Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1328:A1264
Extra
PDB:
ATOM 1 O3' U A1327 241.199 133.116 -7.088 1.00 81.29 O
ATOM 2 P C A1328 241.441 132.748 -5.542 1.00 81.94 P
ATOM 3 OP1 C A1328 242.747 132.033 -5.445 1.00 81.46 O
ATOM 4 OP2 C A1328 240.227 132.103 -5.000 1.00 82.19 O
ATOM 5 O5' C A1328 241.600 134.166 -4.859 1.00 83.95 O
ATOM 6 C5' C A1328 242.757 134.983 -5.120 1.00 85.14 C
ATOM 7 C4' C A1328 242.797 136.159 -4.174 1.00 85.80 C
ATOM 8 O4' C A1328 241.824 137.165 -4.561 1.00 87.09 O
ATOM 9 C3' C A1328 242.489 135.840 -2.723 1.00 85.48 C
ATOM 10 O3' C A1328 243.637 135.364 -2.054 1.00 85.74 O
ATOM 11 C2' C A1328 242.025 137.187 -2.186 1.00 86.79 C
ATOM 12 O2' C A1328 243.104 138.019 -1.840 1.00 87.60 O
ATOM 13 C1' C A1328 241.311 137.792 -3.399 1.00 87.87 C
ATOM 14 N1 C A1328 239.845 137.602 -3.357 1.00 89.84 N
ATOM 15 C2 C A1328 239.015 138.727 -3.220 1.00 89.98 C
ATOM 16 O2 C A1328 239.527 139.858 -3.179 1.00 90.02 O
ATOM 17 N3 C A1328 237.674 138.551 -3.139 1.00 89.78 N
ATOM 18 C4 C A1328 237.154 137.324 -3.201 1.00 89.59 C
ATOM 19 N4 C A1328 235.827 137.200 -3.115 1.00 89.29 N
ATOM 20 C5 C A1328 237.970 136.168 -3.355 1.00 90.59 C
ATOM 21 C6 C A1328 239.296 136.350 -3.431 1.00 90.29 C
ATOM 22 P G A1329 243.501 134.178 -0.978 1.00 88.14 P
ATOM 23 OP1 G A1329 244.823 133.502 -0.861 1.00 86.99 O
ATOM 24 OP2 G A1329 242.315 133.383 -1.340 1.00 90.32 O
ATOM 25 O5' G A1329 243.206 134.926 0.402 1.00 89.74 O
TER
ATOM 1 O3' A B1263 248.073 141.867 4.071 1.00103.94 O
ATOM 2 P A B1264 248.958 141.452 2.794 1.00103.08 P
ATOM 3 OP1 A B1264 250.056 140.567 3.310 1.00101.16 O
ATOM 4 OP2 A B1264 249.268 142.686 2.014 1.00101.99 O
ATOM 5 O5' A B1264 247.976 140.568 1.928 1.00103.37 O
ATOM 6 C5' A B1264 248.003 139.129 1.976 1.00102.46 C
ATOM 7 C4' A B1264 247.145 138.579 0.865 1.00102.02 C
ATOM 8 O4' A B1264 245.810 139.131 1.031 1.00101.59 O
ATOM 9 C3' A B1264 247.555 139.007 -0.542 1.00102.29 C
ATOM 10 O3' A B1264 248.544 138.157 -1.131 1.00101.48 O
ATOM 11 C2' A B1264 246.239 138.965 -1.308 1.00102.15 C
ATOM 12 O2' A B1264 245.914 137.670 -1.772 1.00102.63 O
ATOM 13 C1' A B1264 245.240 139.406 -0.236 1.00101.39 C
ATOM 14 N9 A B1264 244.950 140.837 -0.321 1.00 99.82 N
ATOM 15 C8 A B1264 245.627 141.873 0.261 1.00 99.55 C
ATOM 16 N7 A B1264 245.145 143.052 -0.040 1.00 99.98 N
ATOM 17 C5 A B1264 244.069 142.773 -0.868 1.00 99.47 C
ATOM 18 C6 A B1264 243.139 143.601 -1.532 1.00 99.89 C
ATOM 19 N6 A B1264 243.140 144.932 -1.454 1.00100.45 N
ATOM 20 N1 A B1264 242.194 143.005 -2.287 1.00 99.86 N
ATOM 21 C2 A B1264 242.187 141.671 -2.361 1.00100.90 C
ATOM 22 N3 A B1264 243.001 140.788 -1.782 1.00100.84 N
ATOM 23 C4 A B1264 243.932 141.412 -1.042 1.00 99.89 C
