ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01812:01816

Extra

PDB:
ATOM 1 O3' C A1811 116.940 118.229 65.493 1.00 41.59 O
ATOM 2 P C A1812 118.436 118.115 64.930 1.00 43.13 P
ATOM 3 OP1 C A1812 118.486 116.904 64.068 1.00 42.96 O
ATOM 4 OP2 C A1812 119.356 118.237 66.080 1.00 42.33 O
ATOM 5 O5' C A1812 118.593 119.386 63.980 1.00 42.29 O
ATOM 6 C5' C A1812 117.859 119.452 62.748 1.00 41.98 C
ATOM 7 C4' C A1812 117.734 120.876 62.269 1.00 42.21 C
ATOM 8 O4' C A1812 117.164 121.707 63.312 1.00 41.03 O
ATOM 9 C3' C A1812 119.023 121.591 61.912 1.00 43.53 C
ATOM 10 O3' C A1812 119.470 121.209 60.616 1.00 47.05 O
ATOM 11 C2' C A1812 118.577 123.046 61.961 1.00 42.13 C
ATOM 12 O2' C A1812 117.822 123.426 60.827 1.00 39.05 O
ATOM 13 C1' C A1812 117.661 123.031 63.186 1.00 39.38 C
ATOM 14 N1 C A1812 118.374 123.394 64.424 1.00 36.87 N
ATOM 15 C2 C A1812 118.510 124.750 64.754 1.00 36.83 C
ATOM 16 O2 C A1812 118.029 125.601 64.002 1.00 38.16 O
ATOM 17 N3 C A1812 119.167 125.096 65.883 1.00 35.97 N
ATOM 18 C4 C A1812 119.678 124.149 66.670 1.00 36.16 C
ATOM 19 N4 C A1812 120.308 124.529 67.775 1.00 36.20 N
ATOM 20 C5 C A1812 119.561 122.764 66.359 1.00 37.08 C
ATOM 21 C6 C A1812 118.904 122.434 65.237 1.00 37.47 C
ATOM 22 P G A1813 121.028 121.317 60.237 1.00 48.60 P
ATOM 23 OP1 G A1813 121.170 120.624 58.934 1.00 48.47 O
ATOM 24 OP2 G A1813 121.841 120.877 61.399 1.00 46.75 O
ATOM 25 O5' G A1813 121.265 122.874 59.988 1.00 48.23 O
TER

ATOM 1 O3' A B1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 2 P A B1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 3 OP1 A B1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 4 OP2 A B1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 5 O5' A B1816 115.365 123.869 54.401 1.00 52.73 O
ATOM 6 C5' A B1816 116.082 122.642 54.631 1.00 47.72 C
ATOM 7 C4' A B1816 116.553 122.564 56.066 1.00 44.47 C
ATOM 8 O4' A B1816 117.210 123.808 56.420 1.00 44.67 O
ATOM 9 C3' A B1816 115.482 122.436 57.127 1.00 45.33 C
ATOM 10 O3' A B1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 11 C2' A B1816 116.211 122.925 58.374 1.00 45.18 C
ATOM 12 O2' A B1816 117.110 121.977 58.912 1.00 44.97 O
ATOM 13 C1' A B1816 117.030 124.076 57.802 1.00 44.39 C
ATOM 14 N9 A B1816 116.379 125.379 57.945 1.00 45.19 N
ATOM 15 C8 A B1816 115.823 126.157 56.958 1.00 46.37 C
ATOM 16 N7 A B1816 115.311 127.282 57.396 1.00 46.82 N
ATOM 17 C5 A B1816 115.541 127.244 58.764 1.00 45.73 C
ATOM 18 C6 A B1816 115.224 128.141 59.803 1.00 47.05 C
ATOM 19 N6 A B1816 114.598 129.308 59.611 1.00 47.10 N
ATOM 20 N1 A B1816 115.579 127.795 61.063 1.00 47.60 N
ATOM 21 C2 A B1816 116.218 126.630 61.250 1.00 47.05 C
ATOM 22 N3 A B1816 116.575 125.708 60.354 1.00 46.12 N
ATOM 23 C4 A B1816 116.200 126.078 59.117 1.00 45.33 C
ATOM 24 P A B1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 25 OP1 A B1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 26 OP2 A B1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 27 O5' A B1817 113.442 121.163 59.227 1.00 41.06 O
TER

Atoms:
C2: (118.510,124.750,64.754)
OP1: (118.486,116.904,64.068)
OP2: (119.356,118.237,66.080)
C4: (119.678,124.149,66.670)
O5': (118.593,119.386,63.980)
C3': (119.023,121.591,61.912)
C1': (117.661,123.031,63.186)
O4': (117.164,121.707,63.312)
C5': (117.859,119.452,62.748)
P: (118.436,118.115,64.930)
O2: (118.029,125.601,64.002)
C4': (117.734,120.876,62.269)
C2': (118.577,123.046,61.961)
O2': (117.822,123.426,60.827)
N1: (118.374,123.394,64.424)
N3: (119.167,125.096,65.883)
N4: (120.308,124.529,67.775)
C6: (118.904,122.434,65.237)
C5: (119.561,122.764,66.359)
O3': (119.470,121.209,60.616)
OP1: (113.329,123.008,53.238)
OP2: (114.014,125.476,53.037)
C3': (115.482,122.436,57.127)
C1': (117.030,124.076,57.802)
C5': (116.082,122.642,54.631)
O4': (117.210,123.808,56.420)
C8: (115.823,126.157,56.958)
O2': (117.110,121.977,58.912)
C6: (115.224,128.141,59.803)
C5: (115.541,127.244,58.764)
C4: (116.200,126.078,59.117)
P: (114.394,124.041,53.146)
C4': (116.553,122.564,56.066)
C2': (116.211,122.925,58.374)
C2: (116.218,126.630,61.250)
N1: (115.579,127.795,61.063)
N3: (116.575,125.708,60.354)
N6: (114.598,129.308,59.611)
N7: (115.311,127.282,57.396)
N9: (116.379,125.379,57.945)
O5': (115.365,123.869,54.401)
O3': (115.030,121.094,57.253)
Image (generated by PyMOL):
PyMOL image
show in jmol