Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A459:A463
Extra
PDB:
ATOM 1 O3' C A 458 -13.286 167.283 199.266 1.00 0.79 O
ATOM 2 P C A 459 -12.596 166.070 200.069 1.00 10.28 P
ATOM 3 OP1 C A 459 -13.692 165.133 200.462 1.00 10.28 O
ATOM 4 OP2 C A 459 -11.656 166.572 201.113 1.00 10.28 O
ATOM 5 O5' C A 459 -11.667 165.388 198.975 1.00 1.33 O
ATOM 6 C5' C A 459 -12.174 164.404 198.068 1.00 1.33 C
ATOM 7 C4' C A 459 -11.052 163.510 197.645 1.00 1.33 C
ATOM 8 O4' C A 459 -10.073 164.307 196.954 1.00 1.33 O
ATOM 9 C3' C A 459 -10.295 162.894 198.804 1.00 1.33 C
ATOM 10 O3' C A 459 -10.901 161.693 199.200 1.00 1.33 O
ATOM 11 C2' C A 459 -8.910 162.659 198.233 1.00 1.33 C
ATOM 12 O2' C A 459 -8.774 161.420 197.559 1.00 1.33 O
ATOM 13 C1' C A 459 -8.775 163.831 197.257 1.00 1.33 C
ATOM 14 N1 C A 459 -7.971 164.942 197.795 1.00 10.02 N
ATOM 15 C2 C A 459 -6.594 164.961 197.547 1.00 10.02 C
ATOM 16 O2 C A 459 -6.088 164.031 196.907 1.00 10.02 O
ATOM 17 N3 C A 459 -5.851 165.988 198.014 1.00 10.02 N
ATOM 18 C4 C A 459 -6.435 166.960 198.709 1.00 10.02 C
ATOM 19 N4 C A 459 -5.684 167.962 199.134 1.00 10.02 N
ATOM 20 C5 C A 459 -7.825 166.952 198.996 1.00 10.02 C
ATOM 21 C6 C A 459 -8.550 165.937 198.521 1.00 10.02 C
ATOM 22 P G A 460 -10.888 161.273 200.733 1.00 15.97 P
ATOM 23 OP1 G A 460 -11.769 160.085 200.839 1.00 32.50 O
ATOM 24 OP2 G A 460 -11.174 162.476 201.557 1.00 32.63 O
ATOM 25 O5' G A 460 -9.376 160.829 200.970 1.00 6.45 O
TER
ATOM 1 O3' U B 462 -8.844 153.151 193.164 1.00 5.63 O
ATOM 2 P A B 463 -8.781 154.484 192.282 1.00 0.79 P
ATOM 3 OP1 A B 463 -9.966 154.433 191.395 1.00 0.79 O
ATOM 4 OP2 A B 463 -7.431 154.613 191.702 1.00 0.79 O
ATOM 5 O5' A B 463 -8.993 155.664 193.327 1.00 0.79 O
ATOM 6 C5' A B 463 -10.268 155.899 193.957 1.00 0.79 C
ATOM 7 C4' A B 463 -10.203 157.169 194.765 1.00 0.79 C
ATOM 8 O4' A B 463 -9.155 157.049 195.767 1.00 0.79 O
ATOM 9 C3' A B 463 -9.813 158.403 193.973 1.00 0.79 C
ATOM 10 O3' A B 463 -10.947 159.013 193.366 1.00 0.79 O
ATOM 11 C2' A B 463 -9.197 159.309 195.029 1.00 0.79 C
ATOM 12 O2' A B 463 -10.196 160.006 195.736 1.00 0.79 O
ATOM 13 C1' A B 463 -8.560 158.307 195.987 1.00 0.79 C
ATOM 14 N9 A B 463 -7.110 158.199 195.854 1.00 0.79 N
ATOM 15 C8 A B 463 -6.348 157.157 195.394 1.00 0.79 C
ATOM 16 N7 A B 463 -5.054 157.398 195.401 1.00 0.79 N
ATOM 17 C5 A B 463 -4.964 158.681 195.903 1.00 0.79 C
ATOM 18 C6 A B 463 -3.877 159.510 196.141 1.00 0.79 C
ATOM 19 N6 A B 463 -2.622 159.149 195.924 1.00 0.79 N
ATOM 20 N1 A B 463 -4.119 160.741 196.622 1.00 0.79 N
ATOM 21 C2 A B 463 -5.387 161.098 196.857 1.00 0.79 C
ATOM 22 N3 A B 463 -6.505 160.400 196.676 1.00 0.79 N
ATOM 23 C4 A B 463 -6.219 159.186 196.189 1.00 0.79 C
ATOM 24 P G B 464 -10.737 159.973 192.097 1.00 0.79 P
