Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01602:01573
Extra
PDB:
ATOM 1 O3' C A1601 104.882 177.700 65.186 1.00 51.47 O
ATOM 2 P C A1602 106.211 176.796 65.119 1.00 52.40 P
ATOM 3 OP1 C A1602 106.344 176.274 63.734 1.00 51.58 O
ATOM 4 OP2 C A1602 106.208 175.849 66.264 1.00 51.34 O
ATOM 5 O5' C A1602 107.389 177.841 65.353 1.00 53.46 O
ATOM 6 C5' C A1602 107.589 178.942 64.447 1.00 53.26 C
ATOM 7 C4' C A1602 108.824 179.717 64.831 1.00 53.32 C
ATOM 8 O4' C A1602 108.636 180.348 66.125 1.00 53.54 O
ATOM 9 C3' C A1602 110.077 178.885 65.019 1.00 53.29 C
ATOM 10 O3' C A1602 110.679 178.578 63.778 1.00 52.66 O
ATOM 11 C2' C A1602 110.936 179.795 65.881 1.00 53.29 C
ATOM 12 O2' C A1602 111.531 180.832 65.128 1.00 53.06 O
ATOM 13 C1' C A1602 109.881 180.399 66.812 1.00 53.85 C
ATOM 14 N1 C A1602 109.742 179.697 68.104 1.00 55.03 N
ATOM 15 C2 C A1602 110.754 179.837 69.064 1.00 55.86 C
ATOM 16 O2 C A1602 111.742 180.536 68.801 1.00 57.42 O
ATOM 17 N3 C A1602 110.626 179.210 70.255 1.00 56.18 N
ATOM 18 C4 C A1602 109.543 178.474 70.507 1.00 55.63 C
ATOM 19 N4 C A1602 109.450 177.886 71.702 1.00 54.94 N
ATOM 20 C5 C A1602 108.505 178.309 69.549 1.00 55.54 C
ATOM 21 C6 C A1602 108.644 178.929 68.373 1.00 54.68 C
ATOM 22 P U A1603 111.502 177.214 63.623 1.00 53.88 P
ATOM 23 OP1 U A1603 111.992 177.128 62.220 1.00 52.99 O
ATOM 24 OP2 U A1603 110.682 176.109 64.187 1.00 55.00 O
ATOM 25 O5' U A1603 112.760 177.446 64.566 1.00 53.27 O
TER
ATOM 1 O3' G B1572 116.322 182.126 57.582 1.00 64.05 O
ATOM 2 P A B1573 114.984 183.022 57.554 1.00 65.04 P
ATOM 3 OP1 A B1573 113.990 182.255 56.761 1.00 65.33 O
ATOM 4 OP2 A B1573 115.338 184.403 57.137 1.00 66.76 O
ATOM 5 O5' A B1573 114.488 183.044 59.071 1.00 63.20 O
ATOM 6 C5' A B1573 114.064 181.815 59.677 1.00 64.61 C
ATOM 7 C4' A B1573 113.211 182.041 60.910 1.00 63.79 C
ATOM 8 O4' A B1573 114.005 182.414 62.054 1.00 63.58 O
ATOM 9 C3' A B1573 112.100 183.077 60.963 1.00 61.87 C
ATOM 10 O3' A B1573 110.968 182.686 60.181 1.00 59.75 O
ATOM 11 C2' A B1573 111.741 183.004 62.450 1.00 62.53 C
ATOM 12 O2' A B1573 110.930 181.877 62.734 1.00 62.97 O
ATOM 13 C1' A B1573 113.110 182.743 63.097 1.00 62.07 C
ATOM 14 N9 A B1573 113.649 183.854 63.876 1.00 61.26 N
ATOM 15 C8 A B1573 114.274 184.995 63.438 1.00 61.28 C
ATOM 16 N7 A B1573 114.617 185.811 64.404 1.00 61.32 N
ATOM 17 C5 A B1573 114.197 185.162 65.556 1.00 60.24 C
ATOM 18 C6 A B1573 114.265 185.507 66.916 1.00 59.20 C
ATOM 19 N6 A B1573 114.811 186.637 67.370 1.00 59.04 N
ATOM 20 N1 A B1573 113.747 184.638 67.810 1.00 60.06 N
ATOM 21 C2 A B1573 113.207 183.500 67.359 1.00 60.54 C
ATOM 22 N3 A B1573 113.087 183.062 66.110 1.00 60.63 N
ATOM 23 C4 A B1573 113.605 183.952 65.246 1.00 60.99 C
