.00 72.80 O
ATOM 13 C1' C A 24 1.327 23.458 109.367 1.00 71.66 C
ATOM 14 N1 C A 24 1.670 22.036 109.192 1.00 70.81 N
ATOM 15 C2 C A 24 2.486 21.418 110.143 1.00 69.71 C
ATOM 16 O2 C A 24 2.894 22.085 111.104 1.00 71.98 O
ATOM 17 N3 C A 24 2.809 20.112 109.991 1.00 66.55 N
ATOM 18 C4 C A 24 2.346 19.430 108.943 1.00 66.08 C
ATOM 19 N4 C A 24 2.687 18.144 108.833 1.00 62.53 N
ATOM 20 C5 C A 24 1.512 20.035 107.959 1.00 66.79 C
ATOM 21 C6 C A 24 1.202 21.328 108.121 1.00 67.90 C
ATOM 22 P A A 25 3.591 26.022 106.142 1.00 67.61 P
ATOM 23 OP1 A A 25 3.684 27.287 105.368 1.00 74.24 O
ATOM 24 OP2 A A 25 3.881 24.734 105.471 1.00 59.36 O
ATOM 25 O5' A A 25 4.522 26.174 107.419 1.00 65.67 O
TER
ATOM 1 O3' A B 8 3.608 33.186 113.873 1.00 77.10 O
ATOM 2 P A B 9 2.040 32.998 113.576 1.00 81.04 P
ATOM 3 OP1 A B 9 1.546 34.234 112.919 1.00 86.19 O
ATOM 4 OP2 A B 9 1.396 32.524 114.828 1.00 75.55 O
ATOM 5 O5' A B 9 1.974 31.810 112.517 1.00 74.92 O
ATOM 6 C5' A B 9 2.420 31.993 111.176 1.00 82.23 C
ATOM 7 C4' A B 9 2.458 30.665 110.455 1.00 81.96 C
ATOM 8 O4' A B 9 3.434 29.800 111.098 1.00 80.44 O
ATOM 9 C3' A B 9 1.160 29.872 110.502 1.00 85.67 C
ATOM 10 O3' A B 9 0.276 30.280 109.463 1.00 82.50 O
ATOM 11 C2' A B 9 1.653 28.443 110.312 1.00 83.21 C
ATOM 12 O2' A B 9 1.947 28.134 108.965 1.00 94.40 O
ATOM 13 C1' A B 9 2.950 28.466 111.122 1.00 78.39 C
ATOM 14 N9 A B 9 2.749 28.077 112.517 1.00 72.56 N
ATOM 15 C8 A B 9 2.654 28.891 113.618 1.00 70.55 C
ATOM 16 N7 A B 9 2.463 28.240 114.740 1.00 70.79 N
ATOM 17 C5 A B 9 2.432 26.909 114.353 1.00 67.71 C
ATOM 18 C6 A B 9 2.264 25.718 115.077 1.00 67.60 C
ATOM 19 N6 A B 9 2.084 25.673 116.399 1.00 64.37 N
ATOM 20 N1 A B 9 2.287 24.556 114.389 1.00 68.43 N
ATOM 21 C2 A B 9 2.468 24.600 113.065 1.00 71.08 C
ATOM 22 N3 A B 9 2.636 25.656 112.272 1.00 71.74 N
ATOM 23 C4 A B 9 2.608 26.793 112.987 1.00 71.62 C
ATOM 24 P G B 10 -1.295 30.438 109.771 1.00 85.37 P
ATOM 25 OP1 G B 10 -1.946 30.986 108.554 1.00 90.15 O
ATOM 26 OP2 G B 10 -1.445 31.148 111.069 1.00 81.90 O
ATOM 27 O5' G B 10 -1.805 28.945 109.976 1.00 79.00 O
TER
Atoms:
C2: (2.486,21.418,110.143)
OP1: (-1.176,23.799,103.597)
OP2: (-0.402,21.425,104.202)
C4: (2.346,19.430,108.943)
O5': (-0.195,23.292,105.830)
C3': (1.734,24.669,107.379)
C1': (1.327,23.458,109.367)
O4': (0.085,23.695,108.721)
C5': (-0.649,24.437,106.534)
P: (-1.024,22.715,104.602)
O2: (2.894,22.085,111.104)
C4': (0.255,24.714,107.704)
C2': (2.351,24.415,108.750)
O2': (2.442,25.582,109.540)
N1: (1.670,22.036,109.192)
N3: (2.809,20.112,109.991)
N4: (2.687,18.144,108.833)
C6: (1.202,21.328,108.121)
C5: (1.512,20.035,107.959)
O3': (2.137,25.897,106.797)
OP1: (-1.176,23.799,103.597)
OP2: (-0.402,21.425,104.202)
C4: (2.346,19.430,108.943)
O5': (-0.195,23.292,105.830)
C3': (1.734,24.669,107.379)
C1': (1.327,23.458,109.367)
O4': (0.085,23.695,108.721)
C5': (-0.649,24.437,106.534)
P: (-1.024,22.715,104.602)
O2: (2.894,22.085,111.104)
C4': (0.255,24.714,107.704)
C2': (2.351,24.415,108.750)
O2': (2.442,25.582,109.540)
N1: (1.670,22.036,109.192)
N3: (2.809,20.112,109.991)
N4: (2.687,18.144,108.833)
C6: (1.202,21.328,108.121)
C5: (1.512,20.035,107.959)
O3': (2.137,25.897,106.797)
OP1: (1.546,34.234,112.919)
OP2: (1.396,32.524,114.828)
C3': (1.160,29.872,110.502)
C1': (2.950,28.466,111.122)
C5': (2.420,31.993,111.176)
O4': (3.434,29.800,111.098)
C8: (2.654,28.891,113.618)
O2': (1.947,28.134,108.965)
C6: (2.264,25.718,115.077)
C5: (2.432,26.909,114.353)
C4: (2.608,26.793,112.987)
P: (2.040,32.998,113.576)
C4': (2.458,30.665,110.455)
C2': (1.653,28.443,110.312)
C2: (2.468,24.600,113.065)
N1: (2.287,24.556,114.389)
N3: (2.636,25.656,112.272)
N6: (2.084,25.673,116.399)
N7: (2.463,28.240,114.740)
N9: (2.749,28.077,112.517)
O5': (1.974,31.810,112.517)
O3': (0.276,30.280,109.463)
OP2: (1.396,32.524,114.828)
C3': (1.160,29.872,110.502)
C1': (2.950,28.466,111.122)
C5': (2.420,31.993,111.176)
O4': (3.434,29.800,111.098)
C8: (2.654,28.891,113.618)
O2': (1.947,28.134,108.965)
C6: (2.264,25.718,115.077)
C5: (2.432,26.909,114.353)
C4: (2.608,26.793,112.987)
P: (2.040,32.998,113.576)
C4': (2.458,30.665,110.455)
C2': (1.653,28.443,110.312)
C2: (2.468,24.600,113.065)
N1: (2.287,24.556,114.389)
N3: (2.636,25.656,112.272)
N6: (2.084,25.673,116.399)
N7: (2.463,28.240,114.740)
N9: (2.749,28.077,112.517)
O5': (1.974,31.810,112.517)
O3': (0.276,30.280,109.463)
Image (generated by PyMOL):