ATOM 24 P A B1265 249.461 138.715 -2.334 1.00100.85 P
ATOM 25 OP1 A B1265 250.400 137.603 -2.668 1.00100.71 O
ATOM 26 OP2 A B1265 249.989 140.058 -1.969 1.00101.20 O
ATOM 27 O5' A B1265 248.453 138.891 -3.559 1.00100.43 O
TER
ATOM 2 P C A1328 241.441 132.748 -5.542 1.00 81.94 P
ATOM 3 OP1 C A1328 242.747 132.033 -5.445 1.00 81.46 O
ATOM 4 OP2 C A1328 240.227 132.103 -5.000 1.00 82.19 O
ATOM 5 O5' C A1328 241.600 134.166 -4.859 1.00 83.95 O
ATOM 6 C5' C A1328 242.757 134.983 -5.120 1.00 85.14 C
ATOM 7 C4' C A1328 242.797 136.159 -4.174 1.00 85.80 C
ATOM 8 O4' C A1328 241.824 137.165 -4.561 1.00 87.09 O
ATOM 9 C3' C A1328 242.489 135.840 -2.723 1.00 85.48 C
ATOM 10 O3' C A1328 243.637 135.364 -2.054 1.00 85.74 O
ATOM 11 C2' C A1328 242.025 137.187 -2.186 1.00 86.79 C
ATOM 12 O2' C A1328 243.104 138.019 -1.840 1.00 87.60 O
ATOM 13 C1' C A1328 241.311 137.792 -3.399 1.00 87.87 C
ATOM 14 N1 C A1328 239.845 137.602 -3.357 1.00 89.84 N
ATOM 15 C2 C A1328 239.015 138.727 -3.220 1.00 89.98 C
ATOM 16 O2 C A1328 239.527 139.858 -3.179 1.00 90.02 O
ATOM 17 N3 C A1328 237.674 138.551 -3.139 1.00 89.78 N
ATOM 18 C4 C A1328 237.154 137.324 -3.201 1.00 89.59 C
ATOM 19 N4 C A1328 235.827 137.200 -3.115 1.00 89.29 N
ATOM 20 C5 C A1328 237.970 136.168 -3.355 1.00 90.59 C
ATOM 21 C6 C A1328 239.296 136.350 -3.431 1.00 90.29 C
ATOM 22 P G A1329 243.501 134.178 -0.978 1.00 88.14 P
ATOM 23 OP1 G A1329 244.823 133.502 -0.861 1.00 86.99 O
ATOM 24 OP2 G A1329 242.315 133.383 -1.340 1.00 90.32 O
ATOM 25 O5' G A1329 243.206 134.926 0.402 1.00 89.74 O
TER
ATOM 1 O3' A B1263 248.073 141.867 4.071 1.00103.94 O
ATOM 2 P A B1264 248.958 141.452 2.794 1.00103.08 P
ATOM 3 OP1 A B1264 250.056 140.567 3.310 1.00101.16 O
ATOM 4 OP2 A B1264 249.268 142.686 2.014 1.00101.99 O
ATOM 5 O5' A B1264 247.976 140.568 1.928 1.00103.37 O
ATOM 6 C5' A B1264 248.003 139.129 1.976 1.00102.46 C
ATOM 7 C4' A B1264 247.145 138.579 0.865 1.00102.02 C
ATOM 8 O4' A B1264 245.810 139.131 1.031 1.00101.59 O
ATOM 9 C3' A B1264 247.555 139.007 -0.542 1.00102.29 C
ATOM 10 O3' A B1264 248.544 138.157 -1.131 1.00101.48 O
ATOM 11 C2' A B1264 246.239 138.965 -1.308 1.00102.15 C
ATOM 12 O2' A B1264 245.914 137.670 -1.772 1.00102.63 O
ATOM 13 C1' A B1264 245.240 139.406 -0.236 1.00101.39 C
ATOM 14 N9 A B1264 244.950 140.837 -0.321 1.00 99.82 N
ATOM 15 C8 A B1264 245.627 141.873 0.261 1.00 99.55 C
ATOM 16 N7 A B1264 245.145 143.052 -0.040 1.00 99.98 N
ATOM 17 C5 A B1264 244.069 142.773 -0.868 1.00 99.47 C
ATOM 18 C6 A B1264 243.139 143.601 -1.532 1.00 99.89 C
ATOM 19 N6 A B1264 243.140 144.932 -1.454 1.00100.45 N
ATOM 20 N1 A B1264 242.194 143.005 -2.287 1.00 99.86 N
ATOM 21 C2 A B1264 242.187 141.671 -2.361 1.00100.90 C
ATOM 22 N3 A B1264 243.001 140.788 -1.782 1.00100.84 N