ATOM 24 P A B1574 109.716 183.689 60.006 1.00 58.96 P
ATOM 25 OP1 A B1574 108.877 183.115 58.926 1.00 59.18 O
ATOM 26 OP2 A B1574 110.189 185.093 59.897 1.00 58.44 O
ATOM 27 O5' A B1574 108.906 183.572 61.373 1.00 57.48 O
TER
ATOM 2 P C A1602 106.211 176.796 65.119 1.00 52.40 P
ATOM 3 OP1 C A1602 106.344 176.274 63.734 1.00 51.58 O
ATOM 4 OP2 C A1602 106.208 175.849 66.264 1.00 51.34 O
ATOM 5 O5' C A1602 107.389 177.841 65.353 1.00 53.46 O
ATOM 6 C5' C A1602 107.589 178.942 64.447 1.00 53.26 C
ATOM 7 C4' C A1602 108.824 179.717 64.831 1.00 53.32 C
ATOM 8 O4' C A1602 108.636 180.348 66.125 1.00 53.54 O
ATOM 9 C3' C A1602 110.077 178.885 65.019 1.00 53.29 C
ATOM 10 O3' C A1602 110.679 178.578 63.778 1.00 52.66 O
ATOM 11 C2' C A1602 110.936 179.795 65.881 1.00 53.29 C
ATOM 12 O2' C A1602 111.531 180.832 65.128 1.00 53.06 O
ATOM 13 C1' C A1602 109.881 180.399 66.812 1.00 53.85 C
ATOM 14 N1 C A1602 109.742 179.697 68.104 1.00 55.03 N
ATOM 15 C2 C A1602 110.754 179.837 69.064 1.00 55.86 C
ATOM 16 O2 C A1602 111.742 180.536 68.801 1.00 57.42 O
ATOM 17 N3 C A1602 110.626 179.210 70.255 1.00 56.18 N
ATOM 18 C4 C A1602 109.543 178.474 70.507 1.00 55.63 C
ATOM 19 N4 C A1602 109.450 177.886 71.702 1.00 54.94 N
ATOM 20 C5 C A1602 108.505 178.309 69.549 1.00 55.54 C
ATOM 21 C6 C A1602 108.644 178.929 68.373 1.00 54.68 C
ATOM 22 P U A1603 111.502 177.214 63.623 1.00 53.88 P
ATOM 23 OP1 U A1603 111.992 177.128 62.220 1.00 52.99 O
ATOM 24 OP2 U A1603 110.682 176.109 64.187 1.00 55.00 O
ATOM 25 O5' U A1603 112.760 177.446 64.566 1.00 53.27 O
TER
ATOM 1 O3' G B1572 116.322 182.126 57.582 1.00 64.05 O
ATOM 2 P A B1573 114.984 183.022 57.554 1.00 65.04 P
ATOM 3 OP1 A B1573 113.990 182.255 56.761 1.00 65.33 O
ATOM 4 OP2 A B1573 115.338 184.403 57.137 1.00 66.76 O
ATOM 5 O5' A B1573 114.488 183.044 59.071 1.00 63.20 O
ATOM 6 C5' A B1573 114.064 181.815 59.677 1.00 64.61 C
ATOM 7 C4' A B1573 113.211 182.041 60.910 1.00 63.79 C
ATOM 8 O4' A B1573 114.005 182.414 62.054 1.00 63.58 O
ATOM 9 C3' A B1573 112.100 183.077 60.963 1.00 61.87 C
ATOM 10 O3' A B1573 110.968 182.686 60.181 1.00 59.75 O
ATOM 11 C2' A B1573 111.741 183.004 62.450 1.00 62.53 C
ATOM 12 O2' A B1573 110.930 181.877 62.734 1.00 62.97 O
ATOM 13 C1' A B1573 113.110 182.743 63.097 1.00 62.07 C
ATOM 14 N9 A B1573 113.649 183.854 63.876 1.00 61.26 N
ATOM 15 C8 A B1573 114.274 184.995 63.438 1.00 61.28 C
ATOM 16 N7 A B1573 114.617 185.811 64.404 1.00 61.32 N
ATOM 17 C5 A B1573 114.197 185.162 65.556 1.00 60.24 C
ATOM 18 C6 A B1573 114.265 185.507 66.916 1.00 59.20 C
ATOM 19 N6 A B1573 114.811 186.637 67.370 1.00 59.04 N
ATOM 20 N1 A B1573 113.747 184.638 67.810 1.00 60.06 N
ATOM 21 C2 A B1573 113.207 183.500 67.359 1.00 60.54 C
ATOM 22 N3 A B1573 113.087 183.062 66.110 1.00 60.63 N