ATOM 25 OP1 G B 464 -11.947 160.823 191.993 1.00 0.79 O
ATOM 26 OP2 G B 464 -10.270 159.180 190.916 1.00 0.79 O
ATOM 27 O5' G B 464 -9.530 160.907 192.523 1.00 3.80 O
TER
ATOM 2 P C A 459 -12.596 166.070 200.069 1.00 10.28 P
ATOM 3 OP1 C A 459 -13.692 165.133 200.462 1.00 10.28 O
ATOM 4 OP2 C A 459 -11.656 166.572 201.113 1.00 10.28 O
ATOM 5 O5' C A 459 -11.667 165.388 198.975 1.00 1.33 O
ATOM 6 C5' C A 459 -12.174 164.404 198.068 1.00 1.33 C
ATOM 7 C4' C A 459 -11.052 163.510 197.645 1.00 1.33 C
ATOM 8 O4' C A 459 -10.073 164.307 196.954 1.00 1.33 O
ATOM 9 C3' C A 459 -10.295 162.894 198.804 1.00 1.33 C
ATOM 10 O3' C A 459 -10.901 161.693 199.200 1.00 1.33 O
ATOM 11 C2' C A 459 -8.910 162.659 198.233 1.00 1.33 C
ATOM 12 O2' C A 459 -8.774 161.420 197.559 1.00 1.33 O
ATOM 13 C1' C A 459 -8.775 163.831 197.257 1.00 1.33 C
ATOM 14 N1 C A 459 -7.971 164.942 197.795 1.00 10.02 N
ATOM 15 C2 C A 459 -6.594 164.961 197.547 1.00 10.02 C
ATOM 16 O2 C A 459 -6.088 164.031 196.907 1.00 10.02 O
ATOM 17 N3 C A 459 -5.851 165.988 198.014 1.00 10.02 N
ATOM 18 C4 C A 459 -6.435 166.960 198.709 1.00 10.02 C
ATOM 19 N4 C A 459 -5.684 167.962 199.134 1.00 10.02 N
ATOM 20 C5 C A 459 -7.825 166.952 198.996 1.00 10.02 C
ATOM 21 C6 C A 459 -8.550 165.937 198.521 1.00 10.02 C
ATOM 22 P G A 460 -10.888 161.273 200.733 1.00 15.97 P
ATOM 23 OP1 G A 460 -11.769 160.085 200.839 1.00 32.50 O
ATOM 24 OP2 G A 460 -11.174 162.476 201.557 1.00 32.63 O
ATOM 25 O5' G A 460 -9.376 160.829 200.970 1.00 6.45 O
TER
ATOM 1 O3' U B 462 -8.844 153.151 193.164 1.00 5.63 O
ATOM 2 P A B 463 -8.781 154.484 192.282 1.00 0.79 P
ATOM 3 OP1 A B 463 -9.966 154.433 191.395 1.00 0.79 O
ATOM 4 OP2 A B 463 -7.431 154.613 191.702 1.00 0.79 O
ATOM 5 O5' A B 463 -8.993 155.664 193.327 1.00 0.79 O
ATOM 6 C5' A B 463 -10.268 155.899 193.957 1.00 0.79 C
ATOM 7 C4' A B 463 -10.203 157.169 194.765 1.00 0.79 C
ATOM 8 O4' A B 463 -9.155 157.049 195.767 1.00 0.79 O
ATOM 9 C3' A B 463 -9.813 158.403 193.973 1.00 0.79 C
ATOM 10 O3' A B 463 -10.947 159.013 193.366 1.00 0.79 O
ATOM 11 C2' A B 463 -9.197 159.309 195.029 1.00 0.79 C
ATOM 12 O2' A B 463 -10.196 160.006 195.736 1.00 0.79 O
ATOM 13 C1' A B 463 -8.560 158.307 195.987 1.00 0.79 C
ATOM 14 N9 A B 463 -7.110 158.199 195.854 1.00 0.79 N
ATOM 15 C8 A B 463 -6.348 157.157 195.394 1.00 0.79 C
ATOM 16 N7 A B 463 -5.054 157.398 195.401 1.00 0.79 N
ATOM 17 C5 A B 463 -4.964 158.681 195.903 1.00 0.79 C
ATOM 18 C6 A B 463 -3.877 159.510 196.141 1.00 0.79 C
ATOM 19 N6 A B 463 -2.622 159.149 195.924 1.00 0.79 N
ATOM 20 N1 A B 463 -4.119 160.741 196.622 1.00 0.79 N
ATOM 21 C2 A B 463 -5.387 161.098 196.857 1.00 0.79 C
ATOM 22 N3 A B 463 -6.505 160.400 196.676 1.00 0.79 N