ATOM 23 C4 A B1264 243.932 141.412 -1.042 1.00 99.89 C
ATOM 24 P A B1265 249.461 138.715 -2.334 1.00100.85 P
ATOM 25 OP1 A B1265 250.400 137.603 -2.668 1.00100.71 O
ATOM 26 OP2 A B1265 249.989 140.058 -1.969 1.00101.20 O
ATOM 27 O5' A B1265 248.453 138.891 -3.559 1.00100.43 O
TER
Atoms:
C2: (239.015,138.727,-3.220)
OP1: (242.747,132.033,-5.445)
OP2: (240.227,132.103,-5.000)
C4: (237.154,137.324,-3.201)
O5': (241.600,134.166,-4.859)
C3': (242.489,135.840,-2.723)
C1': (241.311,137.792,-3.399)
O4': (241.824,137.165,-4.561)
C5': (242.757,134.983,-5.120)
P: (241.441,132.748,-5.542)
O2: (239.527,139.858,-3.179)
C4': (242.797,136.159,-4.174)
C2': (242.025,137.187,-2.186)
O2': (243.104,138.019,-1.840)
N1: (239.845,137.602,-3.357)
N3: (237.674,138.551,-3.139)
N4: (235.827,137.200,-3.115)
C6: (239.296,136.350,-3.431)
C5: (237.970,136.168,-3.355)
O3': (243.637,135.364,-2.054)
OP1: (242.747,132.033,-5.445)
OP2: (240.227,132.103,-5.000)
C4: (237.154,137.324,-3.201)
O5': (241.600,134.166,-4.859)
C3': (242.489,135.840,-2.723)
C1': (241.311,137.792,-3.399)
O4': (241.824,137.165,-4.561)
C5': (242.757,134.983,-5.120)
P: (241.441,132.748,-5.542)
O2: (239.527,139.858,-3.179)
C4': (242.797,136.159,-4.174)
C2': (242.025,137.187,-2.186)
O2': (243.104,138.019,-1.840)
N1: (239.845,137.602,-3.357)
N3: (237.674,138.551,-3.139)
N4: (235.827,137.200,-3.115)
C6: (239.296,136.350,-3.431)
C5: (237.970,136.168,-3.355)
O3': (243.637,135.364,-2.054)
OP1: (250.056,140.567,3.310)
OP2: (249.268,142.686,2.014)
C3': (247.555,139.007,-0.542)
C1': (245.240,139.406,-0.236)
C5': (248.003,139.129,1.976)
O4': (245.810,139.131,1.031)
C8: (245.627,141.873,0.261)
O2': (245.914,137.670,-1.772)
C6: (243.139,143.601,-1.532)
C5: (244.069,142.773,-0.868)
C4: (243.932,141.412,-1.042)
P: (248.958,141.452,2.794)
C4': (247.145,138.579,0.865)
C2': (246.239,138.965,-1.308)
C2: (242.187,141.671,-2.361)
N1: (242.194,143.005,-2.287)
N3: (243.001,140.788,-1.782)
N6: (243.140,144.932,-1.454)
N7: (245.145,143.052,-0.040)
N9: (244.950,140.837,-0.321)
O5': (247.976,140.568,1.928)
O3': (248.544,138.157,-1.131)
OP2: (249.268,142.686,2.014)
C3': (247.555,139.007,-0.542)
C1': (245.240,139.406,-0.236)
C5': (248.003,139.129,1.976)
O4': (245.810,139.131,1.031)
C8: (245.627,141.873,0.261)
O2': (245.914,137.670,-1.772)
C6: (243.139,143.601,-1.532)
C5: (244.069,142.773,-0.868)
C4: (243.932,141.412,-1.042)
P: (248.958,141.452,2.794)
C4': (247.145,138.579,0.865)
C2': (246.239,138.965,-1.308)
C2: (242.187,141.671,-2.361)
N1: (242.194,143.005,-2.287)
N3: (243.001,140.788,-1.782)
N6: (243.140,144.932,-1.454)
N7: (245.145,143.052,-0.040)
N9: (244.950,140.837,-0.321)
O5': (247.976,140.568,1.928)
O3': (248.544,138.157,-1.131)
Image (generated by PyMOL):