ATOM 23 C4 A B1573 113.605 183.952 65.246 1.00 60.99 C
ATOM 24 P A B1574 109.716 183.689 60.006 1.00 58.96 P
ATOM 25 OP1 A B1574 108.877 183.115 58.926 1.00 59.18 O
ATOM 26 OP2 A B1574 110.189 185.093 59.897 1.00 58.44 O
ATOM 27 O5' A B1574 108.906 183.572 61.373 1.00 57.48 O
TER
Atoms:
C2: (110.754,179.837,69.064)
OP1: (106.344,176.274,63.734)
OP2: (106.208,175.849,66.264)
C4: (109.543,178.474,70.507)
O5': (107.389,177.841,65.353)
C3': (110.077,178.885,65.019)
C1': (109.881,180.399,66.812)
O4': (108.636,180.348,66.125)
C5': (107.589,178.942,64.447)
P: (106.211,176.796,65.119)
O2: (111.742,180.536,68.801)
C4': (108.824,179.717,64.831)
C2': (110.936,179.795,65.881)
O2': (111.531,180.832,65.128)
N1: (109.742,179.697,68.104)
N3: (110.626,179.210,70.255)
N4: (109.450,177.886,71.702)
C6: (108.644,178.929,68.373)
C5: (108.505,178.309,69.549)
O3': (110.679,178.578,63.778)
OP1: (106.344,176.274,63.734)
OP2: (106.208,175.849,66.264)
C4: (109.543,178.474,70.507)
O5': (107.389,177.841,65.353)
C3': (110.077,178.885,65.019)
C1': (109.881,180.399,66.812)
O4': (108.636,180.348,66.125)
C5': (107.589,178.942,64.447)
P: (106.211,176.796,65.119)
O2: (111.742,180.536,68.801)
C4': (108.824,179.717,64.831)
C2': (110.936,179.795,65.881)
O2': (111.531,180.832,65.128)
N1: (109.742,179.697,68.104)
N3: (110.626,179.210,70.255)
N4: (109.450,177.886,71.702)
C6: (108.644,178.929,68.373)
C5: (108.505,178.309,69.549)
O3': (110.679,178.578,63.778)
OP1: (113.990,182.255,56.761)
OP2: (115.338,184.403,57.137)
C3': (112.100,183.077,60.963)
C1': (113.110,182.743,63.097)
C5': (114.064,181.815,59.677)
O4': (114.005,182.414,62.054)
C8: (114.274,184.995,63.438)
O2': (110.930,181.877,62.734)
C6: (114.265,185.507,66.916)
C5: (114.197,185.162,65.556)
C4: (113.605,183.952,65.246)
P: (114.984,183.022,57.554)
C4': (113.211,182.041,60.910)
C2': (111.741,183.004,62.450)
C2: (113.207,183.500,67.359)
N1: (113.747,184.638,67.810)
N3: (113.087,183.062,66.110)
N6: (114.811,186.637,67.370)
N7: (114.617,185.811,64.404)
N9: (113.649,183.854,63.876)
O5': (114.488,183.044,59.071)
O3': (110.968,182.686,60.181)
OP2: (115.338,184.403,57.137)
C3': (112.100,183.077,60.963)
C1': (113.110,182.743,63.097)
C5': (114.064,181.815,59.677)
O4': (114.005,182.414,62.054)
C8: (114.274,184.995,63.438)
O2': (110.930,181.877,62.734)
C6: (114.265,185.507,66.916)
C5: (114.197,185.162,65.556)
C4: (113.605,183.952,65.246)
P: (114.984,183.022,57.554)
C4': (113.211,182.041,60.910)
C2': (111.741,183.004,62.450)
C2: (113.207,183.500,67.359)
N1: (113.747,184.638,67.810)
N3: (113.087,183.062,66.110)
N6: (114.811,186.637,67.370)
N7: (114.617,185.811,64.404)
N9: (113.649,183.854,63.876)
O5': (114.488,183.044,59.071)
O3': (110.968,182.686,60.181)
Image (generated by PyMOL):