ATOM 23 C4 A B 463 -6.219 159.186 196.189 1.00 0.79 C
ATOM 24 P G B 464 -10.737 159.973 192.097 1.00 0.79 P
ATOM 25 OP1 G B 464 -11.947 160.823 191.993 1.00 0.79 O
ATOM 26 OP2 G B 464 -10.270 159.180 190.916 1.00 0.79 O
ATOM 27 O5' G B 464 -9.530 160.907 192.523 1.00 3.80 O
TER
Atoms:
C2: (-6.594,164.961,197.547)
OP1: (-13.692,165.133,200.462)
OP2: (-11.656,166.572,201.113)
C4: (-6.435,166.960,198.709)
O5': (-11.667,165.388,198.975)
C3': (-10.295,162.894,198.804)
C1': (-8.775,163.831,197.257)
O4': (-10.073,164.307,196.954)
C5': (-12.174,164.404,198.068)
P: (-12.596,166.070,200.069)
O2: (-6.088,164.031,196.907)
C4': (-11.052,163.510,197.645)
C2': (-8.910,162.659,198.233)
O2': (-8.774,161.420,197.559)
N1: (-7.971,164.942,197.795)
N3: (-5.851,165.988,198.014)
N4: (-5.684,167.962,199.134)
C6: (-8.550,165.937,198.521)
C5: (-7.825,166.952,198.996)
O3': (-10.901,161.693,199.200)
OP1: (-13.692,165.133,200.462)
OP2: (-11.656,166.572,201.113)
C4: (-6.435,166.960,198.709)
O5': (-11.667,165.388,198.975)
C3': (-10.295,162.894,198.804)
C1': (-8.775,163.831,197.257)
O4': (-10.073,164.307,196.954)
C5': (-12.174,164.404,198.068)
P: (-12.596,166.070,200.069)
O2: (-6.088,164.031,196.907)
C4': (-11.052,163.510,197.645)
C2': (-8.910,162.659,198.233)
O2': (-8.774,161.420,197.559)
N1: (-7.971,164.942,197.795)
N3: (-5.851,165.988,198.014)
N4: (-5.684,167.962,199.134)
C6: (-8.550,165.937,198.521)
C5: (-7.825,166.952,198.996)
O3': (-10.901,161.693,199.200)
OP1: (-9.966,154.433,191.395)
OP2: (-7.431,154.613,191.702)
C3': (-9.813,158.403,193.973)
C1': (-8.560,158.307,195.987)
C5': (-10.268,155.899,193.957)
O4': (-9.155,157.049,195.767)
C8: (-6.348,157.157,195.394)
O2': (-10.196,160.006,195.736)
C6: (-3.877,159.510,196.141)
C5: (-4.964,158.681,195.903)
C4: (-6.219,159.186,196.189)
P: (-8.781,154.484,192.282)
C4': (-10.203,157.169,194.765)
C2': (-9.197,159.309,195.029)
C2: (-5.387,161.098,196.857)
N1: (-4.119,160.741,196.622)
N3: (-6.505,160.400,196.676)
N6: (-2.622,159.149,195.924)
N7: (-5.054,157.398,195.401)
N9: (-7.110,158.199,195.854)
O5': (-8.993,155.664,193.327)
O3': (-10.947,159.013,193.366)
OP2: (-7.431,154.613,191.702)
C3': (-9.813,158.403,193.973)
C1': (-8.560,158.307,195.987)
C5': (-10.268,155.899,193.957)
O4': (-9.155,157.049,195.767)
C8: (-6.348,157.157,195.394)
O2': (-10.196,160.006,195.736)
C6: (-3.877,159.510,196.141)
C5: (-4.964,158.681,195.903)
C4: (-6.219,159.186,196.189)
P: (-8.781,154.484,192.282)
C4': (-10.203,157.169,194.765)
C2': (-9.197,159.309,195.029)
C2: (-5.387,161.098,196.857)
N1: (-4.119,160.741,196.622)
N3: (-6.505,160.400,196.676)
N6: (-2.622,159.149,195.924)
N7: (-5.054,157.398,195.401)
N9: (-7.110,158.199,195.854)
O5': (-8.993,155.664,193.327)
O3': (-10.947,159.013,193.366)
Image (generated by PyMOL):